prot_M-pyrifera_M_contig110076.2105.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig110076.2105.1
Unique Nameprot_M-pyrifera_M_contig110076.2105.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length112
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig110076.2105.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000772Ricin B, lectin domainPFAMPF00652Ricin_B_lectincoord: 24..112
e-value: 5.3E-10
score: 39.6
IPR000772Ricin B, lectin domainPROSITEPS50231RICIN_B_LECTINcoord: 19..112
score: 17.277
NoneNo IPR availableGENE3D2.80.10.50coord: 8..112
e-value: 4.3E-12
score: 48.3
IPR035992Ricin B-like lectinsSUPERFAMILY50370Ricin B-like lectinscoord: 17..112

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig110076contigM-pyrifera_M_contig110076:190..525 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig110076.2105.1mRNA_M-pyrifera_M_contig110076.2105.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig110076 190..525 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig110076.2105.1 ID=prot_M-pyrifera_M_contig110076.2105.1|Name=mRNA_M-pyrifera_M_contig110076.2105.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=112bp
DVTIEADVSIVNESTVGPSGDPLLSLRPCDSSAKDQLWTWSDGGDVLLHS
LMNALTSQCMDVYGCDTNPGTSAWMWECVNTTKANCESKNQQWEYNESTK
TLTTAMSTGFCL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000772Ricin_B_lectin
IPR035992Ricin_B-like_lectins