mRNA_M-pyrifera_M_contig90900.21072.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90900.21072.1
Unique NamemRNA_M-pyrifera_M_contig90900.21072.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: E9GBR1_DAPPU (Uncharacterized protein n=3 Tax=Daphnia TaxID=6668 RepID=E9GBR1_DAPPU)

HSP 1 Score: 153 bits (387), Expect = 9.800e-39
Identity = 100/264 (37.88%), Postives = 150/264 (56.82%), Query Frame = 1
Query:   10 GEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHITIAITFVTELETEEDALRFRLPLTHIPRF--NAGRRAVGAPLVS---QEESTFALEFTAHFSMSQPLESVTSFTHDISV--DMEDNGMHGSVSLCDAAKIDGDLDLLFSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRTEIILLVDRSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYNEKTLATATGH 780
            G V+    A T Y +AI++GH+A LV+E   D+ +  VGN+AP S   I +T+VTEL+ E   +RF LP T  PR+     + +  A L S     ES + ++F A   M+  +  + S TH I+V  D+ +   +G++   D      D DL+  ++V+  +  +P ++ EK P   + A ++S  P  +   Q+TE+I LVDRSGSM GS I  AK+ALQ+FL SLP +C  NI GFG++++ LF  S  Y+E  L  A  H
Sbjct:   78 GVVKETEQAKTDYDQAIKSGHSAFLVEEKLPDVFKAKVGNLAPGSGAKIRLTYVTELKVEGKEIRFYLPTTIAPRYIPPTDKSSTAADLASIKYSTESNYQVDFNATVQMASAITEIRSPTHKIAVTRDVVNKPQYGTLRF-DNVVTSMDRDLVVYIQVA--EPNQPRLICEKSPK-GTTALMLSLVPSFKLTEQKTELIFLVDRSGSMGGSGINQAKQALQLFLHSLPLDCYVNIAGFGSSYEELFPTSRKYDETVLNLAKQH 337          
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: A0A164ND07_9CRUS (VIT domain-containing protein n=2 Tax=Daphnia magna TaxID=35525 RepID=A0A164ND07_9CRUS)

HSP 1 Score: 150 bits (378), Expect = 1.390e-37
Identity = 97/260 (37.31%), Postives = 153/260 (58.85%), Query Frame = 1
Query:   10 GEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHITIAITFVTELETEEDALRFRLPLTHIPRF--NAGRRAVGAPLVS---QEESTFALEFTAHFSMSQPLESVTSFTHDISVDMED-NGMHGSVSLCDAAKIDGDLDLLFSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRTEIILLVDRSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYNEKTLATA 771
            G V+  + A   Y  AI++GH+A LV+E   D+ +  VGN+A  S   I++T+VTEL+ E   +RF LP T  PR+  ++ + +  A L S    E+S + ++F A   M+  ++ +   TH I+V+++    ++G+  L D      D DL+F ++V+  +  +P ++ EK P + + A ++S  P  +   Q+TE+I LVDRSGSM G  I  AK+AL++FL SLP +C  NI GFG T++ LF  S  Y+E  L TA
Sbjct:   78 GVVKETKEAREDYDEAIQSGHSAFLVEEKLPDVFKAKVGNLAAGSGAKISLTYVTELKVEGKEIRFYLPTTIAPRYVPSSDKSSTAADLASIQYTEQSNYQVDFNASVRMASAIKEIRCPTHKIAVNLDAATPLNGTFHL-DNVVTSMDRDLVFYIQVA--EPNQPRLIHEKSP-NGTTAVMLSLVPTFKLAEQKTELIFLVDRSGSMDGPGIGQAKQALKLFLHSLPLDCYVNIAGFGNTYEELFPASRKYDEVVLNTA 333          
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: A0A8J2WCT1_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WCT1_9CRUS)

HSP 1 Score: 147 bits (372), Expect = 1.250e-36
Identity = 98/261 (37.55%), Postives = 148/261 (56.70%), Query Frame = 1
Query:   10 GEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHITIAITFVTELETEEDALRFRLPLTHIPRF--NAGRRAVGAPLVS---QEESTFALEFTAHFSMSQPLESVTSFTHDISV--DMEDNGMHGSVSLCDAAKIDGDLDLLFSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRTEIILLVDRSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYNEKTLATA 771
            G V+    A T Y  AI++GH+A LV+E   D+ +  VGN+A  S   I +T+VTEL+ E   +RF LP T  PR+       +V   L       +S + ++F A   M   ++ + S TH I+V  D  +  M+G++ L D      D DL+  ++V+  +  EP ++ EK  ++ S A ++S  P  +   Q+TE+I LVDRSGSM+G+ IE A++AL++FL SLP +C  NI GFG T++ LF  S  Y+E  L  A
Sbjct:  878 GIVKETEEARTDYEHAIQSGHSAFLVEEKLPDVFKAKVGNLAAGSGAKIRLTYVTELKVEGGEIRFYLPTTIAPRYVPPTDHSSVAKDLAGINYTPDSQYKIDFNATVRMGSAIKEIRSPTHKIAVSHDAVNKPMNGALKL-DNVVTSMDRDLVVYIQVA--EPNEPRLIHEKS-SNGSSAVMLSLVPSFKLAEQKTELIFLVDRSGSMQGAGIEQARQALKLFLHSLPMDCYVNIAGFGFTYEELFPSSRKYDEVVLNNA 1134          
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: E9FQW5_DAPPU (Uncharacterized protein n=3 Tax=Daphnia TaxID=6668 RepID=E9FQW5_DAPPU)

HSP 1 Score: 147 bits (371), Expect = 1.390e-36
Identity = 98/261 (37.55%), Postives = 148/261 (56.70%), Query Frame = 1
Query:    1 RLVGEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHITIAITFVTELETEEDALRFRLPLTHIPRF--NAGRRAVGAPLVS---QEESTFALEFTAHFSMSQPLESVTSFTHDISV--DMEDNGMHGSVSLCDAAKIDGDLDLLFSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRTEIILLVDRSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYNEKTL 762
            ++ G V+    A   Y +AI++GH+A LV+E   D+ +  VGN+A  S   I +T+VTEL+ E   +RF LP T  PR+       +V   L S    +ES + ++F A   M   ++ + S TH I V  D  +  M G++ L D      D DL+  ++V+  +  +P ++ EK  ++ S A ++S  P  +   Q+TE+I LVDRSGSM GS IE AK+AL++FL SLP +C  NI GFG +++ LF  S  Y+E  L
Sbjct:   75 KIEGVVKETEEARNDYEQAIQSGHSAFLVEEKLPDVFKAKVGNLAAGSGAKIRLTYVTELKVEGGEIRFYLPTTIAPRYVPPTDHSSVAKDLASINYTQESHYRVDFNATVRMGSAIKEIRSPTHKIVVSHDSVNKPMDGTLKLDDVVT-SMDRDLVVYIKVA--EPNQPRLIHEKS-SNGSTAVMLSLVPSFKLAEQKTELIFLVDRSGSMAGSGIEQAKQALKLFLHSLPTDCYVNIAGFGFSYEELFPSSRKYDEVVL 331          
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: UPI00109B9EDF (uncharacterized protein LOC110235739 n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI00109B9EDF)

HSP 1 Score: 146 bits (368), Expect = 4.360e-36
Identity = 99/276 (35.87%), Postives = 154/276 (55.80%), Query Frame = 1
Query:    4 LVGEVQRARTANTAYVRAIEAGHTAVLVQELGQ--DLMQCFVGNIAPHSHITIAITFVTELETEEDA-LRFRLPLTHIPRF-----NAGRRAVGAPLVSQEESTFALEFTAHFSMSQPLESVTSFTHDISVDME-DNGMHGSVSLC-DAAKIDGDLDLLFSLRVSADQTREPMVVLEKHPTHDS-----KAALISFFPEIEKN--MQRTEIILLVDRSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYNEKTLATATGH 780
            +V E+Q  + A   Y  AI +GH A L++E  +  D+ Q  VGN+ PH   +I +TFVT L+ E++  + F LP    PR+     NA        L S   S ++ EF  +   +  ++ +TS  H + V++  DN    +V L  D+ K D DL++    +V  D+  EP  ++E     D         +++FFPE + +  +++ E I +VDRSGSM GS I+ A+E L +FL+SLPE+C FNIVGFG++ ++LFK S  YN+++L  A  H
Sbjct:   72 IVAEIQEKQEARDTYDDAISSGHXAFLLEESDESSDIFQINVGNLPPHQSASIELTFVTTLKVEKEGKIVFVLPTVLNPRYTPSDCNASVSTTMDSLASVS-SEYSFEFEMNVQCASSIKEITS-RHQLKVEISPDNTQQATVKLDKDSYKFDADLEV----QVLCDKPFEPYAMVENGGATDDDFLSKSVVMVNFFPEFDSSACLEKGEFIFVVDRSGSMGGSNIKSARETLLLFLKSLPEDCYFNIVGFGSSFEKLFKKSEQYNDQSLKNACSH 341          
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: A0A165A4N8_9CRUS (Uncharacterized protein n=3 Tax=Daphnia magna TaxID=35525 RepID=A0A165A4N8_9CRUS)

HSP 1 Score: 145 bits (365), Expect = 9.050e-36
Identity = 96/263 (36.50%), Postives = 146/263 (55.51%), Query Frame = 1
Query:    1 RLVGEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHITIAITFVTELETEEDALRFRLPLTHIPRF---NAGRRAVG--APLVSQEESTFALEFTAHFSMSQPLESVTSFTHDISVDMEDNGMHGSVSL-CDAAKIDGDLDLLFSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRTEIILLVDRSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYNEKTLATA 771
            R++  V +   A T Y +AI++GH+A LV+E   D+ +  +GN+A  S   I +T+VTEL+ E   +RF LP T  PR+     G  A    A +   +ES + +EF     M+  ++ + S TH I+V  +   M    +L  D      D DL+  ++++  +  +P +  EK P   S A ++S  P  +   Q+TE+I LVDRSGSM G  IE AK+AL++FL SLP +C  NI GFG +++ L+  S  Y+E  L TA
Sbjct:  100 RIIQGVAKEEEAKTDYEQAIQSGHSAFLVEEKLPDVFKAKIGNLAAGSGAKIRLTYVTELKVEGGEIRFYLPTTIAPRYVPSTDGSSAAKDLASIKYSQESHYKVEFNITVQMASAIKEIRSPTHKITVSSDAANMPTRRTLRLDDEVTSMDRDLVVYVQIA--EPHQPRITQEKSP-EGSAAMMLSLVPSFKLAEQKTELIFLVDRSGSMDGQGIEQAKQALKLFLHSLPLDCYVNIAGFGFSYEELYPSSKKYDEGVLNTA 359          
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: A0A2I1G6T1_9GLOM (VWA-like protein (Fragment) n=5 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2I1G6T1_9GLOM)

HSP 1 Score: 142 bits (357), Expect = 3.750e-35
Identity = 89/269 (33.09%), Postives = 145/269 (53.90%), Query Frame = 1
Query:   10 GEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHITIAITFVTEL--ETEEDALRFRLPLTHIPRF-----------NAGRRAVGAPLVSQEESTFALEFTAHFSMSQPLESVTSFTHDISVDM--EDNGMHGSVSLCDAAKIDGDLDLLFSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRTEIILLVDRSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYNEKTLATA 771
            G V+ A+ A   Y  AIE GH A L++    D+ QC +GNI     I + IT+V+EL  ++E + +RF LP   +PR+           N G+      ++  +E+ F L+ T    M+  ++S+ S +H IS +M  ++N     ++L D       L+  F L V +    +P   LE +P   +   +++  P+   N   TE+I +VDRSGSM    ++ A +AL++ LRS+PE+C FN+V FG+ H  LF  S +Y+E++L+ A
Sbjct:   45 GVVKEAKKAAQEYTEAIEKGHGAYLLESESADVFQCSIGNITSGQTIVVKITYVSELKHDSETEKIRFVLPTHIVPRYGSSTSTSTSSSNDGKILEPDAVLYSKEANFYLDLTVTCRMTSIIQSIESPSHKISTEMNIDENPKISKITLVDQITY---LEKDFILVVKSKDLDQPRAFLEYNPETQTNCVMLTLVPKFSLNTTITELIFVVDRSGSMSVEPMKKAAQALELLLRSIPEDCYFNVVSFGSHHDSLFPKSQLYSEESLSEA 310          
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: A0A015I439_RHIIW (Uncharacterized protein n=7 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A015I439_RHIIW)

HSP 1 Score: 142 bits (358), Expect = 7.870e-35
Identity = 89/269 (33.09%), Postives = 145/269 (53.90%), Query Frame = 1
Query:   10 GEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHITIAITFVTEL--ETEEDALRFRLPLTHIPRF-----------NAGRRAVGAPLVSQEESTFALEFTAHFSMSQPLESVTSFTHDISVDM--EDNGMHGSVSLCDAAKIDGDLDLLFSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRTEIILLVDRSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYNEKTLATA 771
            G V+ A+ A   Y  AIE GH A L++    D+ QC +GNI     I + IT+V+EL  ++E + +RF LP   +PR+           N G+      ++  +E+ F L+ T    M+  ++S+ S +H IS +M  ++N     ++L D       L+  F L V +    +P   LE +P   +   +++  P+   N   TE+I +VDRSGSM    ++ A +AL++ LRS+PE+C FN+V FG+ H  LF  S +Y+E++L+ A
Sbjct:   78 GVVKEAKKAAQEYTEAIEKGHGAYLLESESADVFQCSIGNITSGQTIVVKITYVSELKHDSETEKIRFVLPTHIVPRYGSSTSTSTSSSNDGKILEPDAVLYSKEANFYLDLTVTCRMTSIIQSIESPSHKISTEMNIDENPKISKITLADQITY---LEKDFILVVKSKDLDQPRAFLEYNPETQTNCVMLTLVPKFSLNTTITELIFVVDRSGSMSVEPMKKAAQALELLLRSIPEDCYFNVVSFGSHHDSLFPKSQLYSEESLSEA 343          
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: A0A2P4QHG1_RHIID (Uncharacterized protein (Fragment) n=2 Tax=Rhizophagus irregularis TaxID=588596 RepID=A0A2P4QHG1_RHIID)

HSP 1 Score: 139 bits (349), Expect = 8.960e-35
Identity = 87/267 (32.58%), Postives = 143/267 (53.56%), Query Frame = 1
Query:   10 GEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHITIAITFVTEL--ETEEDALRFRLPLTHIPRFNA---------GRRAVGAPLVSQEESTFALEFTAHFSMSQPLESVTSFTHDISVDM--EDNGMHGSVSLCDAAKIDGDLDLLFSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRTEIILLVDRSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYNEKTLATA 771
            G V+ A  A   Y  AIE GH A L++    D+ QC +GNI     I + IT+V+EL  ++E + +RF LP    PR+ +         G+      ++  +E+ F L+ T    M+  ++++ S +H IS +M  ++N     ++L D       L+  F L + +    +P   LE +P   +   +++  P+   N   TE+I +VDRSGSM G  ++ A EAL++ LRS+ E+C FN+V FG+ H  LF  S +Y+E++L+ A
Sbjct:   43 GIVKEANKAAKEYTEAIEKGHGAYLLESESADVFQCSIGNIKSGQTIVVKITYVSELKHDSETEKIRFVLPTYIAPRYGSSTSTSSSDYGKILKPDSVLYSKEANFYLDLTVTCRMTSIIQNIESPSHKISTEMNIDENPKISKITLVDQITY---LEKDFILVIKSKDLDQPRAFLEYNPETQTNCVMLTLVPKFSLNTTFTELIFVVDRSGSMSGEPMKKAAEALELLLRSISEDCYFNVVSFGSHHDSLFSKSQLYSEESLSEA 306          
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Match: A9RSX3_PHYPA (Predicted protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A9RSX3_PHYPA)

HSP 1 Score: 141 bits (355), Expect = 2.150e-34
Identity = 99/275 (36.00%), Postives = 147/275 (53.45%), Query Frame = 1
Query:    1 RLVGEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHITIAITFVTELETE--EDALRFRLPLTHIPRFNAGRRAVGAPLVSQEESTFALEFTAHFSMSQPLESVTSFTHDISVDMEDNGMHGSVSLCDAAKI--------------DGDLDLLFSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRT-EIILLVDRSGSMRGSRIELAKEALQIFLRSLP-ENCLFNIVGFGTTHKRLFKDSSVYNEKTLATA 771
            +++G+V+    A   Y  A+ AG TA L+ +   D+ Q  +GNI P   I+I IT V+E++ +  E+ +RF LP T  PR+ A     G P+    +S+  L      +MS+P+ SV S +H I V +      G+    D A I              D  LD    + +++    +P  ++E+HP+H + A  ++F P       RT E+I LVDRSGSM G++I+ A EAL++FLRS+P EN  FNIVGFG+ H  LF  S  Y E +L  A
Sbjct:   79 KIIGKVREKSAAKKEYQEAVSAGKTASLLDQEKPDVFQTSIGNIPPGKTISIRITLVSEIKQDAGENQVRFVLPTTVAPRYGA-IGFFGNPITPPPDSSAKLSINMSCAMSKPITSVQSPSHTIEVHL------GTTDTVDPAHISTFNPNQARVTLTVDSLLDCDLVIVINSLGLDQPRALVERHPSHGTHAIALTFQPRFALQPLRTSEMIFLVDRSGSMMGTQIKQAGEALELFLRSIPFENHYFNIVGFGSNHNFLFPTSVEYTEDSLKKA 346          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90900.21072.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E9GBR1_DAPPU9.800e-3937.88Uncharacterized protein n=3 Tax=Daphnia TaxID=6668... [more]
A0A164ND07_9CRUS1.390e-3737.31VIT domain-containing protein n=2 Tax=Daphnia magn... [more]
A0A8J2WCT1_9CRUS1.250e-3637.55Hypothetical protein n=1 Tax=Daphnia galeata TaxID... [more]
E9FQW5_DAPPU1.390e-3637.55Uncharacterized protein n=3 Tax=Daphnia TaxID=6668... [more]
UPI00109B9EDF4.360e-3635.87uncharacterized protein LOC110235739 n=1 Tax=Exaip... [more]
A0A165A4N8_9CRUS9.050e-3636.50Uncharacterized protein n=3 Tax=Daphnia magna TaxI... [more]
A0A2I1G6T1_9GLOM3.750e-3533.09VWA-like protein (Fragment) n=5 Tax=Rhizophagus ir... [more]
A0A015I439_RHIIW7.870e-3533.09Uncharacterized protein n=7 Tax=Rhizophagus irregu... [more]
A0A2P4QHG1_RHIID8.960e-3532.58Uncharacterized protein (Fragment) n=2 Tax=Rhizoph... [more]
A9RSX3_PHYPA2.150e-3436.00Predicted protein n=2 Tax=Physcomitrium patens Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90900contigM-pyrifera_M_contig90900:2..781 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score159.5
Seed ortholog evalue2.2e-36
Seed eggNOG ortholog6669.EFX83005
Hectar predicted targeting categoryother localisation
EggNOG free text desc.von Willebrand factor type A domain
EggNOG OGs2QRPK@2759,38DTU@33154,3BAKW@33208,3D0NY@33213,COG2304@1
COG Functional cat.S
Best tax levelBilateria
Best eggNOG OGNA|NA|NA
Exons1
Model size780
Cds size780
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816821.3349848-CDS-M-pyrifera_M_contig90900:1..7811622816821.3349848-CDS-M-pyrifera_M_contig90900:1..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90900 2..781 -
1692278198.275992-CDS-M-pyrifera_M_contig90900:1..7811692278198.275992-CDS-M-pyrifera_M_contig90900:1..781Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90900 2..781 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90900.21072.1prot_M-pyrifera_M_contig90900.21072.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90900 2..781 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90900.21072.1

>prot_M-pyrifera_M_contig90900.21072.1 ID=prot_M-pyrifera_M_contig90900.21072.1|Name=mRNA_M-pyrifera_M_contig90900.21072.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp
RLVGEVQRARTANTAYVRAIEAGHTAVLVQELGQDLMQCFVGNIAPHSHI
TIAITFVTELETEEDALRFRLPLTHIPRFNAGRRAVGAPLVSQEESTFAL
EFTAHFSMSQPLESVTSFTHDISVDMEDNGMHGSVSLCDAAKIDGDLDLL
FSLRVSADQTREPMVVLEKHPTHDSKAALISFFPEIEKNMQRTEIILLVD
RSGSMRGSRIELAKEALQIFLRSLPENCLFNIVGFGTTHKRLFKDSSVYN
EKTLATATGH
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mRNA from alignment at M-pyrifera_M_contig90900:2..781-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90900.21072.1 ID=mRNA_M-pyrifera_M_contig90900.21072.1|Name=mRNA_M-pyrifera_M_contig90900.21072.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig90900:2..781- (Macrocystis pyrifera P11B4 male)
CGACTGGTTGGAGAGGTACAGAGAGCTCGAACAGCAAACACTGCATATGT CAGGGCAATTGAAGCTGGTCACACAGCAGTACTTGTTCAGGAGCTCGGCC AGGACCTCATGCAGTGCTTCGTGGGCAACATTGCCCCACACTCGCACATC ACGATCGCCATCACGTTCGTGACTGAGCTTGAGACAGAGGAGGATGCCCT TCGCTTCCGGCTTCCTCTTACCCACATTCCTCGCTTCAACGCTGGGCGCC GTGCTGTAGGCGCACCTCTTGTTTCTCAGGAAGAGTCTACATTCGCCCTT GAATTCACGGCACACTTCAGCATGAGTCAGCCTTTGGAGAGCGTCACGTC CTTTACTCACGATATTAGTGTGGACATGGAGGACAACGGGATGCACGGTA GTGTCTCCCTCTGTGACGCTGCCAAGATTGATGGCGACCTCGACCTTCTC TTCTCGCTGCGAGTGAGCGCCGACCAGACCCGTGAGCCTATGGTGGTGCT GGAGAAGCATCCTACGCACGACTCGAAAGCTGCATTGATCTCTTTCTTCC CTGAGATCGAGAAGAACATGCAGAGGACTGAGATCATTCTCCTGGTGGAT CGCTCGGGCTCCATGCGTGGCTCCAGGATTGAGTTGGCCAAGGAGGCTCT CCAGATCTTCCTTCGATCACTGCCAGAGAACTGCCTCTTCAACATCGTTG GCTTTGGCACAACTCACAAGCGACTCTTCAAGGACAGCTCTGTTTACAAC GAGAAGACCCTCGCTACGGCGACTGGCCAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90900:2..781-

>mRNA_M-pyrifera_M_contig90900.21072.1 ID=mRNA_M-pyrifera_M_contig90900.21072.1|Name=mRNA_M-pyrifera_M_contig90900.21072.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig90900:2..781- (Macrocystis pyrifera P11B4 male)
CGACTGGTTGGAGAGGTACAGAGAGCTCGAACAGCAAACACTGCATATGT
CAGGGCAATTGAAGCTGGTCACACAGCAGTACTTGTTCAGGAGCTCGGCC
AGGACCTCATGCAGTGCTTCGTGGGCAACATTGCCCCACACTCGCACATC
ACGATCGCCATCACGTTCGTGACTGAGCTTGAGACAGAGGAGGATGCCCT
TCGCTTCCGGCTTCCTCTTACCCACATTCCTCGCTTCAACGCTGGGCGCC
GTGCTGTAGGCGCACCTCTTGTTTCTCAGGAAGAGTCTACATTCGCCCTT
GAATTCACGGCACACTTCAGCATGAGTCAGCCTTTGGAGAGCGTCACGTC
CTTTACTCACGATATTAGTGTGGACATGGAGGACAACGGGATGCACGGTA
GTGTCTCCCTCTGTGACGCTGCCAAGATTGATGGCGACCTCGACCTTCTC
TTCTCGCTGCGAGTGAGCGCCGACCAGACCCGTGAGCCTATGGTGGTGCT
GGAGAAGCATCCTACGCACGACTCGAAAGCTGCATTGATCTCTTTCTTCC
CTGAGATCGAGAAGAACATGCAGAGGACTGAGATCATTCTCCTGGTGGAT
CGCTCGGGCTCCATGCGTGGCTCCAGGATTGAGTTGGCCAAGGAGGCTCT
CCAGATCTTCCTTCGATCACTGCCAGAGAACTGCCTCTTCAACATCGTTG
GCTTTGGCACAACTCACAAGCGACTCTTCAAGGACAGCTCTGTTTACAAC
GAGAAGACCCTCGCTACGGCGACTGGCCATCGACTGGTTGGAGAGGTACA
GAGAGCTCGAACAGCAAACACTGCATATGTCAGGGCAATTGAAGCTGGTC
ACACAGCAGTACTTGTTCAGGAGCTCGGCCAGGACCTCATGCAGTGCTTC
GTGGGCAACATTGCCCCACACTCGCACATCACGATCGCCATCACGTTCGT
GACTGAGCTTGAGACAGAGGAGGATGCCCTTCGCTTCCGGCTTCCTCTTA
CCCACATTCCTCGCTTCAACGCTGGGCGCCGTGCTGTAGGCGCACCTCTT
GTTTCTCAGGAAGAGTCTACATTCGCCCTTGAATTCACGGCACACTTCAG
CATGAGTCAGCCTTTGGAGAGCGTCACGTCCTTTACTCACGATATTAGTG
TGGACATGGAGGACAACGGGATGCACGGTAGTGTCTCCCTCTGTGACGCT
GCCAAGATTGATGGCGACCTCGACCTTCTCTTCTCGCTGCGAGTGAGCGC
CGACCAGACCCGTGAGCCTATGGTGGTGCTGGAGAAGCATCCTACGCACG
ACTCGAAAGCTGCATTGATCTCTTTCTTCCCTGAGATCGAGAAGAACATG
CAGAGGACTGAGATCATTCTCCTGGTGGATCGCTCGGGCTCCATGCGTGG
CTCCAGGATTGAGTTGGCCAAGGAGGCTCTCCAGATCTTCCTTCGATCAC
TGCCAGAGAACTGCCTCTTCAACATCGTTGGCTTTGGCACAACTCACAAG
CGACTCTTCAAGGACAGCTCTGTTTACAACGAGAAGACCCTCGCTACGGC
GACTGGCCAT
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