prot_M-pyrifera_M_contig110225.2142.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110225.2142.1
Unique Nameprot_M-pyrifera_M_contig110225.2142.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
BLAST of mRNA_M-pyrifera_M_contig110225.2142.1 vs. uniprot
Match: A0A7V2Y1E3_9BACT (PTS EIIA type-2 domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V2Y1E3_9BACT)

HSP 1 Score: 77.4 bits (189), Expect = 8.940e-16
Identity = 34/52 (65.38%), Postives = 49/52 (94.23%), Query Frame = 0
Query:    1 MLLTQYIAENCIVTDVEASNKADVLKELTNLLFDQKKLKGVGPALDQIMARE 52
            M+L++YIA+NCI+T+V A+NK+D +KELT+LLFD+KK+KG+G ALDQ++ARE
Sbjct:    1 MVLSKYIAKNCILTEVAAANKSDAIKELTHLLFDKKKMKGMGEALDQVVARE 52          
BLAST of mRNA_M-pyrifera_M_contig110225.2142.1 vs. uniprot
Match: A0A7C8AM12_9BACT (PTS transporter subunit EIIA n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7C8AM12_9BACT)

HSP 1 Score: 74.7 bits (182), Expect = 9.190e-15
Identity = 35/52 (67.31%), Postives = 47/52 (90.38%), Query Frame = 0
Query:    1 MLLTQYIAENCIVTDVEASNKADVLKELTNLLFDQKKLKGVGPALDQIMARE 52
            MLLT+YIA++CIV  ++A+NK D LKELT+LLF++K++K VGPALDQI+ARE
Sbjct:    1 MLLTKYIAKSCIVPRMKATNKPDALKELTHLLFEKKRMKSVGPALDQIVARE 52          
BLAST of mRNA_M-pyrifera_M_contig110225.2142.1 vs. uniprot
Match: A0A1V6EZ61_9BACT (PTS system fructose-specific EIIABC component n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin101 TaxID=1852847 RepID=A0A1V6EZ61_9BACT)

HSP 1 Score: 70.9 bits (172), Expect = 2.550e-13
Identity = 34/52 (65.38%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MLLTQYIAENCIVTDVEASNKADVLKELTNLLFDQKKLKGVGPALDQIMARE 52
            M++T YIAENCI+ ++    K + LKELT+LLFD KKLKGV  ALDQIMARE
Sbjct:    1 MVITDYIAENCILPEMRGKTKPEALKELTHLLFDAKKLKGVDAALDQIMARE 52          
BLAST of mRNA_M-pyrifera_M_contig110225.2142.1 vs. uniprot
Match: A0A1V5YYL7_9BACT (PTS system fructose-specific EIIABC component n=1 Tax=Candidatus Hydrogenedentes bacterium ADurb.Bin170 TaxID=1852848 RepID=A0A1V5YYL7_9BACT)

HSP 1 Score: 63.2 bits (152), Expect = 1.800e-10
Identity = 30/52 (57.69%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MLLTQYIAENCIVTDVEASNKADVLKELTNLLFDQKKLKGVGPALDQIMARE 52
            MLLT Y++ +C++ +V+   KAD LKELT+LL   +KLKG+  ALDQIMARE
Sbjct:    1 MLLTDYLSADCVLPEVQTKIKADALKELTDLLIKNRKLKGLEAALDQIMARE 52          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110225.2142.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A7V2Y1E3_9BACT8.940e-1665.38PTS EIIA type-2 domain-containing protein n=1 Tax=... [more]
A0A7C8AM12_9BACT9.190e-1567.31PTS transporter subunit EIIA n=1 Tax=Candidatus Hy... [more]
A0A1V6EZ61_9BACT2.550e-1365.38PTS system fructose-specific EIIABC component n=1 ... [more]
A0A1V5YYL7_9BACT1.800e-1057.69PTS system fructose-specific EIIABC component n=1 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR016152Phosphotransferase/anion transporterGENE3D3.40.930.10coord: 1..52
e-value: 3.7E-5
score: 25.4
IPR016152Phosphotransferase/anion transporterSUPERFAMILY55804Phoshotransferase/anion transport proteincoord: 1..52
IPR002178PTS EIIA type-2 domainPROSITEPS51094PTS_EIIA_TYPE_2coord: 5..52
score: 10.089

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110225contigM-pyrifera_M_contig110225:444..599 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110225.2142.1mRNA_M-pyrifera_M_contig110225.2142.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110225 441..599 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110225.2142.1 ID=prot_M-pyrifera_M_contig110225.2142.1|Name=mRNA_M-pyrifera_M_contig110225.2142.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
MLLTQYIAENCIVTDVEASNKADVLKELTNLLFDQKKLKGVGPALDQIMA
RE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR016152PTrfase/Anion_transptr
IPR002178PTS_EIIA_type-2_dom