mRNA_M-pyrifera_M_contig110126.2121.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig110126.2121.1
Unique NamemRNA_M-pyrifera_M_contig110126.2121.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A517RHN4_9PLAN (dTDP-3-amino-3,4, 6-trideoxy-alpha-D-glucopyranose n=20 Tax=Planctomycetaceae TaxID=126 RepID=A0A517RHN4_9PLAN)

HSP 1 Score: 388 bits (996), Expect = 2.640e-135
Identity = 181/200 (90.50%), Postives = 191/200 (95.50%), Query Frame = 1
Query:    1 ERIEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPSRQF 600
            E I+GHLYDYPKYYDLIFGDDWKAEFDFLQNCF+KHATRKVK +FEPACGTGRLLIKLAQAGYKVAGNDLN+HAI YCNDRLER GFPRSA +GDMSDFKLK+PVDAAFNTINSFRHLP+E AAENHLKCVA+AL PGGLYILGLHLTPT+GEPMQSESWSARRGNL INSHMQSI TDLKKRNEHLEMTFDVYTP+RQF
Sbjct:    2 ETIKGHLYDYPKYYDLIFGDDWKAEFDFLQNCFEKHATRKVKRVFEPACGTGRLLIKLAQAGYKVAGNDLNEHAINYCNDRLERAGFPRSAVIGDMSDFKLKKPVDAAFNTINSFRHLPTETAAENHLKCVADALAPGGLYILGLHLTPTEGEPMQSESWSARRGNLAINSHMQSIWTDLKKRNEHLEMTFDVYTPTRQF 201          
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A517ZBW5_9PLAN (Methyltransf_25 domain-containing protein n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZBW5_9PLAN)

HSP 1 Score: 305 bits (781), Expect = 1.480e-102
Identity = 141/200 (70.50%), Postives = 165/200 (82.50%), Query Frame = 1
Query:    1 ERIEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPSRQF 600
            E I+ +LYD+PKYYDL+FG DWKAEFDFL  CF+KHA R VK LFEPACGTGRLLIKLAQ+GY+VAGNDLN  A+ +CNDRLER GFPRSA +GDMSDFK +R  D+AFN INSFRHLPSE AAE H  C+A+A+  GGLY+LGLHLTPT+G   + E+WSARRGNL +NS+M S   D KKR+EHL MTFDVYTP++ F
Sbjct:    3 ETIDANLYDFPKYYDLVFGSDWKAEFDFLLTCFEKHAQRPVKRLFEPACGTGRLLIKLAQSGYEVAGNDLNPKAVDFCNDRLERFGFPRSAVVGDMSDFKTRRKYDSAFNMINSFRHLPSEEAAEGHFDCMADAVAKGGLYVLGLHLTPTRGPRSEEEAWSARRGNLTVNSYMWSKKLDRKKRDEHLGMTFDVYTPTQHF 202          
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A2D6SZ39_9PLAN (Methyltransferase type 11 n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D6SZ39_9PLAN)

HSP 1 Score: 304 bits (778), Expect = 4.230e-102
Identity = 141/195 (72.31%), Postives = 162/195 (83.08%), Query Frame = 1
Query:    1 ERIEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYT 585
            + IEGHLYDYPKYYDL+FG DWKAEFDFL+ CF KH  R VK LFEPACGTGRL+IKLAQA Y+++GNDLN HA+KYCNDRLER GF  +A +GDM+DF+LKR VDAAFN INSFRHLPSE AA++HL+CVA+AL  GGLYILGLHLTPT G+ +  ESWSARRGNL + SHM S   D+KKR E + M FDVYT
Sbjct:    3 QTIEGHLYDYPKYYDLVFGSDWKAEFDFLKRCFDKHMDRPVKRLFEPACGTGRLMIKLAQADYEISGNDLNAHAVKYCNDRLERHGFAPTACVGDMADFRLKRKVDAAFNMINSFRHLPSEKAAQSHLQCVADALAQGGLYILGLHLTPTVGDRVDEESWSARRGNLSVISHMWSAGIDMKKREERVGMRFDVYT 197          
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A3E0PYW1_9BACT (Class I SAM-dependent methyltransferase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PYW1_9BACT)

HSP 1 Score: 295 bits (755), Expect = 1.330e-98
Identity = 136/198 (68.69%), Postives = 165/198 (83.33%), Query Frame = 1
Query:    7 IEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPSRQF 600
            +  +LYD+PKYYDLIFG DWKAEFDFL   F+KH+ R V+ +FEPACGTGRLLIKLAQ GY+VAGNDLN  A+ YCNDRL+R GFPR+A +GDM+DFK+K+  DAAFN INSFRHLPSE AA +HL+CVA+AL  GGLY+LGLHLTPT+G  +++E+WSARRGNL +NS+M +   D K R EHL MTFD+YTP+RQF
Sbjct:    5 LNANLYDFPKYYDLIFGSDWKAEFDFLLEAFEKHSNRYVERIFEPACGTGRLLIKLAQHGYQVAGNDLNPKAVDYCNDRLKRFGFPRTATVGDMADFKVKKKFDAAFNMINSFRHLPSEKAAVSHLQCVADALARGGLYLLGLHLTPTEGNAIENEAWSARRGNLAVNSYMWTKKRDSKTRIEHLGMTFDIYTPTRQF 202          
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A1P8WBD2_9PLAN (Magnesium protoporphyrin O-methyltransferase n=1 Tax=Fuerstiella marisgermanici TaxID=1891926 RepID=A0A1P8WBD2_9PLAN)

HSP 1 Score: 288 bits (738), Expect = 5.110e-96
Identity = 133/197 (67.51%), Postives = 159/197 (80.71%), Query Frame = 1
Query:    1 ERIEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPS 591
            E I+G +YDYPKYYDL+FG DWKAEFDFL  CF KHA RKVK +FEPACGTGRLLIK+A++GY+V GNDLN  AI +CNDRLER G+PRS  + DM+DFK+K+  DAAFN IN+FRHLP+E AA++HL+C+A AL  GGLY LG+HL PTKGE M+ ESWSARRGNL I S+M     D KKR EHL +T D+YTP+
Sbjct:    3 ETIQGSIYDYPKYYDLLFGSDWKAEFDFLDACFPKHAGRKVKRVFEPACGTGRLLIKMAKSGYEVGGNDLNSKAIDFCNDRLERFGYPRSTVVEDMADFKVKKKFDAAFNLINTFRHLPTENAAQSHLECMAAALNKGGLYALGIHLDPTKGERMEEESWSARRGNLAITSYMWCKGLDRKKRMEHLGITLDIYTPT 199          
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A3B9D1D1_9PLAN (Class I SAM-dependent methyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A3B9D1D1_9PLAN)

HSP 1 Score: 287 bits (735), Expect = 1.460e-95
Identity = 134/198 (67.68%), Postives = 158/198 (79.80%), Query Frame = 1
Query:    1 ERIEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPSR 594
            E IEG +YD+PKYYDL+FG DWKAEFDF+Q CF+ +  +  K LFEPACGTGRLLIKLAQAGY+V+GNDLN+ AI +CNDRLER GF RS  + DMSDFK+K+  DAAFN IN+FRHLP+E AA  HL+C+A AL  GG+Y LG+HL PT GEPMQ ESWSARRGNL I S+M S   D KKR EHL +T D+YTP+R
Sbjct:    3 EIIEGSIYDFPKYYDLLFGSDWKAEFDFVQECFRDYGRKSTKRLFEPACGTGRLLIKLAQAGYEVSGNDLNEKAIDFCNDRLERFGFDRSTRVEDMSDFKVKKKYDAAFNLINTFRHLPTEKAAVAHLQCMAAALAKGGIYALGIHLEPTVGEPMQEESWSARRGNLGITSYMWSKGIDRKKRMEHLGVTLDIYTPTR 200          
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A2E3Z4P3_9PLAN (Class I SAM-dependent methyltransferase n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3Z4P3_9PLAN)

HSP 1 Score: 285 bits (730), Expect = 8.990e-95
Identity = 131/200 (65.50%), Postives = 156/200 (78.00%), Query Frame = 1
Query:    1 ERIEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPSRQF 600
            + I+G+LYDYPKYYDL++G DWKAEFDFL++ F+KH    V+ +FEPACGTGRLLI+ AQAGY V+GNDLN   I YCN RLER GF R+A +GDM DF+   P DAAFNTINSFRHL +E  A +HL CVA +LK  GLY+LGLHLTPTKGEP+  ESW+ARRGNL + S M     DLK R EH+ M+FDVYTP+RQF
Sbjct:    3 KTIQGNLYDYPKYYDLVYGSDWKAEFDFLEDSFEKHTDLVVRRIFEPACGTGRLLIRFAQAGYVVSGNDLNTQTIDYCNSRLERAGFARTAVVGDMCDFQCSEPADAAFNTINSFRHLATEKKARDHLLCVARSLKTDGLYVLGLHLTPTKGEPLAEESWAARRGNLSVLSRMWVTNRDLKDRQEHVGMSFDVYTPTRQF 202          
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A5B9QGG9_9BACT (dTDP-3-amino-3,4, 6-trideoxy-alpha-D-glucopyranose n=1 Tax=Bythopirellula goksoeyrii TaxID=1400387 RepID=A0A5B9QGG9_9BACT)

HSP 1 Score: 282 bits (722), Expect = 1.480e-93
Identity = 128/197 (64.97%), Postives = 159/197 (80.71%), Query Frame = 1
Query:   10 EGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPSRQF 600
            +  LYD+PKYYDL++G DWKAEFDFL  CF +HAT KVK +FEPACGTGRL++KLAQAG+KVAG DLN+ A+K+CNDRLER G+PRSA +GDM +F + +P DAAFN INSFRHL ++A AE HL  VA+ L+PGG+Y+LGLHLTPT  EPMQ ESWSARRGNL + S +     D ++R E + M+FDVYTP++QF
Sbjct:    6 QASLYDFPKYYDLVYGSDWKAEFDFLLECFAQHATGKVKRVFEPACGTGRLMVKLAQAGFKVAGVDLNEAAVKFCNDRLERSGYPRSAFVGDMCNFTVSKPFDAAFNPINSFRHLGTQAQAEQHLHTVAKHLRPGGIYVLGLHLTPTVVEPMQEESWSARRGNLAVLSRLWVTACDRRRRREEVGMSFDVYTPTKQF 202          
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A3B1DW13_9ZZZZ (Similar to N,N-dimethyltransferase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DW13_9ZZZZ)

HSP 1 Score: 281 bits (719), Expect = 5.330e-93
Identity = 128/200 (64.00%), Postives = 155/200 (77.50%), Query Frame = 1
Query:    1 ERIEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPSRQF 600
            E IEGHLYDYP YYDL+FG DWKAEFDFL+ CF+KH    VK LFEPACGTGRL++KLAQ GYK+AGNDLN HA+++CN+RLER  FP SA +GDM DF +K   DAAFN INSFRH+ +E  A+ HL+C+A  L+  GLY+LGLHLTPT+G     E W+ARRGNL +NSHM S   D++KR E + MTFDVYT ++ F
Sbjct:    3 EVIEGHLYDYPTYYDLVFGSDWKAEFDFLEACFEKHTNLTVKHLFEPACGTGRLMVKLAQRGYKIAGNDLNSHAVQFCNERLERRDFPPSAFVGDMCDFTVKEKYDAAFNMINSFRHIQTEQEAKAHLQCIANGLETSGLYLLGLHLTPTEGTHSDEERWTARRGNLVVNSHMWSEGVDMQKRVEQVGMTFDVYTLTKHF 202          
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Match: A0A2E7D637_9PLAN (Methyltransferase type 11 n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7D637_9PLAN)

HSP 1 Score: 280 bits (717), Expect = 9.090e-93
Identity = 134/200 (67.00%), Postives = 157/200 (78.50%), Query Frame = 1
Query:    1 ERIEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACGTGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFKLKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPTKGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPSRQF 600
            E I+G++YDYPKYYDL+F  DW+AEFDFL  CF++ A R VK LFEPACGTGRLLIK AQ+G+ V GNDLN  AI +CNDRLER GF RSA +GDMSDF+LK   DAAFNTINSFRHL +E  AE HLKC+A AL  GGLY+LGLHLTPT+G  +  ESWSARRGNL + S+M +   DLK R E+L MTFDVYT ++ F
Sbjct:    7 ETIDGNIYDYPKYYDLVFASDWRAEFDFLNLCFERFAKRPVKKLFEPACGTGRLLIKFAQSGFNVRGNDLNPKAIDFCNDRLERFGFGRSAIVGDMSDFRLKGKADAAFNTINSFRHLGTEKMAEAHLKCMANALAKGGLYLLGLHLTPTEGVGVDQESWSARRGNLMVVSNMWTKKVDLKVRREYLGMTFDVYTLTKHF 206          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110126.2121.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517RHN4_9PLAN2.640e-13590.50dTDP-3-amino-3,4, 6-trideoxy-alpha-D-glucopyranose... [more]
A0A517ZBW5_9PLAN1.480e-10270.50Methyltransf_25 domain-containing protein n=1 Tax=... [more]
A0A2D6SZ39_9PLAN4.230e-10272.31Methyltransferase type 11 n=1 Tax=Planctomycetacea... [more]
A0A3E0PYW1_9BACT1.330e-9868.69Class I SAM-dependent methyltransferase n=1 Tax=Pl... [more]
A0A1P8WBD2_9PLAN5.110e-9667.51Magnesium protoporphyrin O-methyltransferase n=1 T... [more]
A0A3B9D1D1_9PLAN1.460e-9567.68Class I SAM-dependent methyltransferase n=1 Tax=Pl... [more]
A0A2E3Z4P3_9PLAN8.990e-9565.50Class I SAM-dependent methyltransferase n=1 Tax=Pl... [more]
A0A5B9QGG9_9BACT1.480e-9364.97dTDP-3-amino-3,4, 6-trideoxy-alpha-D-glucopyranose... [more]
A0A3B1DW13_9ZZZZ5.330e-9364.00Similar to N,N-dimethyltransferase n=1 Tax=hydroth... [more]
A0A2E7D637_9PLAN9.090e-9367.00Methyltransferase type 11 n=1 Tax=Planctomycetacea... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110126contigM-pyrifera_M_contig110126:1..600 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score386.7
Seed ortholog evalue6.5e-105
Seed eggNOG ortholog344747.PM8797T_25995
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Methyltransferase domain
EggNOG OGs2IYVY@203682,COG0500@1,COG0500@2
COG Functional cat.Q
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size600
Cds size600
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815612.3178685-CDS-M-pyrifera_M_contig110126:0..6001622815612.3178685-CDS-M-pyrifera_M_contig110126:0..600Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110126 1..600 -
1692277487.1006868-CDS-M-pyrifera_M_contig110126:0..6001692277487.1006868-CDS-M-pyrifera_M_contig110126:0..600Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig110126 1..600 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110126.2121.1prot_M-pyrifera_M_contig110126.2121.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig110126 1..600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig110126.2121.1

>prot_M-pyrifera_M_contig110126.2121.1 ID=prot_M-pyrifera_M_contig110126.2121.1|Name=mRNA_M-pyrifera_M_contig110126.2121.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
ERIEGHLYDYPKYYDLIFGDDWKAEFDFLQNCFKKHATRKVKSLFEPACG
TGRLLIKLAQAGYKVAGNDLNQHAIKYCNDRLERGGFPRSAELGDMSDFK
LKRPVDAAFNTINSFRHLPSEAAAENHLKCVAEALKPGGLYILGLHLTPT
KGEPMQSESWSARRGNLQINSHMQSICTDLKKRNEHLEMTFDVYTPSRQF
back to top

mRNA from alignment at M-pyrifera_M_contig110126:1..600-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig110126.2121.1 ID=mRNA_M-pyrifera_M_contig110126.2121.1|Name=mRNA_M-pyrifera_M_contig110126.2121.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig110126:1..600- (Macrocystis pyrifera P11B4 male)
GAACGCATCGAAGGCCATCTCTATGACTATCCGAAATACTACGATCTGAT CTTTGGTGATGACTGGAAAGCGGAATTTGACTTTCTGCAGAACTGTTTTA AAAAACATGCCACACGCAAAGTCAAAAGCCTGTTCGAGCCTGCCTGCGGG ACTGGGCGACTGCTGATTAAACTGGCCCAGGCTGGTTACAAAGTCGCCGG CAATGATCTCAACCAGCATGCGATCAAATACTGCAATGATCGCCTGGAAC GCGGCGGTTTTCCCCGTTCTGCAGAACTGGGGGACATGTCTGACTTCAAA CTCAAACGCCCCGTGGATGCTGCTTTCAACACGATTAACAGCTTTCGTCA TCTGCCCAGTGAAGCCGCAGCTGAAAATCATCTGAAATGCGTGGCCGAGG CCCTGAAACCCGGAGGCCTGTATATCCTGGGACTGCATCTGACCCCCACC AAAGGGGAACCCATGCAGAGCGAGAGCTGGTCAGCGCGGAGAGGCAATCT GCAGATCAACTCACACATGCAGTCGATCTGTACGGATCTGAAAAAGCGGA ACGAACACCTCGAAATGACGTTCGACGTTTACACGCCGTCGCGCCAGTTT
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig110126:1..600-

>mRNA_M-pyrifera_M_contig110126.2121.1 ID=mRNA_M-pyrifera_M_contig110126.2121.1|Name=mRNA_M-pyrifera_M_contig110126.2121.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig110126:1..600- (Macrocystis pyrifera P11B4 male)
GAACGCATCGAAGGCCATCTCTATGACTATCCGAAATACTACGATCTGAT
CTTTGGTGATGACTGGAAAGCGGAATTTGACTTTCTGCAGAACTGTTTTA
AAAAACATGCCACACGCAAAGTCAAAAGCCTGTTCGAGCCTGCCTGCGGG
ACTGGGCGACTGCTGATTAAACTGGCCCAGGCTGGTTACAAAGTCGCCGG
CAATGATCTCAACCAGCATGCGATCAAATACTGCAATGATCGCCTGGAAC
GCGGCGGTTTTCCCCGTTCTGCAGAACTGGGGGACATGTCTGACTTCAAA
CTCAAACGCCCCGTGGATGCTGCTTTCAACACGATTAACAGCTTTCGTCA
TCTGCCCAGTGAAGCCGCAGCTGAAAATCATCTGAAATGCGTGGCCGAGG
CCCTGAAACCCGGAGGCCTGTATATCCTGGGACTGCATCTGACCCCCACC
AAAGGGGAACCCATGCAGAGCGAGAGCTGGTCAGCGCGGAGAGGCAATCT
GCAGATCAACTCACACATGCAGTCGATCTGTACGGATCTGAAAAAGCGGA
ACGAACACCTCGAAATGACGTTCGACGTTTACACGCCGTCGCGCCAGTTT
GAACGCATCGAAGGCCATCTCTATGACTATCCGAAATACTACGATCTGAT
CTTTGGTGATGACTGGAAAGCGGAATTTGACTTTCTGCAGAACTGTTTTA
AAAAACATGCCACACGCAAAGTCAAAAGCCTGTTCGAGCCTGCCTGCGGG
ACTGGGCGACTGCTGATTAAACTGGCCCAGGCTGGTTACAAAGTCGCCGG
CAATGATCTCAACCAGCATGCGATCAAATACTGCAATGATCGCCTGGAAC
GCGGCGGTTTTCCCCGTTCTGCAGAACTGGGGGACATGTCTGACTTCAAA
CTCAAACGCCCCGTGGATGCTGCTTTCAACACGATTAACAGCTTTCGTCA
TCTGCCCAGTGAAGCCGCAGCTGAAAATCATCTGAAATGCGTGGCCGAGG
CCCTGAAACCCGGAGGCCTGTATATCCTGGGACTGCATCTGACCCCCACC
AAAGGGGAACCCATGCAGAGCGAGAGCTGGTCAGCGCGGAGAGGCAATCT
GCAGATCAACTCACACATGCAGTCGATCTGTACGGATCTGAAAAAGCGGA
ACGAACACCTCGAAATGACGTTCGACGTTTACACGCCGTCGCGCCAGTTT
back to top