mRNA_M-pyrifera_M_contig110204.2134.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110204.2134.1
Unique NamemRNA_M-pyrifera_M_contig110204.2134.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A397G932_9GLOM (Phospholipase D n=1 Tax=Diversispora epigaea TaxID=1348612 RepID=A0A397G932_9GLOM)

HSP 1 Score: 113 bits (282), Expect = 1.390e-26
Identity = 56/114 (49.12%), Postives = 74/114 (64.91%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTHPVHD------KGGEWIGHDYYNPTVKDFS 372
            A + V ++V+LY+EV   L L S+ ++  LE L  N+HV+RHP HG+  G L W+HHEKMVVVDR +A +GG+DL +GRYD   H V D      K   W G DY NP +KDF+
Sbjct:   92 AEQNVKIYVVLYKEVPQVLTLNSEHSQNHLEGLHENIHVLRHPDHGID-GTLFWAHHEKMVVVDRHLAFIGGLDLCFGRYDTGKHQVTDYSHLSHKLSVWPGQDYSNPRIKDFT 204          
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A397SRV6_9GLOM (Phospholipase n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397SRV6_9GLOM)

HSP 1 Score: 110 bits (275), Expect = 1.280e-25
Identity = 56/118 (47.46%), Postives = 77/118 (65.25%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTHPVHD---KGGE----WIGHDYYNPTVKDFSSKV 381
            A  G+ +++++Y+EV+ +LPL S   K+ LE L  N+ V RHP HG   G +LW+HHEK+VVVD R+A +GG+DL +GRYD  TH + D    G E    W G DY NP +KDF + V
Sbjct:  548 AEEGIIIYIVVYKEVKYSLPLDSYHTKKTLEGLHTNIRVQRHPDHGP-EGTMLWAHHEKIVVVDCRIAFIGGLDLCFGRYDTRTHELADWNPDGDEQPTIWPGQDYSNPRIKDFQNVV 664          
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A1D1XTW8_9ARAE (Phospholipase D n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XTW8_9ARAE)

HSP 1 Score: 108 bits (271), Expect = 4.260e-25
Identity = 54/113 (47.79%), Postives = 75/113 (66.37%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTHPV---HDKGGE---WIGHDYYNPTVKDF 369
            A +GV ++V+LY+E+  AL L S  +K  L+ L  N+ V RHP H +G G   W+HHEKM+VVDRR+A +GG+DL +GRYD S+H +   H+   +   W G DY NP +KDF
Sbjct:  100 AQQGVKIYVVLYKEMTQALTLDSGHSKHSLQNLDKNILVQRHPDHDLG-GTFFWAHHEKMIVVDRRIAFIGGLDLCFGRYDTSSHQLADFHESSKQYSIWPGQDYSNPRIKDF 211          
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A2Z6RV27_9GLOM (Phospholipase D n=1 Tax=Rhizophagus clarus TaxID=94130 RepID=A0A2Z6RV27_9GLOM)

HSP 1 Score: 108 bits (269), Expect = 7.930e-25
Identity = 55/113 (48.67%), Postives = 71/113 (62.83%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTHPVHD------KGGEWIGHDYYNPTVKDF 369
            A  GV ++V+LY+E+  AL L S  +K  L+ L  N+ V RHP H +G G   W+HHEKMVVVDRR+A +GG+DL +GRYD S H + D          W G DY NP +KDF
Sbjct:  100 AEEGVKIYVVLYKEMAQALTLDSSHSKRSLQGLHKNILVQRHPDHDIG-GTFFWAHHEKMVVVDRRIAFIGGLDLCFGRYDTSAHQLADFHQYSKNISIWPGQDYSNPRIKDF 211          
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A1C7NG75_9FUNG (Phospholipase D n=1 Tax=Choanephora cucurbitarum TaxID=101091 RepID=A0A1C7NG75_9FUNG)

HSP 1 Score: 108 bits (269), Expect = 8.070e-25
Identity = 55/115 (47.83%), Postives = 75/115 (65.22%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTHPVHDKGGE------WIGHDYYNPTVKDFSS 375
            A  GV + +++Y+EVE+AL L S+  K+ L+ LS N+ V+RHP H +G G   WSHHEK VVVD R+A VGGIDL +GR+D   HP+ D  G       +IG DY +  V+DF +
Sbjct:  108 ADEGVKIFIVVYKEVELALTLDSRHTKDALQSLSENIVVLRHPNHDLG-GTFFWSHHEKFVVVDNRIAFVGGIDLCFGRWDTHGHPLADFNGNDPQSELFIGQDYSDARVRDFEN 221          
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A8H7S9E5_9FUNG (Phospholipase n=1 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7S9E5_9FUNG)

HSP 1 Score: 107 bits (268), Expect = 1.140e-24
Identity = 53/118 (44.92%), Postives = 77/118 (65.25%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKH-GVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTHPVHDKGGEWI------GHDYYNPTVKDFSSKV 381
            A  GV V++++Y+EVE ALP+ S+  K+ L++   N+ V RHP H  +    L WSHHEKMV+VD R+A +GG+DL YGR+D   H ++D  G+ +      G DY NP VKDF++ +
Sbjct:  676 AEEGVMVYIIVYKEVEAALPINSEHTKKHLQKQHPNIIVQRHPDHRSIDNTVLFWSHHEKMVIVDNRLAFIGGLDLCYGRWDTHEHKLNDLQGDHLLYEMVPGQDYSNPRVKDFNNVI 793          
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A2H5U9F3_RHIID (Phospholipase D n=7 Tax=Rhizophagus TaxID=1129544 RepID=A0A2H5U9F3_RHIID)

HSP 1 Score: 105 bits (262), Expect = 6.980e-24
Identity = 53/113 (46.90%), Postives = 72/113 (63.72%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTHPVHD------KGGEWIGHDYYNPTVKDF 369
            A +GV ++V+LY+E+  AL L S  +K  L+ L  N+ V RHP H +G G   W+HHEK+VVVDR+ A +GG+DL +GRYD S+H + D          W G DY NP +KDF
Sbjct:  101 AQQGVKIYVVLYKEMTQALTLDSSHSKRSLQGLDKNILVQRHPDHDLG-GTFFWAHHEKIVVVDRKTAFIGGLDLCFGRYDTSSHQLADFQQTSKNYSIWPGQDYSNPRIKDF 212          
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A397U189_9GLOM (Phospholipase D (Fragment) n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397U189_9GLOM)

HSP 1 Score: 105 bits (262), Expect = 7.140e-24
Identity = 52/115 (45.22%), Postives = 72/115 (62.61%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTHPVHDKGGE------WIGHDYYNPTVKDFSS 375
            A  GV +++++Y+EV +AL L S   K  L+ L  N+ V RHP HG+  G + W+HHEKMVVVD R+A +GG+DL +GRYD  +H + D          W G DY NP +KDF +
Sbjct:  318 AEEGVMIYIIVYKEVTVALTLDSHHTKFYLQSLHKNIKVQRHPDHGI-EGVMFWAHHEKMVVVDSRIAFIGGLDLCFGRYDTHSHELSDWPSNSDGPTIWPGQDYSNPRIKDFQN 431          
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A397TB08_9GLOM (Phospholipase n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397TB08_9GLOM)

HSP 1 Score: 105 bits (261), Expect = 9.910e-24
Identity = 52/115 (45.22%), Postives = 73/115 (63.48%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTH------PVHDKGGEWIGHDYYNPTVKDFSS 375
            A  GV ++++LY+EV++AL L S   K  L+ L  N+ V RHP HG   G + W+HHEKM+++D ++A +GG+DL +GRYD   H      P +D    W G DY NP VKDFS+
Sbjct:  456 AEEGVMIYIILYKEVKLALTLDSWHTKSCLQNLHHNIRVQRHPDHGPD-GTVFWAHHEKMLIIDCKIAFIGGLDLCFGRYDTHQHELVDFDPNNDNPSIWPGQDYSNPRVKDFSN 569          
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Match: A0A1Y1IAZ6_KLENI (Phospholipase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IAZ6_KLENI)

HSP 1 Score: 105 bits (261), Expect = 1.000e-23
Identity = 54/110 (49.09%), Postives = 74/110 (67.27%), Query Frame = 1
Query:   49 ATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLSVNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHSTHPVHDKGGE-WIGHDYYNPTVKDFSS 375
            A  GV V++L+Y+EV +AL + S  +K++L+ L  N+ VVRHP H   AG  LWSHHEK+VVVD R+A +GG+DL +GRYD   H + D     W G DYYNP  ++ +S
Sbjct:  488 ARAGVQVYILMYKEVSIALKINSLYSKKKLQALHENIKVVRHPDH-FSAGVYLWSHHEKIVVVDHRVAFLGGLDLCFGRYDTPEHSLGDLPATVWPGKDYYNPREREPNS 596          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110204.2134.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A397G932_9GLOM1.390e-2649.12Phospholipase D n=1 Tax=Diversispora epigaea TaxID... [more]
A0A397SRV6_9GLOM1.280e-2547.46Phospholipase n=1 Tax=Glomus cerebriforme TaxID=65... [more]
A0A1D1XTW8_9ARAE4.260e-2547.79Phospholipase D n=1 Tax=Anthurium amnicola TaxID=1... [more]
A0A2Z6RV27_9GLOM7.930e-2548.67Phospholipase D n=1 Tax=Rhizophagus clarus TaxID=9... [more]
A0A1C7NG75_9FUNG8.070e-2547.83Phospholipase D n=1 Tax=Choanephora cucurbitarum T... [more]
A0A8H7S9E5_9FUNG1.140e-2444.92Phospholipase n=1 Tax=Mucor circinatus TaxID=20541... [more]
A0A2H5U9F3_RHIID6.980e-2446.90Phospholipase D n=7 Tax=Rhizophagus TaxID=1129544 ... [more]
A0A397U189_9GLOM7.140e-2445.22Phospholipase D (Fragment) n=1 Tax=Gigaspora rosea... [more]
A0A397TB08_9GLOM9.910e-2445.22Phospholipase n=1 Tax=Glomus cerebriforme TaxID=65... [more]
A0A1Y1IAZ6_KLENI1.000e-2349.09Phospholipase n=1 Tax=Klebsormidium nitens TaxID=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110204contigM-pyrifera_M_contig110204:53..598 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score107.5
Seed ortholog evalue4.8e-21
Seed eggNOG ortholog588596.U9TGF3
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Phospholipase
EggNOG OGs38G6H@33154,3NX5P@4751,COG1502@1,KOG1329@2759
COG Functional cat.I
Best tax levelFungi
Best eggNOG OGNA|NA|NA
Exons3
Model size381
Cds size381
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110204.2134.1prot_M-pyrifera_M_contig110204.2134.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110204 53..598 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815613.040586-CDS-M-pyrifera_M_contig110204:52..1701622815613.040586-CDS-M-pyrifera_M_contig110204:52..170Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110204 53..170 -
1692277487.4680395-CDS-M-pyrifera_M_contig110204:52..1701692277487.4680395-CDS-M-pyrifera_M_contig110204:52..170Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110204 53..170 -
1622815613.0567596-CDS-M-pyrifera_M_contig110204:259..2881622815613.0567596-CDS-M-pyrifera_M_contig110204:259..288Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110204 260..288 -
1692277487.4788332-CDS-M-pyrifera_M_contig110204:259..2881692277487.4788332-CDS-M-pyrifera_M_contig110204:259..288Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110204 260..288 -
1622815613.070996-CDS-M-pyrifera_M_contig110204:364..5981622815613.070996-CDS-M-pyrifera_M_contig110204:364..598Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110204 365..598 -
1692277487.4863648-CDS-M-pyrifera_M_contig110204:364..5981692277487.4863648-CDS-M-pyrifera_M_contig110204:364..598Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110204 365..598 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110204.2134.1

>prot_M-pyrifera_M_contig110204.2134.1 ID=prot_M-pyrifera_M_contig110204.2134.1|Name=mRNA_M-pyrifera_M_contig110204.2134.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
ARAGRLLHLSQAIALAATRGVAVHVLLYQEVEMALPLQSKKAKEELEQLS
VNVHVVRHPKHGVGAGPLLWSHHEKMVVVDRRMAIVGGIDLAYGRYDHST
HPVHDKGGEWIGHDYYNPTVKDFSSKV
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mRNA from alignment at M-pyrifera_M_contig110204:53..598-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110204.2134.1 ID=mRNA_M-pyrifera_M_contig110204.2134.1|Name=mRNA_M-pyrifera_M_contig110204.2134.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=546bp|location=Sequence derived from alignment at M-pyrifera_M_contig110204:53..598- (Macrocystis pyrifera P11B4 male)
GCCCGTGCCGGCCGCCTGCTGCACCTGTCGCAAGCCATTGCCCTGGCTGC TACTCGGGGCGTAGCAGTGCACGTGCTCCTGTACCAGGAGGTGGAGATGG CGCTGCCGCTGCAGTCGAAGAAGGCCAAGGAGGAGCTGGAACAGCTGAGT GTCAACGTGCACGTGGTGCGACACCCCAAGCACGGCGTGGGCGCGGGGCC GCTGCTGTGGAGTCACCACGAGAAGATGGTGGTGGTGAGTGCTCCGTCGC GCTTGCGCACGCGCTGTGGACAGGAGATCCTCACCCCTCCTGTGTGTTCG CTCGCGTCAGGTGGACCGCCGTATGGCTATTGTTGGAGGGTACGCAGGAT GGTGGTTTGGGCGATACGTCCCTTCTTGCTGCGATCACATGCTCACACAC GCGCGCACTTGCATGTGCCGACGAGCAGAATTGACCTGGCATATGGAAGG TACGACCACTCGACTCACCCTGTGCACGATAAAGGTGGGGAGTGGATTGG CCATGACTACTACAACCCCACTGTGAAGGACTTCTCCTCCAAAGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig110204:53..598-

>mRNA_M-pyrifera_M_contig110204.2134.1 ID=mRNA_M-pyrifera_M_contig110204.2134.1|Name=mRNA_M-pyrifera_M_contig110204.2134.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=762bp|location=Sequence derived from alignment at M-pyrifera_M_contig110204:53..598- (Macrocystis pyrifera P11B4 male)
GCCCGTGCCGGCCGCCTGCTGCACCTGTCGCAAGCCATTGCCCTGGCTGC
TACTCGGGGCGTAGCAGTGCACGTGCTCCTGTACCAGGAGGTGGAGATGG
CGCTGCCGCTGCAGTCGAAGAAGGCCAAGGAGGAGCTGGAACAGCTGAGT
GTCAACGTGCACGTGGTGCGACACCCCAAGCACGGCGTGGGCGCGGGGCC
GCTGCTGTGGAGTCACCACGAGAAGATGGTGGTGGCCCGTGCCGGCCGCC
TGCTGCACCTGTCGCAAGCCATTGCCCTGGCTGCTACTCGGGGCGTAGCA
GTGCACGTGCTCCTGTACCAGGAGGTGGAGATGGCGCTGCCGCTGCAGTC
GAAGAAGGCCAAGGAGGAGCTGGAACAGCTGAGTGTCAACGTGCACGTGG
TGCGACACCCCAAGCACGGCGTGGGCGCGGGGCCGCTGCTGTGGAGTCAC
CACGAGAAGATGGTGGTGGTGGACCGCCGTATGGCTATTGTTGGAGGGTG
GACCGCCGTATGGCTATTGTTGGAGGAATTGACCTGGCATATGGAAGGTA
CGACCACTCGACTCACCCTGTGCACGATAAAGGTGGGGAGTGGATTGGCC
ATGACTACTACAACCCCACTGTGAAGGACTTCTCCTCCAAAGTGAATTGA
CCTGGCATATGGAAGGTACGACCACTCGACTCACCCTGTGCACGATAAAG
GTGGGGAGTGGATTGGCCATGACTACTACAACCCCACTGTGAAGGACTTC
TCCTCCAAAGTG
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