mRNA_M-pyrifera_M_contig110223.2141.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Match: UPI001F5FDCB8 (piggyBac transposable element-derived protein 3-like n=1 Tax=Hydra vulgaris TaxID=6087 RepID=UPI001F5FDCB8) HSP 1 Score: 68.9 bits (167), Expect = 3.160e-10 Identity = 58/173 (33.53%), Postives = 87/173 (50.29%), Query Frame = 1
Query: 91 NIGSEVRRWEWKLVSRVLHISKRSEDM--EHPE-DNFIKVRPMIDLLLRNCMANFDPGCSVAYDEATVGYSRRTNLLVRTKHKKVPSK--VQAWCMCDSETAYVWWFE-FCKDSLAYKADEPGLSKTQAALYRVSQTLVSGNWHIIFLDNHFTSSKMARLLLGEKCLIVGTWR 591
NI + +++ + R LH S S+ + HP D KVRP+I L+L+N + N S + DE + R+ L R K P K ++ W C V+ FE +C+ L K + PGL +YR++Q+L SG + IF DN+F+S + RLL + L V T R
Sbjct: 184 NIADVMTSKQFEKIKRYLHFSDNSKSLPSNHPNYDKLFKVRPLIQLILKN-IKNIPQEESHSIDEQILPTKGRSFL--RQYLPKKPHKWGIKVWARC-GVFGIVYDFETYCRKYLLNKDELPGLLMGGNVVYRLTQSLPSGVNYKIFFDNYFSSIDIFRLLKEKIFLAVATIR 352
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Match: A0A267GLC7_9PLAT (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Macrostomum lignano TaxID=282301 RepID=A0A267GLC7_9PLAT) HSP 1 Score: 64.3 bits (155), Expect = 1.240e-8 Identity = 48/189 (25.40%), Postives = 88/189 (46.56%), Query Frame = 1
Query: 40 LASFWEKEPLARAASASNIGSEVRRWEWKLVSRVLHISKRSEDMEHPEDNFIKVRPMIDLLLRNCMANFDPGCSVAYDEATVGYSRRTNLLVRTKHKKVPSKVQAWCMCDSETAYVWWF-----EFCKDSLAYKADEPGLSKTQAALYRVSQTLVSGNWHIIFLDNHFTSSKMARLLLGEKCLIVGTWR 591
++S+W ++P+ + S + + + R +K + L ++ E P K++P + L R C N+ P ++ DE V Y R K+ V+ +C+C+SET Y+W F E + GLS ++ + + + L+ N+++ F D+ FTS ++A LL + GT R
Sbjct: 160 ISSYWSQDPVFHCSFLS-MPNALSRDRFKQLLSCLRFYDCTDVQEGP---LAKIQPFLHQLQRVCSNNYMPRQHISVDETLVLYKGRLLFKQYIPTKRSRYGVKLYCLCESETGYLWNFAVHSTEHANAQFGLGLECGGLSISERIVAELCRELLHMNYNV-FTDSWFTSHRLAVWLLANGTRLTGTVR 343
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Match: UPI000C255108 (piggyBac transposable element-derived protein 4-like n=1 Tax=Leptinotarsa decemlineata TaxID=7539 RepID=UPI000C255108) HSP 1 Score: 60.8 bits (146), Expect = 1.710e-7 Identity = 54/182 (29.67%), Postives = 83/182 (45.60%), Query Frame = 1
Query: 49 FWEKEPLARAASASNIGSEVRRWEWKLVSRVLHISKRSEDMEHPEDNF---IKVRPMIDLLLRNCMANFDPGCSVAYDEATVGYSRRTNLLVRTKHKKVPSKVQAWCMCDSETAYVWWFEFCKDSLAYKADEPGLSKTQAALYRVSQTLVSGNWHIIFLDNHFTSSKMARLLLGEKCLIVGT 585
+W P + S++ S V+R+ W L+S V HI+ S + NF KVRP+IDLLLRN P VA DE+ + + R++L K V + W +CD ++ Y F D K P + + ++ L + + HI++ DN F S + L + VGT
Sbjct: 31 YWSSGPDLKDHYVSSLMS-VKRFSW-LLSHV-HINDNSAMPDRGSPNFDKLYKVRPLIDLLLRNFQRCLLPSQQVAIDESMIKFKGRSSLKQYMPKKPVKRGYKVWMLCD-KSGYCLKF----DIYTGKTSSPEKALGVRVITHLTVDLRNKD-HILYFDNFFNSVPLMEELKKQNIHAVGT 203
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Match: UPI001E689072 (piggyBac transposable element-derived protein 4-like n=1 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E689072) HSP 1 Score: 58.5 bits (140), Expect = 1.180e-6 Identity = 51/205 (24.88%), Postives = 91/205 (44.39%), Query Frame = 1
Query: 1 VGLWFLVHFGNVP-LASFWEKEPLARAASASNIGSEVRRWEWKLVSRVLHISKRSEDMEHPEDNFIKVRPMIDLLLRNCMANFDPGCSVAYDEATVGYSRRTNLLVRTKHKKVPSKVQAWCM----CDSETAYVWWFEFCKDSLAYKADEP---GLSKTQAALYRVSQTLVSGNWHIIFLDNHFTSSKMARLLLGEKCLIVGTWR 591
+G++ L P L +W+K+P+ NI R+ + R H + + + D KV+P+ID+++RNC P + DE+ V + R LL+R + P+K + + ++ YVW ++ Y +P L K + + + + L+ +I DN +TS +A+ LL K + GT R
Sbjct: 251 LGIYLLTGIIKFPTLECYWKKDPIFYHPLMHNIKMSYNRF--TAILRCWHFVDNTAERD-VNDRLYKVKPVIDIVMRNCRKLLSPKDCIVVDESMVPFQGR--LLIRQYN---PNKTHKYGLKIYKATTDDGYVWKYK------VYTGQDPQIANLDKPGSVVVELCEELLDQG-RMIIADNWYTSLPLAQYLLQRKTDLCGTLR 440
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Match: UPI001E68DFD8 (piggyBac transposable element-derived protein 4-like n=3 Tax=Maniola jurtina TaxID=191418 RepID=UPI001E68DFD8) HSP 1 Score: 58.5 bits (140), Expect = 1.210e-6 Identity = 51/205 (24.88%), Postives = 91/205 (44.39%), Query Frame = 1
Query: 1 VGLWFLVHFGNVP-LASFWEKEPLARAASASNIGSEVRRWEWKLVSRVLHISKRSEDMEHPEDNFIKVRPMIDLLLRNCMANFDPGCSVAYDEATVGYSRRTNLLVRTKHKKVPSKVQAWCM----CDSETAYVWWFEFCKDSLAYKADEP---GLSKTQAALYRVSQTLVSGNWHIIFLDNHFTSSKMARLLLGEKCLIVGTWR 591
+G++ L P L +W+K+P+ NI R+ + R H + + + D KV+P+ID+++RNC P + DE+ V + R LL+R + P+K + + ++ YVW ++ Y +P L K + + + + L+ +I DN +TS +A+ LL K + GT R
Sbjct: 251 LGIYLLTGIIKFPTLECYWKKDPIFYHPLMHNIKMSYNRF--TAILRCWHFVDNTAERD-VNDRLYKVKPVIDIVMRNCRKLLSPKDCIVVDESMVPFQGR--LLIRQYN---PNKTHKYGLKIYKATTDDGYVWKYK------VYTGQDPQIANLDKPGSVVVELCEELLDQG-RMIIADNWYTSLPLAQYLLQRKTDLCGTLR 440
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Match: A0A3S2NGQ2_CHISP (DDE_Tnp_1_7 domain-containing protein n=1 Tax=Chilo suppressalis TaxID=168631 RepID=A0A3S2NGQ2_CHISP) HSP 1 Score: 57.4 bits (137), Expect = 3.060e-6 Identity = 52/192 (27.08%), Postives = 87/192 (45.31%), Query Frame = 1
Query: 40 LASFWE-KEPLARAASASNIGSEVRRWEWKLVSRVLHISKRSEDMEH---PEDNFIKVRPMIDLLLRNCMANFDPGCSVAYDEATVGYSRRTNLLVRTKHKKVPSKVQAWCMCDSETAYVWWFEFCKDSLAYKADE-PGLSKTQAALYRVSQTLVSG---NWHIIFLDNHFTSSKMARLLLGEKCLIVGTWR 591
L S+W E + R + S R ++L+SR LH + +E++ + E K++P++D L + +D G +++ DE+ + N K +Q + +CDS + Y+W FE + + D PG + + LV G H I++DNHF S +AR+L VGT R
Sbjct: 371 LRSYWNCTEDICRTPGFAVYMSFKR---FQLLSRCLHFNNDAENINNLTPAEAKLSKIKPIVDHLNEKFQSLYDMGQNISLDESLTHWKGPPN-------KAAHVDIQTYEICDSRSGYLWRFEVHAGTHISEDDVIPG------QIPSLVLQLVRGLEHRGHTIWMDNHFNSPSLARVLKTRGFDCVGTLR 546
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Match: UPI001E1D5C07 (piggyBac transposable element-derived protein 4-like n=2 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1D5C07) HSP 1 Score: 54.3 bits (129), Expect = 3.230e-5 Identity = 43/189 (22.75%), Postives = 73/189 (38.62%), Query Frame = 1
Query: 40 LASFWEKEPLARAASASNIGSEVRRWEWKLVSRVLHISKRSEDMEHPE---DNFIKVRPMIDLLLRNCMANFDPGCSVAYDEATVGYSRRTNLLVRTKHKKVPSKVQAWCMCDSETAYVWWFEFCKDSLAY--KADEPGLSKTQAALYRVSQTLVSGNWHIIFLDNHFTSSKMARLLLGEKCLIVGTWR 591
L +W +P+ S I + R + +S+ H++ S + + D VRP+++ + N MAN+ P DEA +GY+ R K ++ W D YV D Y K + G + T + H ++ DN+FT+ + L + GT+R
Sbjct: 158 LDMYWSSDPMF---SPCGIKERMTRDRYDKISKYFHVADTSCNPARGQPGHDKLSHVRPILEAVRVNLMANYKPHRETTVDEAMIGYTGRLGFKQYVPMKPTKRGIKVWVRADPHNGYV------NDIQVYLGKENRDGDKGLGERVVMDLVTPILNRGHHVYCDNYFTTVGLFEELQQQGTYACGTFR 337
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Match: UPI000B93568B (piggyBac transposable element-derived protein 4-like n=1 Tax=Myzus persicae TaxID=13164 RepID=UPI000B93568B) HSP 1 Score: 53.5 bits (127), Expect = 5.270e-5 Identity = 44/182 (24.18%), Postives = 75/182 (41.21%), Query Frame = 1
Query: 49 FWEKEPLARAASASNIGSEVRRWEWKLVSRVLHISKRS---EDMEHPEDNFIKVRPMIDLLLRNCMANFDPGCSVAYDEATVGYSRRTNLLVRTKHKKVPSKVQAWCMCDSETAYVWWFEFCKDSLAYKADEPGLSKTQAALYRVSQTLVSGNWHIIFLDNHFTSSKMARLLLGEKCLIVGT 585
+W P SNI V R+ W L LH++ S + + D KVRP ++L+L+N A ++P VA DE+ + + R + K + + W + D + Y+W F D K+ + A + + + + ++ DN+FTS + L GT
Sbjct: 12 YWSSAPDLHDDYISNI-MPVNRFSWLLSH--LHLNDNSVIPKKGDADYDKLYKVRPFLNLILKNSQAVYNPNRIVAIDESMIKFKGRHSSKQYMPKKPIKRGYKVWALAD-KYGYLWNF----DVYTGKSGDTVEKNLGARVVKNLSAPLKNKNYFLYFDNYFTSYPLISYLKSNGIYACGT 185
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Match: A0A6G0VSW8_APHCR (PiggyBac transposable element-derived protein 4-like (Fragment) n=1 Tax=Aphis craccivora TaxID=307492 RepID=A0A6G0VSW8_APHCR) HSP 1 Score: 53.5 bits (127), Expect = 5.930e-5 Identity = 44/182 (24.18%), Postives = 76/182 (41.76%), Query Frame = 1
Query: 49 FWEKEPLARAASASNIGSEVRRWEWKLVSRVLHISKRSEDMEHPEDNF---IKVRPMIDLLLRNCMANFDPGCSVAYDEATVGYSRRTNLLVRTKHKKVPSKVQAWCMCDSETAYVWWFEFCKDSLAYKADEPGLSKTQAALYRVSQTLVSGNWHIIFLDNHFTSSKMARLLLGEKCLIVGT 585
+W P SNI V R+ W L LH++ S + + N+ KVRP ++L+L+N A ++P VA DE+ + + R + K + + W + D + Y+W F D K+ + A + + + + ++ DN+FTS + L GT
Sbjct: 245 YWSSAPDLHDDYVSNI-MPVNRFSWLLSH--LHLNDNSVIPKKGDANYDKLYKVRPFLNLILKNSQAVYNPNRIVAIDESMIKFKGRHSSKQYMPKKPIKRGYKVWALAD-KYGYLWNF----DVYTGKSGDTIEKNLGARVVKNLSAPLKNKNYFLYFDNYFTSYPLMSYLKSNGIYACGT 418 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110223.2141.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 9
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110223.2141.1 >prot_M-pyrifera_M_contig110223.2141.1 ID=prot_M-pyrifera_M_contig110223.2141.1|Name=mRNA_M-pyrifera_M_contig110223.2141.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=197bp VGLWFLVHFGNVPLASFWEKEPLARAASASNIGSEVRRWEWKLVSRVLHIback to top mRNA from alignment at M-pyrifera_M_contig110223:9..599+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110223.2141.1 ID=mRNA_M-pyrifera_M_contig110223.2141.1|Name=mRNA_M-pyrifera_M_contig110223.2141.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=591bp|location=Sequence derived from alignment at M-pyrifera_M_contig110223:9..599+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110223:9..599+ >mRNA_M-pyrifera_M_contig110223.2141.1 ID=mRNA_M-pyrifera_M_contig110223.2141.1|Name=mRNA_M-pyrifera_M_contig110223.2141.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1182bp|location=Sequence derived from alignment at M-pyrifera_M_contig110223:9..599+ (Macrocystis pyrifera P11B4 male)back to top |