mRNA_M-pyrifera_M_contig11012.2119.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig11012.2119.1 vs. uniprot
Match: D8LAW7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAW7_ECTSI) HSP 1 Score: 282 bits (721), Expect = 6.840e-87 Identity = 244/398 (61.31%), Postives = 275/398 (69.10%), Query Frame = 1
Query: 1 QMGGVDTIAFDENDPSLMAELAELGWDDSGSGXXXXXXXXXRTAKVAKLPAGHRPLP-ASFGREDSAEDSGPPRRGQSGNDLLRSLGLSLNSLGEPELTEEDMQDPDLLNELGEVSGDPQFANASRRPSAGGEGGXXXXXXXXXXXXXXXXXXGSTVEADRESXXXG--------AELEEELVRTKLPALPPRKPSAAXXXXXXXXXXXXXXX------EIAKLEKEVEGLHQRAVDLKKAGDRPGALEAMRAARSANHELSVLRTLATATKVATVTTEYVAPETPAAPAVEEEAAPTXXXXXXXXXXXX----KPVSAELVMQQQVKILYQRAVELRKEGRTAEAMACLKRAKSLEADLLRDAQGKGLVTSGEREESGD-----GRRPSMSRQGSSR 1122
+M GVDT+AFDENDPSLMAELAELGW G XXXXXX A VA+ PAGHRP P A+ G + S PRR SGNDLLRSLGLSLNSLG+ ELTE+D+QD DLL ELGEVSG +F A+ +A GE G XX VE DRESXXX ELEEE + PALPPR+P++ XXXXXXXXXXXXXXX E+A+LE+E+E L RA++LKKAGDR GALEAMRAARSA+HEL+V+RTL TA KVATV TEYV P P+ E XXXXXXXXXXXX KPVSAELVM+Q VKILYQRA+EL+KEGR AEAMACLKRAKSLEADL R+AQGKGLV S E G+RPS RQ S+R
Sbjct: 39 KMSGVDTVAFDENDPSLMAELAELGW----GGDDSXXXXXXXXATVARPPAGHRPRPDAAPGGDGGLGPSAAPRREASGNDLLRSLGLSLNSLGDQELTEDDLQDADLLGELGEVSGGAEFDAAAPTNTAEGETGGEYEDDDXX----------EAVEPDRESXXXXXEEDMLALGELEEEPMVPAKPALPPRQPASXXXXXXXXXXXXXXXXXXAATGEMARLEQELEILRHRALELKKAGDRAGALEAMRAARSADHELAVMRTLETARKVATVRTEYVPP-----PSDEXXXXXXXXXXXXXXXXXXXXXXKPVSAELVMKQ-VKILYQRAIELKKEGRKAEAMACLKRAKSLEADLRREAQGKGLVGSSEETXXXXXXXXXGKRPSFVRQASAR 416
BLAST of mRNA_M-pyrifera_M_contig11012.2119.1 vs. uniprot
Match: A0A6H5JQ36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ36_9PHAE) HSP 1 Score: 280 bits (716), Expect = 3.170e-82 Identity = 254/470 (54.04%), Postives = 287/470 (61.06%), Query Frame = 1
Query: 1 QMGGVDTIAFDENDPSLMAELAELGWDDSGSGXXXXXXXXXRTAKVAKLPAGHRPLP-ASFGREDSAEDSGPPRRGQSGNDLLRSLGLSLNSLGEPELTEEDMQDPDLLNELGEVSGDPQFANASRRPSAGGEGGXXXXXXXXXXXXXXXXXXGSTVEADRESXXXGAELEEE----LVRTKLPALPPRKPSAAXXXXXXXXXXXXXXX-------------------------------EIAKLEKEVEGLHQRAVDLKKAGDRPGALEAMRAARSANHELSVLRTLATATKVATVTTEYVAPETPAAPAVEEEAAPTXXXXXXXXXXXX----KPVSAELVMQQQVKILYQRAVELRKEGRTAEAMACLKRAKSLEADLLRDAQGKGLVTSGEREESGDG----RRPSMSRQGSSRLAQGLGQTRGGGGXXXXXXXXXXXDSAVRKGSXXXXXXGLPPSVKEAMKPKV 1278
+M GVDTIAFDENDPSLMAELAELGW G XXXXXX A VA+ PAGHRP P A+ G + S P+R SGNDLLRSLGLSLNSLG+ ELTE+D+QDPDLL ELGEVSG F A+ + GE G VE DRES G+E+EEE L + A+PP XXXXXXXXXXXXXXX E+A+LE+E+E L RA++LKKAGDR GALEAMRAARSANHEL+V+RTL TA KVATV TEYV P P+ E XXXXXXXXXXXX KPVSAELVM+Q VK+LYQRA+EL+KEGR AEAMACLKRAKSLEADL R+AQGKGLV S E EE+G+G +RPS RQ S+R + SA R S GLPPS K A KPKV
Sbjct: 39 KMSGVDTIAFDENDPSLMAELAELGW----GGDDSXXXXXXXXATVARPPAGHRPRPDAAPGGDGGLGPSAAPQREASGNDLLRSLGLSLNSLGDQELTEDDLQDPDLLGELGEVSGGADFDVAAPTNTTEGETGGEYADDDDD----------EAVEPDRES---GSEVEEEDMLALGELEEHAVPPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSDGGGAXXXXXAATGEMARLEQELEVLRHRALELKKAGDRAGALEAMRAARSANHELAVMRTLETARKVATVRTEYVPP-----PSDEXXXXXXXXXXXXXXXXXXXXXXKPVSAELVMKQ-VKVLYQRAIELKKEGRKAEAMACLKRAKSLEADLRREAQGKGLVGSLEEEETGEGGCEGKRPSFVRQASARSRR------------SSLAAADAPPSAARAESRSGSRSGLPPSGKAATKPKV 473 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig11012.2119.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 2
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig11012.2119.1 >prot_M-pyrifera_M_contig11012.2119.1 ID=prot_M-pyrifera_M_contig11012.2119.1|Name=mRNA_M-pyrifera_M_contig11012.2119.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=425bp MGGVDTIAFDENDPSLMAELAELGWDDSGSGGAGGGGSGSRTAKVAKLPAback to top mRNA from alignment at M-pyrifera_M_contig11012:3460..9996- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig11012.2119.1 ID=mRNA_M-pyrifera_M_contig11012.2119.1|Name=mRNA_M-pyrifera_M_contig11012.2119.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=6537bp|location=Sequence derived from alignment at M-pyrifera_M_contig11012:3460..9996- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig11012:3460..9996- >mRNA_M-pyrifera_M_contig11012.2119.1 ID=mRNA_M-pyrifera_M_contig11012.2119.1|Name=mRNA_M-pyrifera_M_contig11012.2119.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=2550bp|location=Sequence derived from alignment at M-pyrifera_M_contig11012:3460..9996- (Macrocystis pyrifera P11B4 male)back to top |