mRNA_M-pyrifera_M_contig110119.2118.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: A0A3C1VC65_9BACT (Cellulase domain-containing protein (Fragment) n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A3C1VC65_9BACT) HSP 1 Score: 166 bits (419), Expect = 3.100e-46 Identity = 84/196 (42.86%), Postives = 118/196 (60.20%), Query Frame = 1
Query: 1 EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLP-FLPKPEYIAAKTFHNTL 585
EPN FWKP N +Y LALA K++++AAP +GP T+G+DL+F+E+ FK G L+++DAV+ HPYR S PE+ + DY LR LIA Y P + +PI+S EWGY++ + Q R++ ++ HIP+SI YDWHDD N E +FG+V N+Y P + PKP Y+AAK + L
Sbjct: 186 EPNGTFWKPKSNVDDYAALALAAAKAIQAAAPGEAVIGPATSGVDLQFIESCFKAGLLDWWDAVSVHPYRQSAPESAEADYQKLRELIARYAPKGKS-IPILSGEWGYSSAWQ-------NFDDDAQGQMLARQWLVNLANHIPLSIWYDWHDDGTNPLEPEHHFGTVANEYHAGGSPVYKPKPAYLAAKALTSVL 373
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: A0A522SEK1_9BACT (Beta-1,4-xylanase n=1 Tax=Chitinophagaceae bacterium TaxID=1869212 RepID=A0A522SEK1_9BACT) HSP 1 Score: 164 bits (416), Expect = 1.200e-45 Identity = 87/196 (44.39%), Postives = 116/196 (59.18%), Query Frame = 1
Query: 1 EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLPFLP-KPEYIAAKTFHNTL 585
EPN+GFWKP P+ EY LALA GK+++ A PD F+GP T+GI L+F+++ F+ G L+Y+DAV+ HPYR NPET DY ++R LI Y PP + +P+IS EWGY+ G + Q R + + IP+SI YDWH+D DN E NFG+V Y P KP Y+AAKT + L
Sbjct: 150 EPNIGFWKPKPDVNEYIHLALATGKAIKKATPDEAFIGPATSGIALDFLKSCFQAGLLQYWDAVSLHPYRQLNPETAVKDYQAVRRLIGKYAPPGKS-IPVISGEWGYSAAWK-----GFDAEK--QGSMLAREFLTNLSAGIPLSIWYDWHNDGDNTKDAEDNFGTVNYVYHPTGNPVYDIKPAYLAAKTLMHAL 337
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: A0A847YDN6_9BACT (Cellulase family glycosylhydrolase n=1 Tax=Thermogutta sp. TaxID=1962930 RepID=A0A847YDN6_9BACT) HSP 1 Score: 164 bits (414), Expect = 4.820e-45 Identity = 86/196 (43.88%), Postives = 117/196 (59.69%), Query Frame = 1
Query: 1 EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLP-FLPKPEYIAAKTFHNTL 585
EPN+GFWKP PN +Y LA+ VGK++R AP +++GP T+ ID++F+E FK G LEY+DAV+ HPYR + PETV +Y +LR LIA Y P + +PIIS EWGY+ E Q Y R++ + + IP+SI YDWHDD + E +FG Y P + PKP Y+AA+T + L
Sbjct: 178 EPNIGFWKPKPNVKDYTALAVEVGKAIRREAPGEIYIGPATSQIDMKFLEDCFKAGLLEYWDAVSVHPYRQTAPETVIPEYQNLRELIAKYAPAGKT-IPIISGEWGYSAAWK-------NYDEQRQGKYLPRQWLTNLAEGIPVSIWYDWHDDGPDPKEPEHHFGMTAFPYHEGRNPVYDPKPAYVAAQTLNRVL 365
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: A0A7V2XSH9_9BACT (Cellulase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V2XSH9_9BACT) HSP 1 Score: 166 bits (421), Expect = 2.440e-44 Identity = 87/196 (44.39%), Postives = 119/196 (60.71%), Query Frame = 1
Query: 1 EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLP-FLPKPEYIAAKTFHNTL 585
EPN+GFWKP PN +Y +LA AVG+++R AAP ++GP T+GIDL+F+ET FK G LE +DAV+ HPYR + PE+ +Y LR LIA Y P + +PI+S EWGY+ E +Q Y R++ + IP+SI YDWHDD + E +FG+VR Y P + PKP Y+AA+ + L
Sbjct: 182 EPNIGFWKPKPNPDDYVQLARAVGRAIREAAPGETYIGPATSGIDLDFLETCFKAGLLESWDAVSVHPYRQNGPESAAPEYRRLRRLIARYAPRGK-HVPILSGEWGYSAAWR-------NYNEEIQGRYLPRQWLTNIANEIPLSIWYDWHDDGQDAKDPEHHFGTVRFPYVKGRDPVYDPKPAYLAARALTSQL 369
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: A0A3A0D4F3_9BACT (Beta-1,4-xylanase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3A0D4F3_9BACT) HSP 1 Score: 161 bits (407), Expect = 2.780e-44 Identity = 84/197 (42.64%), Postives = 120/197 (60.91%), Query Frame = 1
Query: 1 EPNV-GFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLP-FLPKPEYIAAKTFHNTL 585
EPN+ FWKP P+ +Y LALA +++R AAP +GP T+G+DL+F+E F+ G L+Y+DAV+ HPYR + PET DYD+LR LI Y P + +PI+S EWGY++ G + Q R++ ++ IP+SI YDWHDD + E +FG+V ++Y+ P + PKP Y+AAKT TL
Sbjct: 144 EPNIPNFWKPQPDVDKYTALALATSRAIRDAAPGEAIIGPATSGVDLKFLEGCFRAGLLDYWDAVSVHPYRQTPPETALADYDNLRRLITQYAPEDK-HIPILSGEWGYSS-------GWENFDDARQGRLLPRQWLVNFSAGIPLSIWYDWHDDGPDPHEPEHHFGTVAHEYREGQSPVYEPKPAYLAAKTLTATL 332
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: A0A7X9D7R4_9BACT (Cellulase family glycosylhydrolase n=1 Tax=Bacteroidales bacterium TaxID=2030927 RepID=A0A7X9D7R4_9BACT) HSP 1 Score: 159 bits (403), Expect = 1.310e-43 Identity = 84/196 (42.86%), Postives = 115/196 (58.67%), Query Frame = 1
Query: 1 EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLP-FLPKPEYIAAKTFHNTL 585
EPN+GFWKP PN +Y +LA+ VGK++R +P +++GP T+ ID+ F+E F+ G LEY+DAV+ HPYR + PETV +Y+ L LIA Y P + +PIIS EWGY+ E Q Y R++ + +P+SI YDWHDD + E +FG V Y P + PKP Y+AAKT L
Sbjct: 158 EPNIGFWKPNPNVEDYIKLAIEVGKAIRKESPGEIYIGPATSQIDMRFLEACFQGGLLEYWDAVSVHPYRQTPPETVLPEYEKLAELIAKYAPKGKQ-IPIISGEWGYSAAWQ-------NYDEERQGKYLPRQWLTNIAAGVPLSIWYDWHDDGPDPKEPEHHFGMVTYPYHKDRNPVYDPKPAYVAAKTLCQVL 345
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: A0A286REU7_9BACT (Glutamate synthase [NADPH] large chain n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A286REU7_9BACT) HSP 1 Score: 159 bits (401), Expect = 2.440e-43 Identity = 86/196 (43.88%), Postives = 117/196 (59.69%), Query Frame = 1
Query: 1 EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLP-FLPKPEYIAAKTFHNTL 585
EPN+GFWKP PN +Y +LA+ VGK++R AP+ +++GP T+ IDL+F+E F+ G LEY+DAV+ HPYR + PETV +Y+ LR LI Y P + +PIIS EWGY+ E Q Y R++ I+ +P+SI YDWHDD + E +FG V Y P + PKP Y AA+T L
Sbjct: 155 EPNIGFWKPKPNVQDYVKLAVEVGKTLRREAPEELYIGPATSQIDLKFLEACFQGGLLEYWDAVSVHPYRQTPPETVLPEYEKLRQLIDKYAPAGKK-IPIISGEWGYSAVWK-------NYDETRQGKYLPRQWLINISAGVPVSIWYDWHDDGPDPKEPEHHFGMVAYPYHAGRDPVYDPKPAYRAAQTLCRVL 342
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: A0A7V4HQ05_9BACT (Cellulase domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7V4HQ05_9BACT) HSP 1 Score: 162 bits (409), Expect = 1.030e-42 Identity = 85/196 (43.37%), Postives = 121/196 (61.73%), Query Frame = 1
Query: 1 EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLP-FLPKPEYIAAKTFHNTL 585
EPN+GFWKP P+ +Y +LAL VGK++R AAP+ +++GP T+ IDL F+E FK G LEY+ AV+ HPYR + PET +Y +LR LIA Y P + +PI+S EWGY++ E Q + R++ ++ +P+SI YDWHDD + E +FG+V ++Y+ P + PKP Y AAKT L
Sbjct: 145 EPNIGFWKPQPDVKQYIQLALEVGKALREAAPEEMYIGPATSQIDLPFLEECFKAGLLEYWSAVSVHPYRQTPPETAAAEYAALRQLIAKYAPKGKS-IPILSGEWGYSSVWK-------NFDEAKQGKFLPRQWLMNLANDVPLSIWYDWHDDGPDPKEPEHHFGAVFHEYRAGRDPVYDPKPAYRAAKTLTTVL 332
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: A0A847GZ17_9BACT (Cellulase family glycosylhydrolase n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GZ17_9BACT) HSP 1 Score: 160 bits (404), Expect = 4.720e-42 Identity = 85/196 (43.37%), Postives = 118/196 (60.20%), Query Frame = 1
Query: 1 EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLP-FLPKPEYIAAKTFHNTL 585
EPN+GFWKP P+A +Y +LALAVG+++R A D ++VGP T+ +DL+F+E F+ G LEY+ AV+ HPYR PET DY LR LIA Y PP + +PI+S EWGY+ ++ Q R++ + +P+SI YDWHDD + E +FG+V Y+ P + PKP Y AA+T TL
Sbjct: 152 EPNIGFWKPKPDAEQYVKLALAVGQAIRRVAADELYVGPATSQVDLKFLEKCFQAGLLEYWSAVSVHPYRQQPPETAAEDYARLRRLIARYAPPGKR-IPILSGEWGYSAAWQ-------RMDAEKQGQMLPRQWLTNLANDVPVSIWYDWHDDGPDPKEPEHHFGTVLFPYRQGQRPVYEPKPAYRAAQTLTKTL 339
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Match: S0EUH4_CHTCT (Cellulase (Glycosyl hydrolase family 5) n=3 Tax=Chthonomonas TaxID=1077265 RepID=S0EUH4_CHTCT) HSP 1 Score: 155 bits (391), Expect = 6.160e-42 Identity = 84/195 (43.08%), Postives = 119/195 (61.03%), Query Frame = 1
Query: 1 EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMETVFKMGALEYFDAVTCHPYRTSNPETVQYDYDSLRALIATYTPPSRPFLPIISSEWGYTTCESPCQPGGPQVTELVQALYAVRRYGIDDLKHIPISITYDWHDDFDNKTAREANFGSVRNQYQNASLPFLPKPEYIAAKTFHNTL 585
EPN+GFW+P P+ +Y +LALAVG+++R APD ++GP +G+D F+E FK G L+Y+DAV+ HPYR S PET D++ +R LI Y PP + +PI++SEWGY S PG + Q+ Y VR + + + ++I YDWHDD + E +FG+V N YQ PK Y+AA+T TL
Sbjct: 150 EPNIGFWQPHPDVNQYADLALAVGQTIRRVAPDEWYIGPGMSGMDFGFLEGCFKRGLLQYWDAVSFHPYRDSAPETAAPDFEHVRQLIQQYAPPGKS-VPILASEWGY----SELYPG---LDLEKQSRYIVREFLSNIANGLLLTIWYDWHDDGLDPHNAEHHFGTVFNNYQ-------PKSTYLAAQTLARTL 329 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110119.2118.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig110119.2118.1 >prot_M-pyrifera_M_contig110119.2118.1 ID=prot_M-pyrifera_M_contig110119.2118.1|Name=mRNA_M-pyrifera_M_contig110119.2118.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp EPNVGFWKPTPNATEYGELALAVGKSVRSAAPDAVFVGPTTAGIDLEFMEback to top mRNA from alignment at M-pyrifera_M_contig110119:2..586+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig110119.2118.1 ID=mRNA_M-pyrifera_M_contig110119.2118.1|Name=mRNA_M-pyrifera_M_contig110119.2118.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=585bp|location=Sequence derived from alignment at M-pyrifera_M_contig110119:2..586+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig110119:2..586+ >mRNA_M-pyrifera_M_contig110119.2118.1 ID=mRNA_M-pyrifera_M_contig110119.2118.1|Name=mRNA_M-pyrifera_M_contig110119.2118.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig110119:2..586+ (Macrocystis pyrifera P11B4 male)back to top |