mRNA_M-pyrifera_M_contig90904.21074.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90904.21074.1
Unique NamemRNA_M-pyrifera_M_contig90904.21074.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A2D9C7Y9_9BACT (Non-specific serine/threonine protein kinase n=3 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9C7Y9_9BACT)

HSP 1 Score: 329 bits (843), Expect = 4.960e-104
Identity = 165/263 (62.74%), Postives = 205/263 (77.95%), Query Frame = 1
Query:    4 RAHLDSCEQCRKTLDELNKLDALADRVRSASASTTVIPN---HIAGYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYLRAKHASIDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDETDPELRTVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPHDVSGPIDSAIR 783
            RAH++SC  C+  L+EL++LDA A++VR  ++      +    I GYEL  EIHRGGQGIVFAATQ ST ++VA+K+LLHG+L++Q+QR+RFEREVD AARI HPNVV IIDRG T+D  G+F ME +DG TLD YL     +++ RL +FT+IC GV+AAHQR VLHRDLKPGNILID     +VLDFGLAK +L ++    RTVAGEF+GTLAYA+PEQLR NPD +D RADVYALGVILYEM+T  LPHD++GPID+ IR
Sbjct:   32 RAHMESCATCKGRLNELDQLDAFAEQVRELASPEQPAQDGALQIPGYELSHEIHRGGQGIVFAATQVSTGRQVAVKVLLHGVLASQKQRMRFEREVDYAARINHPNVVAIIDRGTTRDDRGFFVMELIDGPTLDGYLETHRPTLEQRLRLFTEICDGVQAAHQRGVLHRDLKPGNILIDQSGRAKVLDFGLAKDDLADSVTIARTVAGEFMGTLAYASPEQLRANPDAIDSRADVYALGVILYEMVTGVLPHDMTGPIDTVIR 294          
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A812XWH7_9DINO (PrkC protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XWH7_9DINO)

HSP 1 Score: 300 bits (769), Expect = 5.060e-92
Identity = 154/263 (58.56%), Postives = 191/263 (72.62%), Query Frame = 1
Query:    4 RAHLDSCEQCRKTLDELNKLDALADRVRSASASTTVIPN---HIAGYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYLRAKHASIDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDETDPELRTVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPHDVSGPIDSAIR 783
            R HLDSC  C+ T  EL  LDAL  RVR  S +  V       I GY +  EIHRGGQGIV+ ATQ ST ++VAIK+LL G L+++ QR RFERE+DLA+RI HPNVV IIDRG T DG G+ AME ++G TLD YL  +  S++DRL +F Q+C GV AAHQR VLHRDLKP NILID     R+LDFGLAK  L+E+   +RT+ GEF+GTLAYA+PEQLRG+P  +D R D+Y LGV+LYEML  +LPH++SG I++ I+
Sbjct:  183 RTHLDSCVACQGTHAELGSLDALVSRVREVSGTEDVQAAGTLSIEGYTISHEIHRGGQGIVYHATQNSTGRKVAIKVLLKGALASEGQRRRFEREIDLASRINHPNVVSIIDRGETADGRGFLAMELIEGPTLDGYLAERELSVEDRLRLFVQVCDGVVAAHQRGVLHRDLKPANILIDQAGRPRLLDFGLAKDHLNESATMVRTMEGEFMGTLAYASPEQLRGDPSLIDARTDIYTLGVLLYEMLCGKLPHEMSGSIEAVIQ 445          
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A2D7NHP7_9PLAN (Non-specific serine/threonine protein kinase n=2 Tax=Planctomycetes TaxID=203682 RepID=A0A2D7NHP7_9PLAN)

HSP 1 Score: 239 bits (610), Expect = 4.080e-70
Identity = 120/263 (45.63%), Postives = 169/263 (64.26%), Query Frame = 1
Query:   10 HLDSCEQCRKTLDELNKLDALADRVRSASASTT----VIPNHIAGYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYLRAKHASIDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDETDPE--LRTVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPHDVSGPIDSAI 780
            H+  C +CR  L E+   + L +    A + +          + GYE+  EIHRGGQG+V+ A Q +T + VAIK++L G L+T RQR RF REV+L A ++HP +V + + G T DG  YFAME+VDG TLD++      SI++R+  F ++C  +R AH R V+HRDLKPGNIL+D   +  VLDFG+A+   D T P+  + T+AGEF+GT AYA+PEQL G+ D +D+R DV+ALGV+LYE+LT   P +    +   I
Sbjct:   56 HVADCSRCRTLLQEIRSENDLLNSALFAESRSNGPRDSSTQSVEGYEVLSEIHRGGQGVVYKARQVATNRTVAIKMMLQGRLATSRQRHRFTREVELVAGLRHPGIVTLYESGSTSDGNDYFAMEYVDGSTLDQWAELSTPSIENRVTFFAEVCSAIRYAHGRGVIHRDLKPGNILVDEQGLPHVLDFGIARMTPDRTSPDETMATLAGEFLGTFAYASPEQLEGDSDRIDIRTDVFALGVLLYELLTGCRPFETGNSLAELI 318          
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A3M1QG63_9BACT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1QG63_9BACT)

HSP 1 Score: 226 bits (577), Expect = 4.560e-70
Identity = 118/226 (52.21%), Postives = 156/226 (69.03%), Query Frame = 1
Query:  121 HIAGYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYLRAKHASIDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDETDPELRTV-----AGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPHDVSGPIDSAIR 783
            HI GYE+ EE+HRGGQG+V+ ATQ + ++ VA+K+LL G  + +  R+RFERE++LAA +QHPN+V I+D G T DG  YFAME+VDG+ LD YLR +   +   LA+  QI   V  AHQR V+HRDLKP NILID+    R+LDFGLAK+  D  DP+  TV      G+ +GTLAY +PEQ  G+ D VD+R+DVY+LGVI YE L    P+ V GP+   ++
Sbjct:   44 HIDGYEIHEELHRGGQGVVYRATQLAFKREVALKVLLEGPFAGETSRVRFEREIELAASLQHPNIVTILDSGTT-DGRCYFAMEYVDGQRLDAYLRDRQPDLAQTLALLRQIAETVHFAHQRGVIHRDLKPSNILIDSAGQPRILDFGLAKATAD-ADPQKTTVRMVSTTGQVIGTLAYMSPEQAAGSAD-VDIRSDVYSLGVIAYEALLQATPYPVDGPLGEVLQ 266          
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A3A4QFZ8_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3A4QFZ8_9BACT)

HSP 1 Score: 240 bits (612), Expect = 1.260e-69
Identity = 131/271 (48.34%), Postives = 173/271 (63.84%), Query Frame = 1
Query:   10 HLDSCEQCRKTLDELNKLDALADRVRSASASTTVIP-------NHIAGYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYLRAKH------ASIDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDETDPELRTVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPHDVSGPIDSAIR 783
            HL+SC  C+  L+ + + +A      +   ST VIP         + G+++  EIHRGGQGIV+ A Q+ T + VA+K+L  G  ++ RQR RFERE++L A +QHPN+V + + G T DG  YFAME+V G  LD +L  K       A ++DRL +F +IC GV  AHQR V HRDLKPGN+LIDA     V+DFGLAK+     +  + T+ GEF+GTLAYAAPEQLRG+P  +D R DVYALGVILYEMLT   PH   G +   ++
Sbjct:   26 HLESCPTCQAGLERVRRNNAFI----AEFGSTAVIPVTQAPPRETVEGFDILGEIHRGGQGIVYKAIQRKTHRTVALKVLAEGAFASPRQRRRFEREIELVAHLQHPNIVTLYESGETPDGRQYFAMEYVHGVPLDRHLAGKGGGKAVGAHLNDRLTLFRKICAGVSHAHQRGVTHRDLKPGNVLIDAEGEPHVVDFGLAKTPGGGGEAPM-TMTGEFMGTLAYAAPEQLRGDPALIDTRTDVYALGVILYEMLTGARPHPSEGSMMEVLK 291          
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A7Y5RYQ9_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7Y5RYQ9_9BACT)

HSP 1 Score: 239 bits (610), Expect = 8.990e-69
Identity = 133/284 (46.83%), Postives = 178/284 (62.68%), Query Frame = 1
Query:    4 RAHLDSCEQCRKTLDELNKLDALADRVRS-----------ASASTTVIPNHIA------GYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYL-RAKHAS-----IDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDE--TDPELRTVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPHDVSGPIDSAI 780
            R H+D C +CR+    + +  AL D VR+           A+A+    P          GYE+  E+HRGGQG+V+ A  K+T + VA+K+LL G  +T RQR RFERE++LAA ++HP++V I D G T DG  YFAME ++G  LD +L R +H       ++ RL +F ++C  V  AHQR V+HRDLKP NIL+DA     VLDFGLAK+  D   T     T AGEF+GT AYAAPEQL G+P+ +D R DVYALGV+LY++LT+ LP  VSG +  A+
Sbjct:   25 RRHVDDCPRCRERARHIRENAALLDDVRAVGAASLTDCLDAAAAPGATPRRAVADAAPDGYEILHELHRGGQGVVYLARHKATHRTVALKMLLQGAFATSRQRRRFEREIELAAALRHPHIVTIFDSGTTPDGRHYFAMEFIEGPPLDRFLARRRHGVAAGDLLESRLRLFLKLCDAVNHAHQRGVIHRDLKPANILVDAAGEPHVLDFGLAKALGDGALTASADVTRAGEFMGTFAYAAPEQLAGDPNQIDTRTDVYALGVLLYQILTDALPFRVSGSLSEAL 308          
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A2E3RSI2_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2E3RSI2_9BACT)

HSP 1 Score: 236 bits (602), Expect = 9.770e-69
Identity = 128/268 (47.76%), Postives = 170/268 (63.43%), Query Frame = 1
Query:    7 AHLDSCEQCRKTLDELNK--------LDALADRVRSASASTTVIPNHIAGYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYLRAKHASIDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDETDPELR--TVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPHDVSGPIDSAI 780
            AH+  CEQC   +D +          L A +DR+ +   +   IP    GYE+ +E+HRGGQG+VF   Q ST++ VA+K+LL G  +T +QRLRFEREV++ A ++HPN+V + + GLT DG  YFAME VDG+  D++L     +    L + + I   V  AHQR V+HRD+KP N+L+D      VLDFGLA++ LDE   + +  T AGEF+GT AYAAPEQL G PDD+DVR DVYALG++LYEMLT   P    G I   I
Sbjct:   30 AHVQQCEQCGAAVDSIRSDNDLIQEFLGANSDRLSATRNNQEQIP----GYEVGDELHRGGQGVVFKGLQVSTRRTVALKMLLQGRFATSKQRLRFEREVEVVASLRHPNIVTLYESGLTTDGQVYFAMEFVDGQPADDFLEDSSWNSRQILGLVSTIARAVSYAHQRGVIHRDIKPANVLVDDEGQPHVLDFGLARN-LDEPLHQEKGATAAGEFLGTFAYAAPEQLSGKPDDIDVRTDVYALGIMLYEMLTGLRPFPGGGSISEII 292          
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A518LPH9_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Phycisphaerae bacterium RAS2 TaxID=2528035 RepID=A0A518LPH9_9BACT)

HSP 1 Score: 236 bits (601), Expect = 1.810e-67
Identity = 131/271 (48.34%), Postives = 176/271 (64.94%), Query Frame = 1
Query:   10 HLDSCEQCRKTLDELNKLDALADRVRSASAS---------TTVIP-NHIAGYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYLRAKH--ASIDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDET-DPELRTVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPHDVSGPIDSAIR 783
            H+++C +CR  + E    + L  R     A+         ++V P + I GY L  E+HRGGQGIV+ A QKST++RVA+K+L  G LST +QR RFERE++L A ++HP++V + + G T DG  YFAME + G+ L+E  + +   ASI   LA+F QIC  V+ AHQR ++HRDLKP NIL+D      +LDFG+AK+  D+  +  L T AGEF+GT AYAAPEQ+ G  D +D R DVYALGV+LYE LT  LP DV  P+  AIR
Sbjct:   34 HVETCRRCRDCVSEFRANNQLIARFARPGANDSPPATTIWSSVEPADLILGYTLGPELHRGGQGIVYEAVQKSTKRRVALKMLRPGALSTDKQRRRFEREIELVAGMRHPHIVTVYESGDTADGRRYFAMELIRGQPLNEAWQRRQDPASIRRLLALFIQICDAVQYAHQRGIIHRDLKPANILVDETGAPHILDFGVAKALGDDLHEGLLATRAGEFMGTFAYAAPEQVEGRIDQIDTRTDVYALGVLLYEALTGALPSDVDRPLSDAIR 304          
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A7V4UC46_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7V4UC46_9BACT)

HSP 1 Score: 235 bits (600), Expect = 2.430e-67
Identity = 126/272 (46.32%), Postives = 178/272 (65.44%), Query Frame = 1
Query:   10 HLDSCEQCRKT----------LDELNKLDALADRVRSASASTTVIPNHIAGYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYL---RAKHASIDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDETDP--ELRTVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPHDVSGPIDSAI 780
            H+++C +CR            L  L + +  A+   SA+A  T  P  +AGY++  E+HRGGQG+V+ A Q++T++ VAIK+LL G  +T RQR RFERE+++ AR++HPN+V I + G + DG  Y+ ME+VDG+ LD YL   RA  A + DRL +F +IC  V  AHQ  ++HRDLKP NILIDA     VLDFGLAK+  +E DP     T  G+F+GT +YAAPEQLRG    +D R DVYA+GV+L+E +T + P+ V+G + + +
Sbjct:   26 HIETCPRCRVRARRVRENQVMLARLGRGNVRAEPGGSAAAMLTKSPG-LAGYDVQGELHRGGQGVVYRAFQRATKRTVAIKVLLRGAFATSRQRHRFEREIEIVARLRHPNIVSIFESGESPDGSHYYVMEYVDGQPLDAYLERVRAAGAPLGDRLRLFCKICDAVSYAHQCGIIHRDLKPANILIDAAGEPHVLDFGLAKAVGEELDPLSANMTRTGDFLGTFSYAAPEQLRGASGLIDTRTDVYAIGVMLFEAVTGQFPYSVAGSLSAIL 296          
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Match: A0A7C2PTM9_9BACT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A7C2PTM9_9BACT)

HSP 1 Score: 217 bits (553), Expect = 1.400e-66
Identity = 110/231 (47.62%), Postives = 155/231 (67.10%), Query Frame = 1
Query:   43 LDELNKLDALADRVRSASASTTVIPNHIAGYELDEEIHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARIQHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYLRAKHASIDDRLAIFTQICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDETDPELRTVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLT 735
            L+   +LD   D    A+ +  V   HI GY++  E+ RGGQG VF A Q ST+++VA+K+LL G  ++   R RFEREVDLA  ++H N++ I+D G+T D   Y+ M++V GK L  ++R     +D+ L +F ++C  V+ AHQR V+HRDLKP NIL+DA    R+LDFGLAK +L  ++  L +++   +GTL Y +PEQ RGNPD++D R DVYALGVILYE+LT
Sbjct:   62 LNVREQLDREGDAPTGAAPAAGV---HIEGYQIVRELGRGGQGAVFQAIQLSTKRKVALKVLLEGAYASPATRRRFEREVDLAVSLKHANIIAILDSGVTDDSRPYYVMDYVRGKPLHHHVRDHRLPLDEMLRLFRKVCEAVQYAHQRGVIHRDLKPSNILVDAQGEPRILDFGLAK-QLAASEAALLSISQNIMGTLPYMSPEQTRGNPDEIDTRTDVYALGVILYELLT 288          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90904.21074.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D9C7Y9_9BACT4.960e-10462.74Non-specific serine/threonine protein kinase n=3 T... [more]
A0A812XWH7_9DINO5.060e-9258.56PrkC protein n=1 Tax=Symbiodinium sp. CCMP2592 Tax... [more]
A0A2D7NHP7_9PLAN4.080e-7045.63Non-specific serine/threonine protein kinase n=2 T... [more]
A0A3M1QG63_9BACT4.560e-7052.21Non-specific serine/threonine protein kinase (Frag... [more]
A0A3A4QFZ8_9BACT1.260e-6948.34Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7Y5RYQ9_9BACT8.990e-6946.83Non-specific serine/threonine protein kinase n=1 T... [more]
A0A2E3RSI2_9BACT9.770e-6947.76Non-specific serine/threonine protein kinase n=1 T... [more]
A0A518LPH9_9BACT1.810e-6748.34Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7V4UC46_9BACT2.430e-6746.32Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7C2PTM9_9BACT1.400e-6647.62Non-specific serine/threonine protein kinase (Frag... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90904contigM-pyrifera_M_contig90904:3..785 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score184.5
Seed ortholog evalue6.3e-44
Seed eggNOG ortholog1089550.ATTH01000001_gene1831
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Protein tyrosine kinase
EggNOG OGs1FJI6@1100069,4NPN9@976,COG0515@1,COG0515@2
COG Functional cat.KLT
Best tax levelBacteroidetes Order II. Incertae sedis
Best eggNOG OGNA|NA|NA
Exons1
Model size783
Cds size783
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816821.397963-CDS-M-pyrifera_M_contig90904:2..7851622816821.397963-CDS-M-pyrifera_M_contig90904:2..785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90904 3..785 +
1692278198.3033173-CDS-M-pyrifera_M_contig90904:2..7851692278198.3033173-CDS-M-pyrifera_M_contig90904:2..785Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90904 3..785 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90904.21074.1prot_M-pyrifera_M_contig90904.21074.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90904 3..785 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90904.21074.1

>prot_M-pyrifera_M_contig90904.21074.1 ID=prot_M-pyrifera_M_contig90904.21074.1|Name=mRNA_M-pyrifera_M_contig90904.21074.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=261bp
TRAHLDSCEQCRKTLDELNKLDALADRVRSASASTTVIPNHIAGYELDEE
IHRGGQGIVFAATQKSTQQRVAIKILLHGLLSTQRQRLRFEREVDLAARI
QHPNVVRIIDRGLTQDGYGYFAMEHVDGKTLDEYLRAKHASIDDRLAIFT
QICHGVRAAHQRAVLHRDLKPGNILIDAHNVVRVLDFGLAKSELDETDPE
LRTVAGEFVGTLAYAAPEQLRGNPDDVDVRADVYALGVILYEMLTNELPH
DVSGPIDSAIR
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mRNA from alignment at M-pyrifera_M_contig90904:3..785+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90904.21074.1 ID=mRNA_M-pyrifera_M_contig90904.21074.1|Name=mRNA_M-pyrifera_M_contig90904.21074.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=783bp|location=Sequence derived from alignment at M-pyrifera_M_contig90904:3..785+ (Macrocystis pyrifera P11B4 male)
ACACGCGCCCATCTCGATTCATGCGAGCAGTGCAGAAAGACGCTCGACGA ACTCAACAAGCTCGATGCACTCGCAGATCGTGTTCGCAGCGCGAGCGCTT CAACAACAGTGATCCCCAATCACATCGCAGGCTACGAACTCGATGAAGAA ATCCATCGGGGGGGACAGGGCATCGTCTTCGCAGCGACACAGAAGTCGAC ACAGCAGCGTGTCGCGATCAAGATTCTCCTGCACGGCTTGCTCTCGACAC AGCGTCAACGCTTGCGCTTTGAACGCGAAGTCGATCTCGCAGCTCGGATC CAGCATCCAAATGTCGTCCGCATCATCGATCGGGGACTCACACAAGACGG TTACGGCTATTTTGCAATGGAACATGTCGATGGGAAGACGCTCGACGAGT ATCTCAGAGCGAAGCATGCTTCCATCGATGATCGGCTCGCGATCTTCACG CAGATCTGTCACGGTGTGCGTGCCGCTCATCAGCGTGCTGTGCTGCATCG TGATCTCAAGCCGGGGAATATCCTGATCGATGCGCACAATGTTGTCAGAG TCTTGGACTTTGGACTCGCGAAGTCTGAACTCGACGAAACGGATCCTGAA CTCCGAACAGTTGCAGGGGAGTTCGTCGGCACGCTCGCGTACGCTGCTCC CGAGCAACTTCGTGGGAATCCGGACGATGTCGATGTTCGCGCTGATGTCT ACGCGCTCGGCGTGATCCTCTACGAGATGCTGACAAACGAACTGCCGCAC GATGTCAGCGGTCCCATCGATTCTGCGATCCGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90904:3..785+

>mRNA_M-pyrifera_M_contig90904.21074.1 ID=mRNA_M-pyrifera_M_contig90904.21074.1|Name=mRNA_M-pyrifera_M_contig90904.21074.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1566bp|location=Sequence derived from alignment at M-pyrifera_M_contig90904:3..785+ (Macrocystis pyrifera P11B4 male)
ACACGCGCCCATCTCGATTCATGCGAGCAGTGCAGAAAGACGCTCGACGA
ACTCAACAAGCTCGATGCACTCGCAGATCGTGTTCGCAGCGCGAGCGCTT
CAACAACAGTGATCCCCAATCACATCGCAGGCTACGAACTCGATGAAGAA
ATCCATCGGGGGGGACAGGGCATCGTCTTCGCAGCGACACAGAAGTCGAC
ACAGCAGCGTGTCGCGATCAAGATTCTCCTGCACGGCTTGCTCTCGACAC
AGCGTCAACGCTTGCGCTTTGAACGCGAAGTCGATCTCGCAGCTCGGATC
CAGCATCCAAATGTCGTCCGCATCATCGATCGGGGACTCACACAAGACGG
TTACGGCTATTTTGCAATGGAACATGTCGATGGGAAGACGCTCGACGAGT
ATCTCAGAGCGAAGCATGCTTCCATCGATGATCGGCTCGCGATCTTCACG
CAGATCTGTCACGGTGTGCGTGCCGCTCATCAGCGTGCTGTGCTGCATCG
TGATCTCAAGCCGGGGAATATCCTGATCGATGCGCACAATGTTGTCAGAG
TCTTGGACTTTGGACTCGCGAAGTCTGAACTCGACGAAACGGATCCTGAA
CTCCGAACAGTTGCAGGGGAGTTCGTCGGCACGCTCGCGTACGCTGCTCC
CGAGCAACTTCGTGGGAATCCGGACGATGTCGATGTTCGCGCTGATGTCT
ACGCGCTCGGCGTGATCCTCTACGAGATGCTGACAAACGAACTGCCGCAC
GATGTCAGCGGTCCCATCGATTCTGCGATCCGTACACGCGCCCATCTCGA
TTCATGCGAGCAGTGCAGAAAGACGCTCGACGAACTCAACAAGCTCGATG
CACTCGCAGATCGTGTTCGCAGCGCGAGCGCTTCAACAACAGTGATCCCC
AATCACATCGCAGGCTACGAACTCGATGAAGAAATCCATCGGGGGGGACA
GGGCATCGTCTTCGCAGCGACACAGAAGTCGACACAGCAGCGTGTCGCGA
TCAAGATTCTCCTGCACGGCTTGCTCTCGACACAGCGTCAACGCTTGCGC
TTTGAACGCGAAGTCGATCTCGCAGCTCGGATCCAGCATCCAAATGTCGT
CCGCATCATCGATCGGGGACTCACACAAGACGGTTACGGCTATTTTGCAA
TGGAACATGTCGATGGGAAGACGCTCGACGAGTATCTCAGAGCGAAGCAT
GCTTCCATCGATGATCGGCTCGCGATCTTCACGCAGATCTGTCACGGTGT
GCGTGCCGCTCATCAGCGTGCTGTGCTGCATCGTGATCTCAAGCCGGGGA
ATATCCTGATCGATGCGCACAATGTTGTCAGAGTCTTGGACTTTGGACTC
GCGAAGTCTGAACTCGACGAAACGGATCCTGAACTCCGAACAGTTGCAGG
GGAGTTCGTCGGCACGCTCGCGTACGCTGCTCCCGAGCAACTTCGTGGGA
ATCCGGACGATGTCGATGTTCGCGCTGATGTCTACGCGCTCGGCGTGATC
CTCTACGAGATGCTGACAAACGAACTGCCGCACGATGTCAGCGGTCCCAT
CGATTCTGCGATCCGT
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