prot_M-pyrifera_M_contig110120.2120.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110120.2120.1
Unique Nameprot_M-pyrifera_M_contig110120.2120.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length80
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig110120.2120.1 vs. uniprot
Match: A0A7J7PFI3_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PFI3_9CHLO)

HSP 1 Score: 55.1 bits (131), Expect = 3.450e-7
Identity = 27/68 (39.71%), Postives = 43/68 (63.24%), Query Frame = 0 
Query:    2 TEEFMTAIGKDPVLSAGLADPHCLAAIDEYSKDAAGAAKKYGKDSKVNRFLQAFASAMGSHLETLGEK 69
            T + ++A+G DPVL+AG  DP  ++A+ E ++D + A KKY  ++KV RF  AF   M   L+  G++
Sbjct:  130 TPDTISAVGSDPVLTAGFDDPEVMSAVAEVARDPS-AIKKYANNAKVQRFYMAFGKLMDGKLQAAGKQ 196
[Close]
BLAST of mRNA_M-pyrifera_M_contig110120.2120.1 vs. uniprot
Match: A9VB89_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9VB89_MONBE)

HSP 1 Score: 52.8 bits (125), Expect = 3.610e-6
Identity = 27/71 (38.03%), Postives = 39/71 (54.93%), Query Frame = 0 
Query:    1 MTEEFMTAIGKDPVLSAGLADPHCLAAIDEYSKDAAGAAKKYGKDSKVNRFLQAFASAMGSHLETLGEKEE 71
            +T + +      P L   + DP    A+ E+  D A A KKYG + +V +F + +   MGSH ETLGEKE+
Sbjct:  157 LTPDLLQKFQSKPHLLKCMGDPTFQKALQEFQSDPATAKKKYGTNPEVAQFFKEYFEVMGSHFETLGEKED 227
[Close]
BLAST of mRNA_M-pyrifera_M_contig110120.2120.1 vs. uniprot
Match: A0A812TK43_9DINO (Sti1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812TK43_9DINO)

HSP 1 Score: 52.8 bits (125), Expect = 3.730e-6
Identity = 28/76 (36.84%), Postives = 38/76 (50.00%), Query Frame = 0 
Query:    1 MTEEFMTAIGKDPVLSAGLADPHCLAAIDEYSKDAAGAAKKYGKDSKVNRFLQAFASAMGSHLETLGEKEETSEEG 76
            MT +    I  +P L AG+++P C+AA+ E+      A  KY  D  +  FL  F   MG H   LGE E+ S  G
Sbjct:  141 MTPDLQQRIFSNPRLMAGMSNPKCMAALQEFQAKPEAAMAKYAADPLIRDFLTEFFGIMGDHFTKLGEAEKASSGG 216
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110120.2120.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A7J7PFI3_9CHLO3.450e-739.71Uncharacterized protein n=1 Tax=Scenedesmus sp. NR... [more]
A9VB89_MONBE3.610e-638.03Predicted protein n=1 Tax=Monosiga brevicollis Tax... [more]
A0A812TK43_9DINO3.730e-636.84Sti1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.260.100coord: 2..62
e-value: 6.7E-9
score: 37.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110120contigM-pyrifera_M_contig110120:97..336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110120.2120.1mRNA_M-pyrifera_M_contig110120.2120.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110120 91..336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110120.2120.1 ID=prot_M-pyrifera_M_contig110120.2120.1|Name=mRNA_M-pyrifera_M_contig110120.2120.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=80bp
MTEEFMTAIGKDPVLSAGLADPHCLAAIDEYSKDAAGAAKKYGKDSKVNR
FLQAFASAMGSHLETLGEKEETSEEGSGSG
back to top