prot_M-pyrifera_M_contig110092.2111.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110092.2111.1
Unique Nameprot_M-pyrifera_M_contig110092.2111.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length146
Homology
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BLAST of mRNA_M-pyrifera_M_contig110092.2111.1 vs. uniprot
Match: UPI001E4957AB (hypothetical protein n=1 Tax=unclassified Blastopirellula TaxID=2647022 RepID=UPI001E4957AB)

HSP 1 Score: 93.2 bits (230), Expect = 1.900e-21
Identity = 51/119 (42.86%), Postives = 71/119 (59.66%), Query Frame = 0 
Query:   21 QDNGVEPLV---SGYELMEILYEPYMDQLKEAVATEPEKRRGWQAIYKSSLALGELAALNLTRNDEDYMATPEWKEMTLASRTLNVDIAEAAKGKDFAGVTAKYQALVESCNACHTKFA 136
            Q N  EP       +E ME +Y+P   +LK A+A EP++   W+ I  +SL L E   L L+R  E+  A  EW E ++A+R L  D+  AAK KD+A  T  Y+A+++ CNACHTKFA
Sbjct:   21 QANAAEPKPVESDMHEFMEYVYQPTYKRLKPAMAAEPKENAVWKEIKSTSLILAESGNLLLSRAPEEGAA--EWNEYSIATRELGGDLYRAAKKKDYAAATTAYKAMLQKCNACHTKFA 137
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110092.2111.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
UPI001E4957AB1.900e-2142.86hypothetical protein n=1 Tax=unclassified Blastopi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002321Cytochrome c, class IIPFAMPF01322Cytochrom_C_2coord: 103..135
e-value: 2.3E-4
score: 22.0
IPR002321Cytochrome c, class IIPROSITEPS51009CYTCIIcoord: 103..137
score: 8.852
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..145
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..20
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.735
IPR010980Cytochrome c/b562SUPERFAMILY47175Cytochromescoord: 38..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110092contigM-pyrifera_M_contig110092:83..520 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110092.2111.1mRNA_M-pyrifera_M_contig110092.2111.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110092 83..520 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110092.2111.1 ID=prot_M-pyrifera_M_contig110092.2111.1|Name=mRNA_M-pyrifera_M_contig110092.2111.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
LVFFVLAGVVIAAYSADVRAQDNGVEPLVSGYELMEILYEPYMDQLKEAV
ATEPEKRRGWQAIYKSSLALGELAALNLTRNDEDYMATPEWKEMTLASRT
LNVDIAEAAKGKDFAGVTAKYQALVESCNACHTKFAAEDAPTIEP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002321Cyt_c_II
IPR010980Cyt_c/b562