mRNA_M-pyrifera_M_contig90753.21034.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90753.21034.1
Unique NamemRNA_M-pyrifera_M_contig90753.21034.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: A0A6M0EQ88_9CYAN (ABC exporter membrane fusion protein n=4 Tax=Cyanobacteria TaxID=1117 RepID=A0A6M0EQ88_9CYAN)

HSP 1 Score: 139 bits (350), Expect = 6.040e-35
Identity = 89/262 (33.97%), Postives = 140/262 (53.44%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELSIEQAKF-AKMDIAAQEGQVQLHEANLELAQRDLERMEGL-DASLVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQQVEMSVIRAPIAGRIIKIFTWPGETIGQQPVLQMTDTSDIVAIAEVYETDIRWVEVGQPAEI 780
            ALGRLEP   ++ +  ++G R+ +L+VSEGDLV     LAY++SY                    L AET Y +  I+EA   I+Q +     +IAAQ+  V+  EA L LA  D  R E L     + +Q+L+ Q+   R  + +L  A+ TL +++ A + +L                    + L S Q  ++LA+ ++E ++I++P AGRI+ IFT  GE I  + +L + DT+ + A+AEVYETD+  V++GQP  +
Sbjct:   91 ALGRLEPQGEVIRVSGLSGERISKLQVSEGDLVATGEVLAYLESYEERLAERDFAASQLAEAQAKLQAETTYGRAKIQEATTHIQQIERPTTFEIAAQQATVRQLEAELALANEDWRRFEDLYSEGAITKQELDQQRTKARETQEQLNNAQATLIRLEQARDTDLRYAQTQLHSAHADLNLAQVEVALGSAQKNLKLAQTRLERTIIKSPTAGRILTIFTKAGEAIDSEGILDLGDTTQMYAVAEVYETDVGLVKMGQPVTV 352          
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: A0A6P0T9E2_9CYAN (HlyD family efflux transporter periplasmic adaptor subunit n=1 Tax=Cyanothece sp. SIO2G6 TaxID=2607797 RepID=A0A6P0T9E2_9CYAN)

HSP 1 Score: 132 bits (333), Expect = 8.040e-33
Identity = 87/262 (33.21%), Postives = 135/262 (51.53%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELSIEQAKFAK-MDIAAQEGQVQLHEANLELAQRDLERMEGL-DASLVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQQVEMSVIRAPIAGRIIKIFTWPGETIGQQPVLQMTDTSDIVAIAEVYETDIRWVEVGQPAEI 780
            ALGR+EP   ++ +    G RL RL+V EGD V A   LAY++SY                    L AET + +  I      I+QA   + ++I AQ+  ++  EA L L Q DLER + L     + EQQ + QQ   R  E  L  AK TL +++ +   ++ +                  + + S +  +ELA+ ++E ++IRAP  GR++++ T+ GE I    +L + +TS +V +AEVYETD+  VE+GQPA +
Sbjct:   58 ALGRVEPQGEVIRVSGPTGDRLDRLEVEEGDRVSAGQILAYLESYDEREAERDYAAAQLAEAERNLVAETSFGEAQIXXXXARIQQADRPRSLEIEAQQATIRRLEAELALVQEDLERFDNLFREGAIAEQQFDEQQTATRRIEEDLNNAKATLVQLEESRTTDMAVAQQQLQSAQASLTRSQVQVTIDSARRNLELAEARLERTLIRAPRDGRVLRVLTYAGEAIANDGILDLGNTSQMVIVAEVYETDVSLVELGQPATV 319          
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: A0A6M8B9W7_9CYAN (HlyD family efflux transporter periplasmic adaptor subunit n=4 Tax=Thermoleptolyngbya TaxID=2303528 RepID=A0A6M8B9W7_9CYAN)

HSP 1 Score: 127 bits (320), Expect = 5.970e-31
Identity = 96/270 (35.56%), Postives = 140/270 (51.85%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELSIEQAKF-AKMDIAAQEGQVQLHEANLELAQRDLERMEGLDAS-LVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQ-------QVEMSVIRAPIAGRIIKIFTWPGETIGQQ-PVLQMTDTSDIVAIAEVYETDIRWVEVGQPAEI 780
            ALGRLEP   ++ +G   G R+ RL+V +GD+V+    LAY++SY                    L A T +AQ          E+ +  A+ ++ AQ+  V+  EA+L    +DL R E L A   + +Q+ + Q+   R +E KL  A+  L +++A  + +L                    +PL+ +Q AVE A+Q       Q+E ++IRAP AGRI++I T  GETIGQ   VL M DTS +  +AEVYETD+  V VGQPA I
Sbjct:   59 ALGRLEPRGEVVRVGGPTGERIQRLEVRQGDIVQTGTVLAYLESYDERRAQRDVAAAQLAEAEQRLRATTTFAQXXXXXXXXXXERIQSPAQFELQAQQALVRELEADLAQKNQDLRRFEDLYAQGAISQQERDRQRSTARQSEEKLNNARANLVRLEADLQASLR-------SAQATVQAQEANLPLSQVQVAVESARQNLNLAEAQLERTIIRAPQAGRILRILTLAGETIGQDGSVLDMGDTSQMFVVAEVYETDVGLVRVGQPAMI 321          
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: UPI0019EC8AA3 (Efflux RND transporter periplasmic adaptor subunit n=1 Tax=Leptolyngbyaceae cyanobacterium M65_K2018_010 TaxID=2747810 RepID=UPI0019EC8AA3)

HSP 1 Score: 125 bits (314), Expect = 4.440e-30
Identity = 91/264 (34.47%), Postives = 139/264 (52.65%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELSIEQA-KFAKMDIAAQEGQVQLHEANLELAQRDLERMEGLDAS-LVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQQVEMSVIRAPIAGRIIKIFTWPGETIGQQ--PVLQMTDTSDIVAIAEVYETDIRWVEVGQPAEI 780
            ALGR+EP+  ++++ A    R+  L V++GD+VE    LAY+D Y                    LAAET   Q  ++EA+  I Q  +  +  IAAQ   +Q  +A L++A+ DL R + L+ S  +  Q+L+ Q+  V    A L+ AK T ++++ A   +L+                     + S    + LA+ Q+E+ VIRAP AG+++ IF +PGE + Q   PVL + DT  +  +AEVYETDI  V+VGQPA I
Sbjct:   58 ALGRVEPASRVIDVAASDAGRIASLLVAKGDVVEKGQVLAYLDRYPVRQAERDYAASQLAEARAQLAAETSLGQAQVQEADTRISQIDQPQRAAIAAQAAAIQGLQAELDVAEIDLARFQQLNESGALSRQELDRQRATVNRLRADLSNAKATQQRLEQARLNDLKNAAAQRGAAQAQATLAQVQSRVNSAAQNLALAESQLELMVIRAPQAGQVLDIFAYPGEAVSQTGGPVLALGDTRQMYVVAEVYETDIGLVQVGQPATI 321          
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: W4LQE9_9BACT (Uncharacterized protein n=2 Tax=Candidatus Entotheonella TaxID=93171 RepID=W4LQE9_9BACT)

HSP 1 Score: 124 bits (310), Expect = 2.060e-29
Identity = 101/278 (36.33%), Postives = 142/278 (51.08%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELSIEQA-------------------KFAKMDIAAQEGQVQLHEANLELAQRDLERMEGLDAS-LVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQQVEMSVIRAPIAGRIIKIFTWPGETIGQQPVLQMTDTSDIVAIAEVYETDIRWVEVGQPA 774
            ALGRL P   I+N+G     RLG L V EG  V+    LAY++S                       AET YA+  +R+AE   +                     +   +DI AQE Q++  EA L  A  DL R EGL     + +Q+++HQ+L VR    ++   +  L K +A  E NL L        XXXXXXXXX   L++LQ  + LA+ ++  SV+R+PI G+I++I   PGE + Q+P+L+M +T  +  IAEVYETDI  V +GQ A
Sbjct:   66 ALGRLAPEGNIVNIGVTGSERLGHLLVQEGQSVKRGDELAYLESRQERL------------------AETAYAESQLRDAEARFQAXXXXXXXXXXXXXXXLQQLREVPLLDIRAQEAQMRRLEAELAGAVTDLNRFEGLHRKGTISQQEMDHQRLQVRRLREEINQTQAILAKRKAEYETNLSLARASLQTAXXXXXXXXXXXQLSALQQNLALAQARLTRSVLRSPIDGQILQILPHPGEPLAQKPLLKMANTKQMYVIAEVYETDIGLVRIGQQA 325          
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: UPI0003817C72 (HlyD family efflux transporter periplasmic adaptor subunit n=1 Tax=Pseudanabaena sp. PCC 6802 TaxID=118173 RepID=UPI0003817C72)

HSP 1 Score: 123 bits (309), Expect = 2.320e-29
Identity = 85/262 (32.44%), Postives = 137/262 (52.29%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELSIEQAKFAK-MDIAAQEGQVQLHEANLELAQRDLERMEGL-DASLVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQQVEMSVIRAPIAGRIIKIFTWPGETIGQQPVLQMTDTSDIVAIAEVYETDIRWVEVGQPAEI 780
            ALGRLEP   ++ +G   G R+ +L V EG+ VE    LAY++SY                    L A T Y+Q  I+EA   I+Q +  +  +I AQ+  ++  EA L LA  DL+R + L +   + +Q L+ Q   V   +A++T+AK TL K++   + +++                   + L S +  ++LA+ ++E ++IRA  +GR+++I T  GE IG   +L + +T  +  +AEVYETD+  V VGQP  I
Sbjct:   61 ALGRLEPQGEVIRVGGPNGERIRQLTVKEGNFVEKGTILAYLESYIERLAERDLAASQVAEAEQRLKASTDYSQSQIQEASTRIQQIERPRAFEIDAQKAAIRKLEAELALANIDLQRNQSLLNDGAIAKQALDRQVSQVEQLQAQVTSAKATLIKLETGWQTDMQNAKAQMRSQEANLPLTQIQVALRSARQNLKLAEARLERTLIRATKSGRVLRIITHEGEAIGSNGILDLGNTRQMYVVAEVYETDVGLVAVGQPVTI 322          
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: A0A1B1TXW2_9SYNE (Uncharacterized protein n=2 Tax=Synechococcus sp. PCC 7117 TaxID=195498 RepID=A0A1B1TXW2_9SYNE)

HSP 1 Score: 122 bits (305), Expect = 3.750e-29
Identity = 88/264 (33.33%), Postives = 140/264 (53.03%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELS---IEQAKFAKMDIAAQEGQVQLHEANLELAQRDLERMEGL-DASLVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQQVEMSVIRAPIAGRIIKIFTWPGETIGQQPVLQMTDTSDIVAIAEVYETDIRWVEVGQPAEI 780
            A+GRLEP   IL +  + G+R+  + V EG+ VE    LA++  Y                      AET  A+  ++E++     I+Q + +  +I AQ+  ++  +  LE +    ER   L D   + +Q LE Q+LLV  A+ K+  A+ T +++  +   +L+                   IPL S Q  +ELA+ Q+E ++IRAP +GRI+K+FT PGE +  + +L++ DT ++ AIAEVYETDI  V+VGQ A+I
Sbjct:   14 AVGRLEPKGEILTISGLLGSRVAEITVQEGNWVEKGQILAFLSDYQVQLSRRNFAASRVRELFAQFQAETNAAKIQVQESQAQLRLIDQPQAS--EIEAQQAVLEGAKVELENSTIRYERYRQLRDNGAISDQALEDQRLLVEQAQTKVEQAQATFDRLTYSRLSSLQKANITVNYSQANLEQIKNRIPLESAQRELELAEAQLEQTIIRAPESGRILKVFTHPGEALDSRGLLELGDTRNMYAIAEVYETDITRVKVGQVAKI 275          
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: B8HSS6_CYAP4 (ABC exporter membrane fusion protein, DevB family n=1 Tax=Cyanothece sp. (strain PCC 7425 / ATCC 29141) TaxID=395961 RepID=B8HSS6_CYAP4)

HSP 1 Score: 122 bits (307), Expect = 5.080e-29
Identity = 90/265 (33.96%), Postives = 138/265 (52.08%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGT---RLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELSIEQAKFAKMD-IAAQEGQVQLHEANLELAQRDLERMEGLDAS-LVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQQVEMSVIRAPIAGRIIKIFTWPGETIGQQPVLQMTDTSDIVAIAEVYETDIRWVEVGQPAEI 780
            ALGRLEP   +LN+    G    R+G+L V EG  V+    LAY++SY                    L AET Y +  I+EA   +      K   I AQ+  ++  +A L  AQRDL R   L A   V +Q L+ + L V+S + +L+ A+ TL ++Q     +L+                   + +AS  S ++LA+ +++ ++I AP +G+I+KI T  GE+IG + +L+M +T  +  +AEVYETDI  ++VGQPA I
Sbjct:   61 ALGRLEPEGEVLNVSGPNGPNGERIGQLLVREGQFVKTGQTLAYLESYEERLAERDLAANQLAEAQARLKAETSYGRAQIQEARSRVAMVTNPKSAAILAQQATIERIQAELINAQRDLRRFAQLQAEGAVSQQALDDRNLAVKSKQQELSNAQSTLAQLQQEKVTDLDNANAQLSSAQAELARSQTQVQIASAASNLKLAQARLDRTMITAPQSGQILKIHTHSGESIGDKGILEMGNTRQMSVVAEVYETDIAKIKVGQPATI 325          
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: A0A1Z4R577_9CYAN (Cyclic nucleotide modulated ABC exporter membrane fusion protein n=1 Tax=Calothrix sp. NIES-4101 TaxID=2005461 RepID=A0A1Z4R577_9CYAN)

HSP 1 Score: 122 bits (305), Expect = 8.570e-29
Identity = 86/262 (32.82%), Postives = 138/262 (52.67%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELSIEQAKFAKM-DIAAQEGQVQLHEANLELAQRDLERMEGLDAS-LVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQQVEMSVIRAPIAGRIIKIFTWPGETIGQQPVLQMTDTSDIVAIAEVYETDIRWVEVGQPAEI 780
            ALGRLEP   +L++    G R+ RL+V EGD V+    LAY+++Y                    +  + + A+  I++++  I+Q    +M    +Q+  ++  +A L  A R  +R   L A   +  Q LE ++L VR A  ++  ++QTL ++  +   NL+                     LAS    ++ A+ Q+E S+IR+P AG+I+KIFT PGE I QQ VL++ DT  + A+AEVYETD+++V +GQ A I
Sbjct:   54 ALGRLEPKGQMLSIAGPIGERIVRLEVEEGDWVKPGQILAYLETYRFHSAQRDLAASRIAEIKEQIETDKLAAKVQIQQSKAQIQQIDQPQMLQSQSQKASLRSFQAELASANRTRDRYRQLYAEGAISRQTLEDKELAVRQALERVNQSQQTLNQLVRSRNTNLQKAKVDLTYTQANLARIDTHSGLASAIQQLKSAEAQLEQSIIRSPKAGKILKIFTHPGEAISQQGVLRLGDTRTMYAVAEVYETDVKFVNLGQRASI 315          
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Match: A0A1U7IYQ5_9CYAN (HlyD family secretion protein n=12 Tax=Cyanobacteria/Melainabacteria group TaxID=1798711 RepID=A0A1U7IYQ5_9CYAN)

HSP 1 Score: 122 bits (305), Expect = 8.700e-29
Identity = 84/264 (31.82%), Postives = 135/264 (51.14%), Query Frame = 1
Query:    1 ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYAXXXXXXXXXXXXXXXXXXXLAAETVYAQRMIREAELSIEQAKFAKMD-IAAQEGQVQLHEANLELAQRDLERMEGLDAS-LVPEQQLEHQQLLVRSAEAKLTAAKQTLEKMQAADELNLELXXXXXXXXXXXXXXXXXGIPLASLQSAVELAKQQVEMSVIRAPIAGRIIKIFTWPGETIGQQ--PVLQMTDTSDIVAIAEVYETDIRWVEVGQPAEI 780
            ALGR+EP+  ++++      R+ RL+V +GD V+A   LAY+D+Y                    LAAET      ++EA   + Q    +   IAAQ+  V+  +A L +A+ DL R + L+ S  +  Q+L+ QQ  V S  A L  A+ T ++++ A   ++                      + S    + LA+ Q+  +++R+P AG+++ +F +PGE +     P+L + DT  +V +AEVYETDI  VEVGQPA I
Sbjct:   58 ALGRIEPASRVIDVATAEAGRIDRLEVEKGDQVQAGQVLAYLDTYDVRRAERDVAASQLAEARAQLAAETTLGNSQVQEASTRVGQIDGPQQAAIAAQQSAVESLQAELSVAEIDLARFQALNESGAISRQELDRQQATVNSLRADLGNAQATKQRLEQARLSDIRNAQAQVVSARATTTRAQVASQVDSAAQNLALAEAQLARTIVRSPQAGQVLDVFAYPGEAVSPADGPILALGDTRQMVVVAEVYETDIGLVEVGQPATI 321          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90753.21034.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6M0EQ88_9CYAN6.040e-3533.97ABC exporter membrane fusion protein n=4 Tax=Cyano... [more]
A0A6P0T9E2_9CYAN8.040e-3333.21HlyD family efflux transporter periplasmic adaptor... [more]
A0A6M8B9W7_9CYAN5.970e-3135.56HlyD family efflux transporter periplasmic adaptor... [more]
UPI0019EC8AA34.440e-3034.47Efflux RND transporter periplasmic adaptor subunit... [more]
W4LQE9_9BACT2.060e-2936.33Uncharacterized protein n=2 Tax=Candidatus Entothe... [more]
UPI0003817C722.320e-2932.44HlyD family efflux transporter periplasmic adaptor... [more]
A0A1B1TXW2_9SYNE3.750e-2933.33Uncharacterized protein n=2 Tax=Synechococcus sp. ... [more]
B8HSS6_CYAP45.080e-2933.96ABC exporter membrane fusion protein, DevB family ... [more]
A0A1Z4R577_9CYAN8.570e-2932.82Cyclic nucleotide modulated ABC exporter membrane ... [more]
A0A1U7IYQ5_9CYAN8.700e-2931.82HlyD family secretion protein n=12 Tax=Cyanobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90753contigM-pyrifera_M_contig90753:5..784 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score123.2
Seed ortholog evalue1.7e-25
Seed eggNOG ortholog118173.KB235914_gene2669
KEGG koko:K02005
Hectar predicted targeting categoryother localisation
EggNOG free text desc.HlyD family secretion protein
EggNOG OGs1GQNG@1117,1HE8I@1150,COG1566@1,COG1566@2
COG Functional cat.V
Best tax levelOscillatoriales
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size780
Cds size780
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816819.4785368-CDS-M-pyrifera_M_contig90753:4..7841622816819.4785368-CDS-M-pyrifera_M_contig90753:4..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90753 5..784 -
1692278197.1575222-CDS-M-pyrifera_M_contig90753:4..7841692278197.1575222-CDS-M-pyrifera_M_contig90753:4..784Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90753 5..784 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90753.21034.1prot_M-pyrifera_M_contig90753.21034.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90753 5..784 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90753.21034.1

>prot_M-pyrifera_M_contig90753.21034.1 ID=prot_M-pyrifera_M_contig90753.21034.1|Name=mRNA_M-pyrifera_M_contig90753.21034.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp
ALGRLEPSVGILNLGAMAGTRLGRLKVSEGDLVEADGALAYVDSYALRVA
QYESAEAQLKEAEAKLAAETVYAQRMIREAELSIEQAKFAKMDIAAQEGQ
VQLHEANLELAQRDLERMEGLDASLVPEQQLEHQQLLVRSAEAKLTAAKQ
TLEKMQAADELNLELAEAKLATAQSSLPRLKAGIPLASLQSAVELAKQQV
EMSVIRAPIAGRIIKIFTWPGETIGQQPVLQMTDTSDIVAIAEVYETDIR
WVEVGQPAEI
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mRNA from alignment at M-pyrifera_M_contig90753:5..784-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90753.21034.1 ID=mRNA_M-pyrifera_M_contig90753.21034.1|Name=mRNA_M-pyrifera_M_contig90753.21034.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig90753:5..784- (Macrocystis pyrifera P11B4 male)
GCCCTGGGTCGCTTGGAACCAAGCGTGGGGATCCTCAATTTGGGGGCTAT GGCGGGTACACGCCTGGGTCGGCTTAAAGTGAGCGAAGGTGACCTTGTGG AAGCCGACGGGGCATTGGCCTACGTCGATTCCTATGCTCTGCGTGTCGCC CAATACGAGTCGGCCGAGGCCCAACTCAAAGAAGCCGAGGCGAAGCTCGC AGCCGAAACGGTTTACGCTCAGCGGATGATTCGCGAAGCCGAACTATCGA TCGAACAGGCAAAGTTCGCCAAGATGGATATCGCGGCCCAAGAAGGACAA GTTCAGTTGCACGAAGCGAATCTCGAACTGGCCCAACGCGATCTAGAGCG GATGGAAGGGCTAGACGCTTCGCTCGTTCCCGAACAGCAGCTCGAACATC AACAACTGCTGGTACGCAGTGCTGAAGCAAAACTGACTGCCGCGAAGCAG ACTCTGGAAAAAATGCAGGCTGCTGATGAACTGAACCTTGAATTGGCCGA GGCCAAGCTGGCCACCGCGCAGAGTTCACTGCCACGCCTGAAGGCCGGCA TCCCGCTCGCCTCGTTGCAATCGGCGGTCGAACTCGCCAAGCAGCAGGTT GAAATGAGCGTTATCCGAGCCCCCATTGCGGGCCGAATCATCAAGATCTT TACTTGGCCCGGCGAAACCATTGGCCAGCAGCCTGTTCTCCAGATGACCG ACACGTCGGACATCGTCGCCATTGCCGAGGTGTACGAAACCGACATTCGC TGGGTTGAAGTAGGTCAGCCGGCCGAAATA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90753:5..784-

>mRNA_M-pyrifera_M_contig90753.21034.1 ID=mRNA_M-pyrifera_M_contig90753.21034.1|Name=mRNA_M-pyrifera_M_contig90753.21034.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig90753:5..784- (Macrocystis pyrifera P11B4 male)
GCCCTGGGTCGCTTGGAACCAAGCGTGGGGATCCTCAATTTGGGGGCTAT
GGCGGGTACACGCCTGGGTCGGCTTAAAGTGAGCGAAGGTGACCTTGTGG
AAGCCGACGGGGCATTGGCCTACGTCGATTCCTATGCTCTGCGTGTCGCC
CAATACGAGTCGGCCGAGGCCCAACTCAAAGAAGCCGAGGCGAAGCTCGC
AGCCGAAACGGTTTACGCTCAGCGGATGATTCGCGAAGCCGAACTATCGA
TCGAACAGGCAAAGTTCGCCAAGATGGATATCGCGGCCCAAGAAGGACAA
GTTCAGTTGCACGAAGCGAATCTCGAACTGGCCCAACGCGATCTAGAGCG
GATGGAAGGGCTAGACGCTTCGCTCGTTCCCGAACAGCAGCTCGAACATC
AACAACTGCTGGTACGCAGTGCTGAAGCAAAACTGACTGCCGCGAAGCAG
ACTCTGGAAAAAATGCAGGCTGCTGATGAACTGAACCTTGAATTGGCCGA
GGCCAAGCTGGCCACCGCGCAGAGTTCACTGCCACGCCTGAAGGCCGGCA
TCCCGCTCGCCTCGTTGCAATCGGCGGTCGAACTCGCCAAGCAGCAGGTT
GAAATGAGCGTTATCCGAGCCCCCATTGCGGGCCGAATCATCAAGATCTT
TACTTGGCCCGGCGAAACCATTGGCCAGCAGCCTGTTCTCCAGATGACCG
ACACGTCGGACATCGTCGCCATTGCCGAGGTGTACGAAACCGACATTCGC
TGGGTTGAAGTAGGTCAGCCGGCCGAAATAGCCCTGGGTCGCTTGGAACC
AAGCGTGGGGATCCTCAATTTGGGGGCTATGGCGGGTACACGCCTGGGTC
GGCTTAAAGTGAGCGAAGGTGACCTTGTGGAAGCCGACGGGGCATTGGCC
TACGTCGATTCCTATGCTCTGCGTGTCGCCCAATACGAGTCGGCCGAGGC
CCAACTCAAAGAAGCCGAGGCGAAGCTCGCAGCCGAAACGGTTTACGCTC
AGCGGATGATTCGCGAAGCCGAACTATCGATCGAACAGGCAAAGTTCGCC
AAGATGGATATCGCGGCCCAAGAAGGACAAGTTCAGTTGCACGAAGCGAA
TCTCGAACTGGCCCAACGCGATCTAGAGCGGATGGAAGGGCTAGACGCTT
CGCTCGTTCCCGAACAGCAGCTCGAACATCAACAACTGCTGGTACGCAGT
GCTGAAGCAAAACTGACTGCCGCGAAGCAGACTCTGGAAAAAATGCAGGC
TGCTGATGAACTGAACCTTGAATTGGCCGAGGCCAAGCTGGCCACCGCGC
AGAGTTCACTGCCACGCCTGAAGGCCGGCATCCCGCTCGCCTCGTTGCAA
TCGGCGGTCGAACTCGCCAAGCAGCAGGTTGAAATGAGCGTTATCCGAGC
CCCCATTGCGGGCCGAATCATCAAGATCTTTACTTGGCCCGGCGAAACCA
TTGGCCAGCAGCCTGTTCTCCAGATGACCGACACGTCGGACATCGTCGCC
ATTGCCGAGGTGTACGAAACCGACATTCGCTGGGTTGAAGTAGGTCAGCC
GGCCGAAATA
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