mRNA_M-pyrifera_M_contig100999.212.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: A0A3D3SZT0_9GAMM (GMC family oxidoreductase n=3 Tax=Porticoccaceae bacterium TaxID=2026782 RepID=A0A3D3SZT0_9GAMM) HSP 1 Score: 296 bits (759), Expect = 1.260e-95 Identity = 137/209 (65.55%), Postives = 172/209 (82.30%), Query Frame = 1 Query: 1 VLLRSREA-GGLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDDTSPLIGGGGLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRFIE 624 +L SR+ GGL GMP+LG R+GTNGDY GYWDYN+ +DQT GLPTTGGVKL+GDD SP+IGGGG P+VDSYPLPK ++AR+KR IAGLGED M G+ + G+L++DY S IFAR ++TF EI ++TG KIYA KTP+TVHP+GGACLG S+++GVI +NGE+FD+PGLYV DAAALPR+PGGPPS+TIAAWA H+A++F + Sbjct: 298 ILFHSRDKRGGLVGMPQLGHRYGTNGDYLGYWDYNEPGLDQTCGLPTTGGVKLRGDDNSPMIGGGGFPSVDSYPLPKKLRARIKRGAFIAGLGEDIMNGQVSMGAGKLRVDYPFSLSSIFARTQATFDEIGKRTGRKIYAYKTPLTVHPSGGACLGSSVEDGVIGANGEIFDNPGLYVADAAALPRSPGGPPSITIAAWAEHIASQFAK 506
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: A0A2A5BZ04_9GAMM (Cholesterol oxidase n=1 Tax=Cellvibrionales bacterium TaxID=2026722 RepID=A0A2A5BZ04_9GAMM) HSP 1 Score: 289 bits (740), Expect = 1.040e-92 Identity = 132/198 (66.67%), Postives = 163/198 (82.32%), Query Frame = 1 Query: 25 GGLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDDTSPLIGGGGLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRF 618 G L GMP+LG+R+GTNGD+ G+WDYN+ + QT GLPTTGGVKLKGD+ +P++GGGG P+VDSYPLPK ++ R+KR IAGLGED M G T K G+LQI+Y S IFAR+R+ FAEI ++TG KIYAPKTPITVHPTGGACLG SI+ GV+ +NGEVFD+PGLYV DA+ALPR+PGGPP++TI AWA H+A+ F Sbjct: 313 GSLAGMPQLGKRYGTNGDHLGFWDYNQLGLYQTRGLPTTGGVKLKGDENAPMLGGGGFPSVDSYPLPKRIRERIKRGAFIAGLGEDVMNGTVTMKGGKLQIEYPHGTSSIFARIRAAFAEIEKRTGKKIYAPKTPITVHPTGGACLGSSIENGVVGANGEVFDNPGLYVADASALPRSPGGPPAITIGAWAEHIASEF 510
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: A0A496XMG5_9GAMM (GMC family oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496XMG5_9GAMM) HSP 1 Score: 286 bits (733), Expect = 9.960e-92 Identity = 135/207 (65.22%), Postives = 168/207 (81.16%), Query Frame = 1 Query: 1 VLLRSREA-GGLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDDTSPLIGGGGLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRF 618 +L SR+ GGL GMP+LG+R+GTNGDYFG+W+YN+ +DQT GLPTTGGV+LKGDD SP+IGGGG P+VDSYPLPK ++ +KR IAGLGED M G A+ +G+L++ + SPIFAR+R+ F EI ++TG KIY KTP+TVHPTGGACLG S + GVI +NGEVFD+ GLYV DAAALPR+PGGPPSMTIAAWA H+A++F Sbjct: 299 LLFHSRDVVGGLVGMPQLGQRYGTNGDYFGFWNYNEPSLDQTRGLPTTGGVQLKGDDGSPMIGGGGFPSVDSYPLPKRLRKWIKRGCFIAGLGEDAMNGTASMDRGKLKVSFPYGISPIFARIRTVFDEIGKRTGKKIYMFKTPLTVHPTGGACLGSSPENGVIGANGEVFDNEGLYVADAAALPRSPGGPPSMTIAAWAEHIASQF 505
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: A0A661GTF3_9GAMM (GMC family oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661GTF3_9GAMM) HSP 1 Score: 279 bits (713), Expect = 1.030e-88 Identity = 126/201 (62.69%), Postives = 162/201 (80.60%), Query Frame = 1 Query: 25 GGLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDDTSPLIGGGGLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRFIER 627 G L GMP+LG+R+GTNGD G+WDYN+ + QT GLPTTGGVKLKGD+ +P++GGGG P+VD+YPLPK ++ R+KR IAGLGED M G T K G+L+I+Y S IFAR R+ F EI ++TG KIYAPKTPITVHP GGACLG S+++GV+ +N E+FD+PG+YVTDA+ LPR+PGGPP++TI AWA HVA++F +R Sbjct: 308 GSLAGMPQLGKRYGTNGDNLGFWDYNQPGLYQTRGLPTTGGVKLKGDENAPMLGGGGFPSVDAYPLPKRIRERIKRGAFIAGLGEDVMNGTVTMKGGKLRIEYPHGTSSIFARTRAAFTEIEKRTGKKIYAPKTPITVHPMGGACLGSSVEDGVVGANDEIFDNPGVYVTDASVLPRSPGGPPAITIGAWAEHVASQFGKR 508
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: A0A3B8X9V2_9GAMM (GMC family oxidoreductase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3B8X9V2_9GAMM) HSP 1 Score: 225 bits (574), Expect = 7.830e-68 Identity = 104/214 (48.60%), Postives = 148/214 (69.16%), Query Frame = 1 Query: 1 VLLRSREAG-GLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDDTSP----LIGGGGLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRFIER 627 +LL+SR+ GL GMPRLG G NGDYF +WDYN D D + GLP GG +LK D +P ++GGGG PAV+ +PLP++++ R+KR A G++ G T++ G+L+++YNPD+SPI+ R+R T+ ++++ TG KIY P T+H GG C+GR + GV++ NGEVFD PGLYV D + +P A GGPP++TIAAWA+HV + E+ Sbjct: 300 LLLKSRDQDKGLKGMPRLGFHVGGNGDYFAFWDYNDPDRDLSTGLPFHGGFELKTGDETPDDPMVLGGGGWPAVEFWPLPRFIRERLKRTAFTASYGDEAQDGTVTWRGGKLRLNYNPDNSPIYGRIRRTWQKVSRLTGRKIYYLDKPFTIHALGGCCVGRDVSRGVVNGNGEVFDLPGLYVADGSVVPDALGGPPTLTIAAWADHVGEKLAEK 513
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: A0A1Y5F104_9GAMM (Uncharacterized protein n=1 Tax=Cycloclasticus sp. 44_32_T64 TaxID=1856282 RepID=A0A1Y5F104_9GAMM) HSP 1 Score: 219 bits (557), Expect = 2.290e-65 Identity = 109/213 (51.17%), Postives = 140/213 (65.73%), Query Frame = 1 Query: 1 VLLRSREAG-GLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDD-----TSPLIGGGGLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRFI 621 +LL+SRE GL GMP+LG+ FG+NGD F YW+ K D T LP G V+LK D T P I +P+ + LP W+ +M++ M+AG+GED M G + K G+L +DYNPD+S IF ++R IA+ T +I + K P TVHP GGAC+GR ++ GVID GEVFDHPGLYV DAAALP+ PP+MTIAAWANHVA + I Sbjct: 291 LLLQSREGEKGLGGMPQLGKSFGSNGDLFAYWNLQNKGQDMTQSLPVNGYVRLKNWDEENGATQPTIVETPMPSPNKLRLPSWLANKMRQGTMVAGMGEDAMDGTVSLKNGKLNVDYNPDNSSIFRQIRDQMDRIAKSTDKRILSFKRPTTVHPLGGACIGRDVNTGVIDDKGEVFDHPGLYVADAAALPKPVAAPPAMTIAAWANHVAEQLI 503
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: A0A661HDR3_9GAMM (GMC family oxidoreductase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A661HDR3_9GAMM) HSP 1 Score: 218 bits (555), Expect = 7.230e-65 Identity = 107/215 (49.77%), Postives = 145/215 (67.44%), Query Frame = 1 Query: 1 VLLRSREAG-GLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDDTS-----PLIGGGGLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRFIER 627 +LL SRE GL GMP LG+RFG+NGD+FGYWD+ K D + G V+L D+ + P+I LP D LP W+ ++++ IAG+G D G + KG+L+IDY P++SPIFA +R IA+ +G ++ + K P T HPTGGAC+G+++ EGV++ GEVFDHPGLYV DAAALP++ GGPPSMTIAAWA+HVA R I++ Sbjct: 291 LLLHSREGDKGLGGMPNLGQRFGSNGDFFGYWDHQDKLHDLSKSEGVNGFVRLTEDEGAAEGSIPMILETPLPNPDKLRLPGWIAKKLRQGTFIAGMGPDAQDGTVSLVKGKLKIDYQPENSPIFAAIRQQMDRIAKASGKRVLSIKRPTTAHPTGGACIGQNLSEGVVNEQGEVFDHPGLYVADAAALPKSVGGPPSMTIAAWADHVAERLIDK 505
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: A0A661ELB5_9GAMM (GMC_oxred_C domain-containing protein (Fragment) n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661ELB5_9GAMM) HSP 1 Score: 213 bits (542), Expect = 1.510e-63 Identity = 99/214 (46.26%), Postives = 142/214 (66.36%), Query Frame = 1 Query: 1 VLLRSREAGG-LTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDDTSP----LIGGGGLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRFIER 627 +LL+SR+ L+GMPRLG G NGDYF +WDYN D D + GLP GG +LK D P ++GGGG PAV+ +PLP++++ R+K A G++ G T+++G+L++ YNPD+SPI+ R+R+T+ +++Q TG KIY P T+H GG C+G D G+I+ GE+ D GLYV D +A+P + GGPP++TIAAWA HV + R Sbjct: 249 LLLKSRDQEHTLSGMPRLGFHLGGNGDYFAFWDYNDPDRDLSTGLPFHGGFELKEGDEDPDDPMVLGGGGWPAVEFWPLPRFIRNRLKHTAFTASYGDEAQDGTVTWRRGKLKLTYNPDNSPIYERIRNTWRKVSQLTGRKIYFLNKPFTIHTLGGCCVGEQADRGLINGEGEIHDQAGLYVADGSAVPDSLGGPPTLTIAAWAEHVGESLLAR 462
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: A0A254RBQ8_9RHOB (Uncharacterized protein n=1 Tax=Oceanicola sp. 22II-s10i TaxID=1317116 RepID=A0A254RBQ8_9RHOB) HSP 1 Score: 210 bits (534), Expect = 5.190e-62 Identity = 102/210 (48.57%), Postives = 146/210 (69.52%), Query Frame = 1 Query: 1 VLLRSREA-GGLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDDTSPLIGGG--GLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRFI 621 +LL SR+ GGL GMP LG+RF NGD G+WD N D D + G P+ G +K++ DD P +G G +P+V++YP P++++ R+KR +++G+GED M G AT + R +I ++P +SPI+A++ E+A+++G KIYA KTP TVHP GGAC+GR + GV+ +NGEV PGLYV DAAA PR PP+++I AWA +VA RF+ Sbjct: 294 LLLESRDRYGGLKGMPGLGKRFSGNGDIRGFWDLNDADRDYSEGTPSKGAIKMR-DDAFPQVGIGRNNMPSVNAYPFPRFLRERLKRGMVVSGMGEDAMDGVATSEGRRFRIRFDPKNSPIYAQIYEVMQEMARRSGRKIYAGKTPATVHPMGGACVGRPEEGGVVGANGEVHGVPGLYVVDAAAFPRPTAAPPTLSIGAWAENVAARFL 502
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Match: UPI002022F812 (GMC oxidoreductase n=1 Tax=Xanthobacter aminoxidans TaxID=186280 RepID=UPI002022F812) HSP 1 Score: 210 bits (534), Expect = 5.190e-62 Identity = 100/213 (46.95%), Postives = 146/213 (68.54%), Query Frame = 1 Query: 1 VLLRSREA-GGLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVKLKGDDTSPLIGGG--GLPAVDSYPLPKWVKARMKRAYMIAGLGEDNMTGRATFKKGRLQIDYNPDDSPIFARLRSTFAEIAQKTGHKIYAPKTPITVHPTGGACLGRSIDEGVIDSNGEVFDHPGLYVTDAAALPRAPGGPPSMTIAAWANHVATRFIERH 630 +LL+SR+ GGL GMP LG RF NGD G+WD N D D T G+P+ G ++L+ D++ P +G G +P+VD+YP P++V+ R+KR +++G+GED M G A+ GR +ID++P +SPI+ R+ E+A+ +G +YA + P TVHP GGACLGR GV+ ++GEV PGL+V DAAA PR PP+++I AWA +VA RF+ ++ Sbjct: 294 LLLQSRDVHGGLRGMPHLGRRFSGNGDIRGFWDLNTPDTDYTEGIPSKGAIRLR-DESRPQVGIGRNNMPSVDAYPFPRFVRQRLKRGMVVSGMGEDAMDGTASIAGGRFRIDFDPANSPIYGRIYEVMQEMARLSGRPVYAGRRPSTVHPMGGACLGRLEAVGVVGADGEVHGVPGLHVVDAAAFPRPTAAPPTLSIGAWAENVAARFLAKN 505 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100999.212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig100999.212.1 >prot_M-pyrifera_M_contig100999.212.1 ID=prot_M-pyrifera_M_contig100999.212.1|Name=mRNA_M-pyrifera_M_contig100999.212.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=214bp VLLRSREAGGLTGMPRLGERFGTNGDYFGYWDYNKKDVDQTIGLPTTGGVback to top mRNA from alignment at M-pyrifera_M_contig100999:32..673- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig100999.212.1 ID=mRNA_M-pyrifera_M_contig100999.212.1|Name=mRNA_M-pyrifera_M_contig100999.212.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=642bp|location=Sequence derived from alignment at M-pyrifera_M_contig100999:32..673- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig100999:32..673- >mRNA_M-pyrifera_M_contig100999.212.1 ID=mRNA_M-pyrifera_M_contig100999.212.1|Name=mRNA_M-pyrifera_M_contig100999.212.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1284bp|location=Sequence derived from alignment at M-pyrifera_M_contig100999:32..673- (Macrocystis pyrifera P11B4 male)back to top |