mRNA_M-pyrifera_M_contig110203.2133.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: A0A2E7C7L0_9GAMM (Acyl-CoA dehydrogenase n=7 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C7L0_9GAMM) HSP 1 Score: 391 bits (1004), Expect = 5.850e-134 Identity = 186/199 (93.47%), Postives = 196/199 (98.49%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
DSPAA+AMAPLR+IVK+KRLWAC IGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAH+GT DQKAR+LQPLLDG+IASCYSMTEPQAGADPAEFTCTATR+GDE VINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASI+LVEKGTPGM+ILRNSAVGPYVEQGDGVHAYIRFTNCRVPA+NL
Sbjct: 43 DSPAARAMAPLREIVKQKRLWACHIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHYGTPDQKARYLQPLLDGKIASCYSMTEPQAGADPAEFTCTATREGDEWVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIILVEKGTPGMDILRNSAVGPYVEQGDGVHAYIRFTNCRVPAENL 241
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: A0A4R5LV77_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A4R5LV77_9GAMM) HSP 1 Score: 380 bits (977), Expect = 7.580e-130 Identity = 181/199 (90.95%), Postives = 192/199 (96.48%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
+SPAAKAM PL+KIVKEKRLWAC IGPELGG+GYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGT +QKA++LQPLLDG+IASCYSMTEPQAGADPAEFTCTA RDGDE VINGEKWFASHARFSEFLLVMVVTNP VPIHEGASI+LVEKGTPGMEILRNSAVGPYVEQGDGVH YIRF++CRVPA+NL
Sbjct: 43 ESPAAKAMEPLKKIVKEKRLWACHIGPELGGEGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTPEQKAKYLQPLLDGKIASCYSMTEPQAGADPAEFTCTAVRDGDEWVINGEKWFASHARFSEFLLVMVVTNPHVPIHEGASIILVEKGTPGMEILRNSAVGPYVEQGDGVHGYIRFSDCRVPAENL 241
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: A0A2D8IUG2_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D8IUG2_9GAMM) HSP 1 Score: 377 bits (968), Expect = 1.760e-128 Identity = 178/199 (89.45%), Postives = 191/199 (95.98%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
DSPAAKAM PL++IVKEKRLWAC +GPELGG+GYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGT +QK ++LQPLLDG+IASCYSMTEPQAGADPAEFTCTATRDGDE VINGEKWFASHARFSEFLLVMVVTN +VPIHEGASI+LVEKGTPGMEI+RNSAVGP+VEQGDGV AY+RF NCRVPADNL
Sbjct: 43 DSPAAKAMEPLKQIVKEKRLWACHLGPELGGEGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTPEQKTKYLQPLLDGKIASCYSMTEPQAGADPAEFTCTATRDGDEWVINGEKWFASHARFSEFLLVMVVTNTEVPIHEGASIILVEKGTPGMEIIRNSAVGPFVEQGDGVRAYVRFNNCRVPADNL 241
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: A0A095VPR8_9GAMM (Butyryl-CoA dehydrogenase n=2 Tax=Halieaceae TaxID=1706372 RepID=A0A095VPR8_9GAMM) HSP 1 Score: 369 bits (948), Expect = 1.780e-125 Identity = 175/199 (87.94%), Postives = 189/199 (94.97%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
+SPAAKAMAPLR IVK+++LWAC +GPELGG+GYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGT +QKA+FLQPLLDG+IASCYSMTEP AGADPA+FTCTA RDGDE VINGEKWFASHA FSEFLLVMVVTN DVPIHEGASIVLVEKGTPG+EILRN+AVGPYVEQG GVH Y+RFTNCRVPA+NL
Sbjct: 43 ESPAAKAMAPLRDIVKKEKLWACHLGPELGGEGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTPEQKAKFLQPLLDGKIASCYSMTEPHAGADPAQFTCTAERDGDEWVINGEKWFASHASFSEFLLVMVVTNKDVPIHEGASIVLVEKGTPGLEILRNTAVGPYVEQGGGVHGYLRFTNCRVPAENL 241
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: A0A1X9NKX5_9GAMM (Acyl-CoA dehydrogenase n=1 Tax=Oceanicoccus sagamiensis TaxID=716816 RepID=A0A1X9NKX5_9GAMM) HSP 1 Score: 369 bits (946), Expect = 3.830e-125 Identity = 174/199 (87.44%), Postives = 191/199 (95.98%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
DSPAA AMAPL++IVKEKRLWAC +GPELGG+GYGQVKLGLMNEILGRSRF PSVFG QAPDSGNAEILAHFGTD QKA++LQPLLDG+IASCYSMTEPQAG+DPA+FTCTATRDGDE VINGEKWFASHARFSEFLLVMVVTN +VPIHEGASI+LVEKGTPGM+I+RN+AVGPYVEQG+GVH YIRFT+CRVPAD+L
Sbjct: 43 DSPAAAAMAPLKEIVKEKRLWACHLGPELGGEGYGQVKLGLMNEILGRSRFAPSVFGTQAPDSGNAEILAHFGTDHQKAKYLQPLLDGKIASCYSMTEPQAGSDPAQFTCTATRDGDEWVINGEKWFASHARFSEFLLVMVVTNTEVPIHEGASIILVEKGTPGMDIMRNTAVGPYVEQGNGVHGYIRFTDCRVPADHL 241
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: B7RTR6_9GAMM (Acyl-CoA dehydrogenase, C-terminal domain protein n=1 Tax=marine gamma proteobacterium HTCC2148 TaxID=247634 RepID=B7RTR6_9GAMM) HSP 1 Score: 365 bits (937), Expect = 8.600e-124 Identity = 172/199 (86.43%), Postives = 186/199 (93.47%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
DSPAA AMAPLR+IVK K LWAC +GPELGG GYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGT QK ++LQPLLDG+IASCYSMTEPQAG+DPAEFTCTATRDGDE VING+KWFASHARFSEFLLVMVVTN D PIHEGASI+LVEKGTPGM+I+RN+AVGP+VEQGDGVH YIRF NCR+PAD+L
Sbjct: 43 DSPAAAAMAPLREIVKAKGLWACHLGPELGGGGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTAQQKTKYLQPLLDGKIASCYSMTEPQAGSDPAEFTCTATRDGDEWVINGDKWFASHARFSEFLLVMVVTNTDAPIHEGASIILVEKGTPGMDIMRNTAVGPFVEQGDGVHGYIRFNNCRIPADHL 241
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: B8KQF7_9GAMM (FadE1_3 n=1 Tax=Luminiphilus syltensis NOR5-1B TaxID=565045 RepID=B8KQF7_9GAMM) HSP 1 Score: 365 bits (936), Expect = 1.180e-123 Identity = 177/199 (88.94%), Postives = 183/199 (91.96%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
+SPA KAMAPL+KIVKEK LWAC + ELGGQGYGQV LGLMNEILGRSRFGPSVFGCQAPDSGNAEILA FGTDDQKARFLQPLLDGEIASCYSMTEPQAG+DP EFTC A RDGDE VINGEKWFASHARFSEFLLVMVVT PD PIHEGASI+LVEK TPGMEILRNSAVGPYVEQGDGVH YIRFT+CRVP DNL
Sbjct: 43 NSPAFKAMAPLKKIVKEKGLWACHLEHELGGQGYGQVNLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAKFGTDDQKARFLQPLLDGEIASCYSMTEPQAGSDPGEFTCVAHRDGDEWVINGEKWFASHARFSEFLLVMVVTGPDKPIHEGASIILVEKDTPGMEILRNSAVGPYVEQGDGVHGYIRFTDCRVPIDNL 241
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: A0YD27_9GAMM (FadE1_3 n=1 Tax=marine gamma proteobacterium HTCC2143 TaxID=247633 RepID=A0YD27_9GAMM) HSP 1 Score: 361 bits (926), Expect = 4.140e-122 Identity = 171/199 (85.93%), Postives = 183/199 (91.96%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
+SPAA AMAPLR IVKEKRLWAC IGPELGG+GYGQV LGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTD QK ++LQPLLDG IASCYSMTEPQAG+DPA+FTC A R GDE VINGEKWFASHARFSEFLLVMVVT+ +VPIH GASI+LVEK TPGM+I+RNSAVGPY EQGDGVH YIRFTNCRVPAD+L
Sbjct: 43 ESPAAAAMAPLRAIVKEKRLWACHIGPELGGEGYGQVNLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDHQKKKYLQPLLDGNIASCYSMTEPQAGSDPAQFTCQAVRQGDEWVINGEKWFASHARFSEFLLVMVVTDTEVPIHRGASIILVEKNTPGMDIMRNSAVGPYAEQGDGVHGYIRFTNCRVPADHL 241
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: A0Z5T8_9GAMM (FadE1_3 n=3 Tax=unclassified Halieaceae TaxID=1706379 RepID=A0Z5T8_9GAMM) HSP 1 Score: 359 bits (922), Expect = 1.570e-121 Identity = 173/199 (86.93%), Postives = 184/199 (92.46%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
+SPAA AMAPLR+IVK KRLWAC + PELGGQGYGQV LGLMNEILGRSRFGPSVFGCQAPDSGNAEILA FGTDDQK RFL+PLL+ EIASCYSMTEPQAGADP EF CTATRDGDE VINGEKWFASHARFS FLLVMVVTNPDVPIH+GASI LVE+GTPGM+I+RNSAVGPYVEQGDGVHAYI F +CRVPA+NL
Sbjct: 43 NSPAAAAMAPLREIVKAKRLWACHLEPELGGQGYGQVALGLMNEILGRSRFGPSVFGCQAPDSGNAEILAKFGTDDQKERFLKPLLNAEIASCYSMTEPQAGADPGEFLCTATRDGDEWVINGEKWFASHARFSAFLLVMVVTNPDVPIHKGASIFLVEQGTPGMDIIRNSAVGPYVEQGDGVHAYIEFKDCRVPANNL 241
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Match: A0A2E9JKY7_9GAMM (Acyl-CoA dehydrogenase n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E9JKY7_9GAMM) HSP 1 Score: 357 bits (916), Expect = 3.100e-120 Identity = 168/199 (84.42%), Postives = 185/199 (92.96%), Query Frame = 1
Query: 1 DSPAAKAMAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHFGTDDQKARFLQPLLDGEIASCYSMTEPQAGADPAEFTCTATRDGDERVINGEKWFASHARFSEFLLVMVVTNPDVPIHEGASIVLVEKGTPGMEILRNSAVGPYVEQGDGVHAYIRFTNCRVPADNL 597
+SPAA+AMAPL++ VKEK LWAC +GPELGG GYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAH+GT +QK R+LQPLLDG+IASCYSMTEPQAGADPAEFTC A RDGDE VINGEKWFASHARF+EFLLVMVVTNPD IHEGASI+LVEKGTPG EILRN+AVGPY+E+GDGVH Y+RFT+CRVP+ NL
Sbjct: 66 NSPAARAMAPLQESVKEKNLWACHLGPELGGAGYGQVKLGLMNEILGRSRFGPSVFGCQAPDSGNAEILAHYGTPEQKERYLQPLLDGKIASCYSMTEPQAGADPAEFTCRAQRDGDEWVINGEKWFASHARFAEFLLVMVVTNPDRKIHEGASILLVEKGTPGFEILRNAAVGPYIERGDGVHGYLRFTDCRVPSSNL 264 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110203.2133.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110203.2133.1 >prot_M-pyrifera_M_contig110203.2133.1 ID=prot_M-pyrifera_M_contig110203.2133.1|Name=mRNA_M-pyrifera_M_contig110203.2133.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=192bp MAPLRKIVKEKRLWACPIGPELGGQGYGQVKLGLMNEILGRSRFGPSVFGback to top mRNA from alignment at M-pyrifera_M_contig110203:3..599- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110203.2133.1 ID=mRNA_M-pyrifera_M_contig110203.2133.1|Name=mRNA_M-pyrifera_M_contig110203.2133.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=597bp|location=Sequence derived from alignment at M-pyrifera_M_contig110203:3..599- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110203:3..599- >mRNA_M-pyrifera_M_contig110203.2133.1 ID=mRNA_M-pyrifera_M_contig110203.2133.1|Name=mRNA_M-pyrifera_M_contig110203.2133.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1152bp|location=Sequence derived from alignment at M-pyrifera_M_contig110203:3..599- (Macrocystis pyrifera P11B4 male)back to top |