mRNA_M-pyrifera_M_contig90836.21053.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90836.21053.1
Unique NamemRNA_M-pyrifera_M_contig90836.21053.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: A0A6I6AAH6_9PLAN (PQQ-binding-like beta-propeller repeat protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AAH6_9PLAN)

HSP 1 Score: 528 bits (1361), Expect = 3.470e-174
Identity = 260/262 (99.24%), Postives = 262/262 (100.00%), Query Frame = 1
Query:    1 RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWSFEIN 786
            RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSL+EAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQP+LLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWSFEIN
Sbjct: 1070 RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLSEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPSLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWSFEIN 1331          
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: A0A517Q0V9_9PLAN (Outer membrane biogenesis protein BamB n=4 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q0V9_9PLAN)

HSP 1 Score: 476 bits (1226), Expect = 1.650e-154
Identity = 231/262 (88.17%), Postives = 246/262 (93.89%), Query Frame = 1
Query:    1 RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWSFEIN 786
            RDEQSKGQNTSLPVEIIGLTNPLFEN RLEVGPAKEQLLAFD AGKPLWTFSLAEAGIEVPQQP+FSARVFENYL+VNFGAEFFVLD +NR  DGQPTLLWKQRMI GPPSLRDYISIER+GLAPVLREYITRNSDREQLGRIGT+N EFLCYQLG +LIAADLLTGEILWKRQGL  +SWHFGDAEHVI+MTS++RTEPRYVV SG +GE VNAFKLKPG SA+FAFER+LLTLGPPAD TRR+ELRDLVSDEVVWS EI+
Sbjct: 1068 RDEQSKGQNTSLPVEIIGLTNPLFENQRLEVGPAKEQLLAFDSAGKPLWTFSLAEAGIEVPQQPYFSARVFENYLIVNFGAEFFVLDPLNRNVDGQPTLLWKQRMIPGPPSLRDYISIERTGLAPVLREYITRNSDREQLGRIGTVNEEFLCYQLGGDLIAADLLTGEILWKRQGLATSSWHFGDAEHVIVMTSENRTEPRYVVLSGSDGEVVNAFKLKPGDSAVFAFERFLLTLGPPADATRRMELRDLVSDEVVWSMEID 1329          
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: A0A350KBY5_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KBY5_9PLAN)

HSP 1 Score: 370 bits (951), Expect = 7.980e-122
Identity = 178/258 (68.99%), Postives = 214/258 (82.95%), Query Frame = 1
Query:    1 RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWS 774
            R+EQ KGQNTSL VEIIGL+N LF N+RLE+GPAKE L A+DG G+  W+FSL  A IEVPQQP+FSARVF+ YLVVNFG+EFFVLDT+NR  +G P LLWKQR+++GPPS+RDYISIER+G+APVLREYITRN+DRE LGRIGTIN EF+CYQ+GS+L+AADL TG +LWKRQG+  +S H+GDAE+VI+M  Q +TE RY V SGQNG+ VN FKL  G + IFAFERYLLTL   AD +R L+L+DL + E VWS
Sbjct:  201 REEQEKGQNTSLTVEIIGLSNTLFNNYRLEIGPAKEWLFAYDGQGQQQWSFSLLNAEIEVPQQPYFSARVFQQYLVVNFGSEFFVLDTLNRDPEGHPLLLWKQRLMSGPPSVRDYISIERTGVAPVLREYITRNADRELLGRIGTINEEFICYQIGSDLVAADLQTGNVLWKRQGIGISSRHYGDAEYVIVMVGQEQTELRYDVLSGQNGKLVNTFKLNQGETPIFAFERYLLTLTVEADQSRLLQLKDLTNAEAVWS 458          
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: A0A517VEA7_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VEA7_9PLAN)

HSP 1 Score: 378 bits (971), Expect = 5.000e-118
Identity = 181/258 (70.16%), Postives = 217/258 (84.11%), Query Frame = 1
Query:    1 RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWS 774
            R EQ+KGQNTSL VEIIGL+N LF N+RLEVGPAKE L A+DG G+P W+FSL +A IEVPQQP+FSARVF+ YLVVNFGAEFF+LDT+NR ++ +P LLWKQR+++GPPS+RDYISIER+G+APVLREY+TRN DRE LGRIGTIN EF+CYQ+GS+LIAADLLTGEILWK+QG   +S H+GDAEHVI++  Q + E RYVV SGQNG+ +N FKL  G S IFAFERYLLTL   AD+ R+L L+DL  DE +WS
Sbjct: 1050 RGEQNKGQNTSLTVEIIGLSNALFNNYRLEVGPAKEWLFAYDGQGQPQWSFSLLKAEIEVPQQPYFSARVFQQYLVVNFGAEFFILDTLNRDSEDRPLLLWKQRLMSGPPSVRDYISIERTGVAPVLREYLTRNMDRELLGRIGTINEEFICYQIGSDLIAADLLTGEILWKQQGFGISSRHYGDAEHVIVIAGQEQAEQRYVVLSGQNGDVINTFKLDQGESPIFAFERYLLTLTIEADNDRQLHLKDLTKDEEIWS 1307          
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: A0A518I6B4_9PLAN (Outer membrane biogenesis protein BamB n=2 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I6B4_9PLAN)

HSP 1 Score: 378 bits (970), Expect = 5.160e-118
Identity = 181/258 (70.16%), Postives = 217/258 (84.11%), Query Frame = 1
Query:    1 RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWS 774
            R EQSKGQNT+ PVEIIGL+NPLF N+RLEVGPAKE L A+DG GK  W FSL +A I++P QP++SARVFE+YLVVNFG+ F VLDT+NR  + QPT+LWKQR+IAGPPSLRDYISIER+G+APVLREY+TRN+DRE LGRIGTIN +FLCYQ G+ELIAADLLTG++LWKRQG+  +S HFGDA+ VI+M S  R+E RYVV SGQ+GE VNAFKL  G S IFAFERY+LT+   ADD R L+L+DL +D+ +WS
Sbjct: 1025 RGEQSKGQNTARPVEIIGLSNPLFSNYRLEVGPAKELLFAYDGQGKQQWAFSLVDAEIDLPDQPYYSARVFEHYLVVNFGSLFVVLDTLNRDVEDQPTMLWKQRLIAGPPSLRDYISIERTGVAPVLREYVTRNADRELLGRIGTINQDFLCYQRGTELIAADLLTGDVLWKRQGVITSSRHFGDADRVIVMRSTERSETRYVVLSGQSGEVVNAFKLGQGESPIFAFERYILTITKEADDVRHLKLKDLTTDQEIWS 1282          
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: A6CFB3_9PLAN (Uncharacterized protein n=7 Tax=Gimesia TaxID=1649453 RepID=A6CFB3_9PLAN)

HSP 1 Score: 368 bits (945), Expect = 2.420e-114
Identity = 177/258 (68.60%), Postives = 213/258 (82.56%), Query Frame = 1
Query:    1 RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWS 774
            R+EQ KGQNTSL VEIIGL+N LF N+RLE+GPAKE L A+DG G+  W+FSL  A IEVPQQP+FSARVF+ YLVVNFG+EFFVLDT+NR  +G P LLWKQR+++GPPS+RDYISIER+G+APVLREYITRN+DRE LGRIGTIN EF+CYQ+GS+L+AADL TG +LWKRQG+  +S H+GD E+VI+M  Q +TE RY V SGQNG+ VN FKL  G + IFAFERYLLTL   AD +R L+L+DL + E VWS
Sbjct: 1055 REEQEKGQNTSLTVEIIGLSNTLFNNYRLEIGPAKEWLFAYDGQGQQQWSFSLLNAEIEVPQQPYFSARVFQQYLVVNFGSEFFVLDTLNRDPEGHPLLLWKQRLMSGPPSVRDYISIERTGVAPVLREYITRNADRELLGRIGTINEEFICYQIGSDLVAADLQTGNVLWKRQGIGISSRHYGDDEYVIVMVGQEQTELRYDVLSGQNGKLVNTFKLNQGETPIFAFERYLLTLTVEADQSRLLQLKDLTNAEAVWS 1312          
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: A0A2E2C0C4_9PLAN (Uncharacterized protein n=6 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C0C4_9PLAN)

HSP 1 Score: 359 bits (922), Expect = 4.410e-111
Identity = 172/258 (66.67%), Postives = 214/258 (82.95%), Query Frame = 1
Query:    1 RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWS 774
            R EQ KGQNTSL VEI+GL+N LF N+RLEVGPAKE LLA+DG G+  W+FSL +A IEVPQQ FFSARVF+ YLVV+FG+EFFVLDT+NR ++ +P LLWKQ ++AGPPS+RDYI+IER+G+APVLREY+TRN+DRE LGRIGTIN +F+CYQ+GSELIAADLLTGE++WKRQG+  +S H+GDAEHVI++  Q ++E  Y V S QNG+ +N FKLK G + IFAFERYLLTL    D +R L L+DLV +E +W+
Sbjct: 1072 RGEQDKGQNTSLTVEIVGLSNALFNNYRLEVGPAKEWLLAYDGQGQLQWSFSLLKAEIEVPQQSFFSARVFQQYLVVDFGSEFFVLDTLNRDSEDRPVLLWKQTLMAGPPSVRDYITIERTGVAPVLREYVTRNADRELLGRIGTINEDFICYQIGSELIAADLLTGEVIWKRQGIGISSRHYGDAEHVIVIAGQVQSEQWYEVLSSQNGDVINTFKLKEGEAPIFAFERYLLTLTIEEDKSRLLHLKDLVKNEEIWN 1329          
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: A0A517R9N4_9PLAN (Outer membrane biogenesis protein BamB n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517R9N4_9PLAN)

HSP 1 Score: 355 bits (912), Expect = 1.190e-109
Identity = 174/265 (65.66%), Postives = 215/265 (81.13%), Query Frame = 1
Query:    1 RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRT-------EPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWS 774
            R E  +GQNTSLPVEIIGL+NPLF+N++LEVGPAKE+LLA+DG GK  W FSL EA +EVP Q +FSARVF++YLVVNFG+ F VLDT+NR  + +PTLLWKQR+IAGPPSLRDYISIER+G+APVLREYITRN+DRE LGRIGTIN +FLCYQLG++LIAA+LLTG++LWK+ G+  +S HFGDA+ VI+MT  +R+       E RY V SGQ+GE +NAFKL    S IFAFERY+LT+   AD  R L L+DL +++ +WS
Sbjct: 1069 RGEHPRGQNTSLPVEIIGLSNPLFQNYQLEVGPAKEKLLAYDGQGKQQWEFSLLEAEVEVPNQLYFSARVFQHYLVVNFGSHFIVLDTLNRDANNRPTLLWKQRLIAGPPSLRDYISIERTGVAPVLREYITRNADREILGRIGTINQDFLCYQLGTDLIAAELLTGKVLWKQPGVVTSSRHFGDADRVIVMTPIARSDTRYHTSETRYGVLSGQSGEEINAFKLGQDESPIFAFERYILTITKQADGGRNLRLKDLTTNQEIWS 1333          
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: A0A517WTF6_9PLAN (Outer membrane biogenesis protein BamB n=4 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WTF6_9PLAN)

HSP 1 Score: 331 bits (848), Expect = 8.480e-101
Identity = 161/261 (61.69%), Postives = 203/261 (77.78%), Query Frame = 1
Query:    7 EQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQS-RTEPRYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDLVSDEVVWSFEIN 786
            E  KGQN SLPVE+IGL+N LF+N+R+E+GPAKE L AFDG GK  W F L EA IEVP QP+FSARV++ YL+VNFG+ FFVLDT+N  +   P LLWKQRMIAGPPS+RDYISIER+G  PVLR+++ RN DRE LG+IG +N EF+ YQ+G+ELIAA+LLTG+ILWKRQG+ N S HFGDA+HVI++ S+S  +  RYV+ SGQNGE + +FKL  G S  FAF R+LLT      + RRL+LRDL + + +WS E++
Sbjct: 1069 EHPKGQNLSLPVELIGLSNSLFDNYRIEIGPAKEFLFAFDGQGKQQWAFPLIEAEIEVPGQPYFSARVYQQYLIVNFGSHFFVLDTLNASSTHPPELLWKQRMIAGPPSVRDYISIERNGQTPVLRDFLVRNMDRELLGKIGAVNEEFITYQIGNELIAAELLTGKILWKRQGIVNGSRHFGDADHVIVVASESFSSHSRYVLFSGQNGEVLRSFKLDEGESPKFAFNRFLLT---ETKEPRRLQLRDLTTGKAIWSQELS 1326          
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Match: UPI0014209908 (PQQ-binding-like beta-propeller repeat protein n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI0014209908)

HSP 1 Score: 78.2 bits (191), Expect = 1.190e-12
Identity = 53/190 (27.89%), Postives = 92/190 (48.42%), Query Frame = 1
Query:   37 PVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWTFSLAEAGIEVP--QQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLLWKQRMIAG----PPSLRDYISIERSGLA----PVLREYITRNSDREQLGRIGTINSEFLCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILM 576
            P+   G  +P+F +    + P +  L+A DG G+P W   + E G++VP   + F +A+   + L+V+FG+EF VL+T+    DG P +LW++  +      P       +++R  ++    P    Y   + +   LG I   N   + YQ G+ + AAD  TGEI W+ + +      F     + L+
Sbjct: 1084 PLLWRGEHSPIFADWSFTLSPTRSHLIARDGFGRPRWELQVHEDGLQVPIYNESFVAAK--GHLLLVSFGSEFMVLETLT--DDGTPRILWRRNQMEDFAEDPQGRVKGGNVQRFRMSRYAGPHRLMYEHTDDEGRPLGGITPPNDSIIVYQAGTFVRAADRYTGEIRWQYRNIARGCRIFATNSRIFLV 1269          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90836.21053.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A6I6AAH6_9PLAN3.470e-17499.24PQQ-binding-like beta-propeller repeat protein n=8... [more]
A0A517Q0V9_9PLAN1.650e-15488.17Outer membrane biogenesis protein BamB n=4 Tax=Gim... [more]
A0A350KBY5_9PLAN7.980e-12268.99Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A517VEA7_9PLAN5.000e-11870.16Outer membrane biogenesis protein BamB n=1 Tax=Gim... [more]
A0A518I6B4_9PLAN5.160e-11870.16Outer membrane biogenesis protein BamB n=2 Tax=Gim... [more]
A6CFB3_9PLAN2.420e-11468.60Uncharacterized protein n=7 Tax=Gimesia TaxID=1649... [more]
A0A2E2C0C4_9PLAN4.410e-11166.67Uncharacterized protein n=6 Tax=Planctomycetaceae ... [more]
A0A517R9N4_9PLAN1.190e-10965.66Outer membrane biogenesis protein BamB n=1 Tax=Gim... [more]
A0A517WTF6_9PLAN8.480e-10161.69Outer membrane biogenesis protein BamB n=4 Tax=Gim... [more]
UPI00142099081.190e-1227.89PQQ-binding-like beta-propeller repeat protein n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90836contigM-pyrifera_M_contig90836:2..787 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score369.8
Seed ortholog evalue1.1e-99
Seed eggNOG ortholog344747.PM8797T_06737
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG1520 FOG WD40-like repeat
EggNOG OGs2IXF0@203682,COG1520@1,COG1520@2,COG4783@1,COG4783@2
COG Functional cat.S
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size786
Cds size786
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816820.4474523-CDS-M-pyrifera_M_contig90836:1..7871622816820.4474523-CDS-M-pyrifera_M_contig90836:1..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90836 2..787 +
1692278197.774904-CDS-M-pyrifera_M_contig90836:1..7871692278197.774904-CDS-M-pyrifera_M_contig90836:1..787Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90836 2..787 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90836.21053.1prot_M-pyrifera_M_contig90836.21053.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90836 2..787 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90836.21053.1

>prot_M-pyrifera_M_contig90836.21053.1 ID=prot_M-pyrifera_M_contig90836.21053.1|Name=mRNA_M-pyrifera_M_contig90836.21053.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=262bp
RDEQSKGQNTSLPVEIIGLTNPLFENHRLEVGPAKEQLLAFDGAGKPLWT
FSLAEAGIEVPQQPFFSARVFENYLVVNFGAEFFVLDTINRKTDGQPTLL
WKQRMIAGPPSLRDYISIERSGLAPVLREYITRNSDREQLGRIGTINSEF
LCYQLGSELIAADLLTGEILWKRQGLPNNSWHFGDAEHVILMTSQSRTEP
RYVVRSGQNGESVNAFKLKPGHSAIFAFERYLLTLGPPADDTRRLELRDL
VSDEVVWSFEIN
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mRNA from alignment at M-pyrifera_M_contig90836:2..787+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90836.21053.1 ID=mRNA_M-pyrifera_M_contig90836.21053.1|Name=mRNA_M-pyrifera_M_contig90836.21053.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=786bp|location=Sequence derived from alignment at M-pyrifera_M_contig90836:2..787+ (Macrocystis pyrifera P11B4 male)
CGCGATGAGCAGTCCAAAGGTCAGAACACTTCGCTGCCGGTGGAAATTAT CGGGCTGACAAATCCTTTATTCGAAAATCATCGACTGGAAGTGGGGCCGG CGAAAGAACAGCTGCTGGCATTTGACGGTGCTGGGAAGCCGCTGTGGACC TTCTCACTGGCGGAAGCCGGGATCGAAGTTCCACAACAGCCTTTCTTCTC GGCCCGCGTATTCGAGAATTATCTGGTCGTGAATTTTGGGGCCGAATTTT TTGTGCTGGATACCATCAATCGGAAAACCGATGGTCAGCCAACCCTGCTC TGGAAACAGAGGATGATCGCCGGTCCGCCGAGCCTGCGTGATTACATTTC CATTGAACGCAGTGGTTTAGCGCCGGTGCTACGCGAATATATCACGCGGA ATTCGGATCGCGAACAACTGGGACGCATTGGCACAATCAATTCTGAATTC CTCTGCTATCAACTGGGGAGTGAATTAATCGCCGCCGATCTGCTGACTGG AGAAATTCTCTGGAAACGTCAGGGGCTGCCCAACAACAGCTGGCATTTTG GTGATGCGGAGCATGTGATTCTGATGACTTCTCAGAGCCGGACCGAGCCG CGGTATGTGGTTCGGAGTGGTCAGAATGGAGAGTCCGTCAATGCTTTCAA ACTGAAGCCAGGTCACTCGGCGATTTTTGCGTTTGAACGCTATCTGCTGA CACTGGGACCGCCCGCCGATGATACGCGTCGACTTGAATTGCGGGACCTG GTCAGCGATGAAGTGGTCTGGAGTTTCGAGATCAAC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90836:2..787+

>mRNA_M-pyrifera_M_contig90836.21053.1 ID=mRNA_M-pyrifera_M_contig90836.21053.1|Name=mRNA_M-pyrifera_M_contig90836.21053.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1572bp|location=Sequence derived from alignment at M-pyrifera_M_contig90836:2..787+ (Macrocystis pyrifera P11B4 male)
CGCGATGAGCAGTCCAAAGGTCAGAACACTTCGCTGCCGGTGGAAATTAT
CGGGCTGACAAATCCTTTATTCGAAAATCATCGACTGGAAGTGGGGCCGG
CGAAAGAACAGCTGCTGGCATTTGACGGTGCTGGGAAGCCGCTGTGGACC
TTCTCACTGGCGGAAGCCGGGATCGAAGTTCCACAACAGCCTTTCTTCTC
GGCCCGCGTATTCGAGAATTATCTGGTCGTGAATTTTGGGGCCGAATTTT
TTGTGCTGGATACCATCAATCGGAAAACCGATGGTCAGCCAACCCTGCTC
TGGAAACAGAGGATGATCGCCGGTCCGCCGAGCCTGCGTGATTACATTTC
CATTGAACGCAGTGGTTTAGCGCCGGTGCTACGCGAATATATCACGCGGA
ATTCGGATCGCGAACAACTGGGACGCATTGGCACAATCAATTCTGAATTC
CTCTGCTATCAACTGGGGAGTGAATTAATCGCCGCCGATCTGCTGACTGG
AGAAATTCTCTGGAAACGTCAGGGGCTGCCCAACAACAGCTGGCATTTTG
GTGATGCGGAGCATGTGATTCTGATGACTTCTCAGAGCCGGACCGAGCCG
CGGTATGTGGTTCGGAGTGGTCAGAATGGAGAGTCCGTCAATGCTTTCAA
ACTGAAGCCAGGTCACTCGGCGATTTTTGCGTTTGAACGCTATCTGCTGA
CACTGGGACCGCCCGCCGATGATACGCGTCGACTTGAATTGCGGGACCTG
GTCAGCGATGAAGTGGTCTGGAGTTTCGAGATCAACCGCGATGAGCAGTC
CAAAGGTCAGAACACTTCGCTGCCGGTGGAAATTATCGGGCTGACAAATC
CTTTATTCGAAAATCATCGACTGGAAGTGGGGCCGGCGAAAGAACAGCTG
CTGGCATTTGACGGTGCTGGGAAGCCGCTGTGGACCTTCTCACTGGCGGA
AGCCGGGATCGAAGTTCCACAACAGCCTTTCTTCTCGGCCCGCGTATTCG
AGAATTATCTGGTCGTGAATTTTGGGGCCGAATTTTTTGTGCTGGATACC
ATCAATCGGAAAACCGATGGTCAGCCAACCCTGCTCTGGAAACAGAGGAT
GATCGCCGGTCCGCCGAGCCTGCGTGATTACATTTCCATTGAACGCAGTG
GTTTAGCGCCGGTGCTACGCGAATATATCACGCGGAATTCGGATCGCGAA
CAACTGGGACGCATTGGCACAATCAATTCTGAATTCCTCTGCTATCAACT
GGGGAGTGAATTAATCGCCGCCGATCTGCTGACTGGAGAAATTCTCTGGA
AACGTCAGGGGCTGCCCAACAACAGCTGGCATTTTGGTGATGCGGAGCAT
GTGATTCTGATGACTTCTCAGAGCCGGACCGAGCCGCGGTATGTGGTTCG
GAGTGGTCAGAATGGAGAGTCCGTCAATGCTTTCAAACTGAAGCCAGGTC
ACTCGGCGATTTTTGCGTTTGAACGCTATCTGCTGACACTGGGACCGCCC
GCCGATGATACGCGTCGACTTGAATTGCGGGACCTGGTCAGCGATGAAGT
GGTCTGGAGTTTCGAGATCAAC
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