mRNA_M-pyrifera_M_contig90730.21028.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90730.21028.1
Unique NamemRNA_M-pyrifera_M_contig90730.21028.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: A0A7S4I4V0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I4V0_9EUKA)

HSP 1 Score: 295 bits (756), Expect = 8.600e-97
Identity = 145/183 (79.23%), Postives = 165/183 (90.16%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKSSNLPSLMNVMMQLRKCCNHPFLLK 549
            FNVLITTYEM ++D A L GIRW+YLAVDEAHRLKNK+C+LI  LRTF FDHLLLLTGTPLQNNTEELWTLLN M+P +FESL +F E+FG LKE +QVE LH +LRP+LLRRMKEDVEKSIAPKEETIVEVELT  QKKYYRAIFE+NF SL+MG+K+SN+PSL+NVMMQLRKCCNHP+LL+
Sbjct:  137 FNVLITTYEMVITDVAYLGGIRWKYLAVDEAHRLKNKNCKLINVLRTFYFDHLLLLTGTPLQNNTEELWTLLNLMDPEKFESLDEFSEQFGSLKETAQVEALHAVLRPYLLRRMKEDVEKSIAPKEETIVEVELTTIQKKYYRAIFEKNFSSLNMGSKASNVPSLLNVMMQLRKCCNHPYLLR 319
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: A0A7S4I499_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I499_9EUKA)

HSP 1 Score: 290 bits (741), Expect = 2.370e-95
Identity = 141/183 (77.05%), Postives = 163/183 (89.07%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKSSNLPSLMNVMMQLRKCCNHPFLLK 549
            FNVLITTYEM L+D ++LS I W+YLAVDEAHRLKN  C+LI  LR F FDHLLLLTGTPLQNNTEELWTLLNFM+P +FES+ +F + FG+LKE  QVE+LHE+LRP+LLRRMKEDVEK+IAPKEETIVEVELT  QK YYRAIFERNF SL+MGAK+SN+PSL+N+MMQLRKCCNHP+LL+
Sbjct:   58 FNVLITTYEMVLTDMSILSKIHWKYLAVDEAHRLKNTKCKLINALRVFHFDHLLLLTGTPLQNNTEELWTLLNFMDPDKFESVEEFSKRFGDLKETKQVEELHEVLRPYLLRRMKEDVEKTIAPKEETIVEVELTTIQKSYYRAIFERNFASLNMGAKASNVPSLLNIMMQLRKCCNHPYLLR 240
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: D3BJ98_POLPP (Myb domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BJ98_POLPP)

HSP 1 Score: 268 bits (685), Expect = 7.810e-80
Identity = 133/183 (72.68%), Postives = 155/183 (84.70%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKSSNLPSLMNVMMQLRKCCNHPFLLK 549
            FN LITTYEM +SD A LS I WRYL +DEAHRLKNK C+L   LRT+++DHLLLLTGTPLQNNT+ELW+LLNFMEP +F  L +FLEEFG+LK+A QV KL E+LRP+LLRRMKE+VEKSIAPKEETIVEVELT  QKKYYRAI+E+NF  L  G K  N PSL+N+MM+LRKCCNHP+L+K
Sbjct:  548 FNTLITTYEMVISDRAQLSKIHWRYLVIDEAHRLKNKSCKLTNELRTYKYDHLLLLTGTPLQNNTQELWSLLNFMEPEKFAHLEEFLEEFGDLKQAEQVTKLQEVLRPYLLRRMKENVEKSIAPKEETIVEVELTTIQKKYYRAIYEKNFTFLRKGGKG-NGPSLLNIMMELRKCCNHPYLIK 729
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: UPI000644B892 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644B892)

HSP 1 Score: 263 bits (671), Expect = 5.870e-78
Identity = 128/183 (69.95%), Postives = 154/183 (84.15%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKSSNLPSLMNVMMQLRKCCNHPFLLK 549
            F+ LITTYEM +SD + LS I WRYL +DEAHRLKNK C+L T LRT+++DHLLLLTGTPLQNNT+ELW+LLNFM+P  F SL  FL ++G+LKEA QV  L E+L+P++LRRMKE+VEKSIAPKEETIVEVELT  QKKYYRAI+ERNF  L  G K+S  PSL+N+MM+LRKCCNHP+L+K
Sbjct:  549 FHTLITTYEMVISDRSFLSKIHWRYLVIDEAHRLKNKSCKLTTELRTYKYDHLLLLTGTPLQNNTQELWSLLNFMDPAHFTSLDSFLADYGDLKEAEQVASLQEVLKPYILRRMKENVEKSIAPKEETIVEVELTTVQKKYYRAIYERNFTFLRKGGKNSG-PSLLNIMMELRKCCNHPYLIK 730
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: F0ZFE1_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZFE1_DICPU)

HSP 1 Score: 260 bits (665), Expect = 3.800e-77
Identity = 126/183 (68.85%), Postives = 151/183 (82.51%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKSSNLPSLMNVMMQLRKCCNHPFLLK 549
            FNVLITTYEM +SD + LS I+W+YL +DEAHRLKNK C+L + L+T+ FDHLLLLTGTPLQNNT+ELW LLNF+EP +F  L +FL EFG+LK+A QV KL  +L+P+LLRRMKE VEKSIAPKEETIVEVELT  QKKYYRAI+E+NF  L    K    PSL+N+MM+LRKCCNHP+L+K
Sbjct:  601 FNVLITTYEMAISDRSYLSKIKWKYLVIDEAHRLKNKQCKLTSELKTYHFDHLLLLTGTPLQNNTQELWALLNFLEPSKFNKLAEFLVEFGDLKQAEQVSKLQNLLKPYLLRRMKERVEKSIAPKEETIVEVELTMVQKKYYRAIYEKNFAFLRKNCKGQQGPSLLNIMMELRKCCNHPYLIK 783
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: Q54UZ8_DICDI (CHD gene family protein containing chromodomain, helicase domain, and DNA-binding domain n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54UZ8_DICDI)

HSP 1 Score: 258 bits (660), Expect = 1.790e-76
Identity = 127/183 (69.40%), Postives = 152/183 (83.06%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKSSNLPSLMNVMMQLRKCCNHPFLLK 549
            FNVLITTYEM ++D   LS I W+YL +DEAHRLKNK C+L   LR++ FDHLLLLTGTPLQNNT+ELW+LLNF++P +F +L  FL E+G+LKE+SQVE L  IL+P+LLRRMKE VEKSIAPKEETIVEVELT  QKKYYRAI+E+NF  L  G KS+  PSL+N+MM+LRKCCNHP+L K
Sbjct:  626 FNVLITTYEMAITDRTHLSRIPWKYLVIDEAHRLKNKSCKLTIELRSYSFDHLLLLTGTPLQNNTQELWSLLNFLDPKQFSNLDQFLLEYGDLKESSQVESLQAILKPYLLRRMKERVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKGGKSNQGPSLLNIMMELRKCCNHPYLTK 808
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: A0A7D9M7J2_PARCT (Chromodomain-helicase-DNA-binding 8-like isoform X1 (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M7J2_PARCT)

HSP 1 Score: 235 bits (599), Expect = 1.970e-75
Identity = 117/183 (63.93%), Postives = 148/183 (80.87%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKS-SNLPSLMNVMMQLRKCCNHPFLL 546
            FNVLITTYE+ ++D+ LLS + WR + +DEAHRLKN++C+L+  L   + +H +LLTGTPLQNN +EL++LLNF+EP +F S   FL EFG L+  +QVE+L  +LRP +LRRMKEDVEKS+APKEETIVEVELT  QKK+YRAI ERNF  L+ GA S SN+P+LMN MM+LRKCCNHPFL+
Sbjct:   10 FNVLITTYEILIADNILLSSVPWRAVVIDEAHRLKNRNCKLLEGLNNLQMEHRILLTGTPLQNNVDELFSLLNFLEPAQFPSQGAFLMEFGNLRTEAQVERLQALLRPMMLRRMKEDVEKSLAPKEETIVEVELTTVQKKFYRAILERNFSFLNKGAVSTSNVPNLMNTMMELRKCCNHPFLI 192
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: A0A8J4Q812_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4Q812_9MYCE)

HSP 1 Score: 254 bits (648), Expect = 7.350e-75
Identity = 128/183 (69.95%), Postives = 149/183 (81.42%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKSSNLPSLMNVMMQLRKCCNHPFLLK 549
            FNVLITTYEM +SD   LS I W+YL +DEAHRLKNK CRL   LR++++DHLLLLTGTPLQNNT+ELW+LLNFMEP +F SL  FLE FG+L    QV  L  +L+P+LLRRMKE+VEKSIAPKEETIVEVELT  QKKYYRAI+ERNF  L  G KS   PSL+N+MM+LRKCCNHP+L+K
Sbjct:  616 FNVLITTYEMAISDRTQLSKINWKYLVIDEAHRLKNKSCRLTNELRSYKYDHLLLLTGTPLQNNTQELWSLLNFMEPEKFASLDSFLENFGDLT-VDQVSNLQALLKPYLLRRMKENVEKSIAPKEETIVEVELTTIQKKYYRAIYERNFSFLRKGGKSQG-PSLLNIMMELRKCCNHPYLIK 796
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: F4Q8E2_CAVFA (Myb domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4Q8E2_CAVFA)

HSP 1 Score: 252 bits (643), Expect = 3.440e-74
Identity = 122/183 (66.67%), Postives = 150/183 (81.97%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKSSNLPSLMNVMMQLRKCCNHPFLLK 549
            FN LITTYEM +SD + LS I W+Y+ +DEAHRLKNK CRL   LRT+ + HLLLLTGTP+QNNT+ELW+LLNF++P +F S  +FL EFG+LK+A QV KL  +L+P++LRRMKE+VEKSIAPKEETIVEVELT  QKKYYRAI+E+NF  L  G K    PSL+N+MM+LRKCCNHP+L+K
Sbjct:  572 FNTLITTYEMIISDRSFLSKINWKYVVIDEAHRLKNKSCRLTNELRTYNYGHLLLLTGTPIQNNTQELWSLLNFLQPEKFASCDEFLVEFGDLKQAEQVTKLQAVLKPYILRRMKENVEKSIAPKEETIVEVELTTVQKKYYRAIYEKNFSFLRKGGKG---PSLLNIMMELRKCCNHPYLIK 751
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BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Match: A0A151Z851_9MYCE (Myb domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z851_9MYCE)

HSP 1 Score: 247 bits (631), Expect = 1.400e-72
Identity = 123/183 (67.21%), Postives = 148/183 (80.87%), Query Frame = 1 
Query:    1 FNVLITTYEMTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGTPLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPFLLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKSSNLPSLMNVMMQLRKCCNHPFLLK 549
            FNVLITTYEM LSD   LS I+WRYL +DEAHRLKN+ C+L   L+T+ FDHLLLLTGTPLQNN +ELW LLNF +   F SL DF++++G L++A QV KL  IL+P+LLRRMKE+VEKSIAPKEETIVEVELT  QKKYYRAI+E+NF  L  G +    PSL+N+MM+LRKCCNHP+L+K
Sbjct:  495 FNVLITTYEMALSDRHYLSKIKWRYLVIDEAHRLKNQACKLTNQLKTYSFDHLLLLTGTPLQNNIQELWALLNFADAKVFNSLSDFMQDYGNLQDAEQVTKLQLILKPYLLRRMKENVEKSIAPKEETIVEVELTTIQKKYYRAIYEKNFTFLKKGCRGQG-PSLLNIMMELRKCCNHPYLIK 676
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90730.21028.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4I4V0_9EUKA8.600e-9779.23Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
A0A7S4I499_9EUKA2.370e-9577.05Hypothetical protein (Fragment) n=1 Tax=Vannella s... [more]
D3BJ98_POLPP7.810e-8072.68Myb domain-containing protein n=1 Tax=Polysphondyl... [more]
UPI000644B8925.870e-7869.95hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F0ZFE1_DICPU3.800e-7768.85Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
Q54UZ8_DICDI1.790e-7669.40CHD gene family protein containing chromodomain, h... [more]
A0A7D9M7J2_PARCT1.970e-7563.93Chromodomain-helicase-DNA-binding 8-like isoform X... [more]
A0A8J4Q812_9MYCE7.350e-7569.95Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
F4Q8E2_CAVFA3.440e-7466.67Myb domain-containing protein n=1 Tax=Cavenderia f... [more]
A0A151Z851_9MYCE1.400e-7267.21Myb domain-containing protein n=1 Tax=Tieghemostel... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90730contigM-pyrifera_M_contig90730:119..667 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score246.5
Seed ortholog evalue9.1e-63
Seed eggNOG ortholog5786.XP_003286132.1
Preferred nameCHD6
KEGG koko:K04494,ko:K14436,ko:K14437,ko:K14438
KEGG Pathwayko04310,map04310
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000122,GO:0000166,GO:0000902,GO:0000904,GO:0000976,GO:0000977,GO:0000978,GO:0000987,GO:0001012,GO:0001067,GO:0001221,GO:0001501,GO:0001568,GO:0001654,GO:0001667,GO:0001701,GO:0001775,GO:0001944,GO:0001964,GO:0001974,GO:0002009,GO:0002039,GO:0002064,GO:0002065,GO:0002066,GO:0002165,GO:0002376,GO:0002520,GO:0002521,GO:0002791,GO:0003002,GO:0003006,GO:0003007,GO:0003008,GO:0003013,GO:0003205,GO:0003206,GO:0003208,GO:0003215,GO:0003221,GO:0003222,GO:0003223,GO:0003226,GO:0003229,GO:0003231,GO:0003279,GO:0003674,GO:0003676,GO:0003677,GO:0003678,GO:0003682,GO:0003690,GO:0003824,GO:0004386,GO:0005488,GO:0005515,GO:0005524,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0006325,GO:0006338,GO:0006355,GO:0006357,GO:0006359,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0006959,GO:0006979,GO:0006996,GO:0007154,GO:0007165,GO:0007166,GO:0007267,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007297,GO:0007298,GO:0007350,GO:0007379,GO:0007389,GO:0007399,GO:0007409,GO:0007411,GO:0007417,GO:0007420,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007507,GO:0007512,GO:0007517,GO:0007548,GO:0007552,GO:0007560,GO:0007568,GO:0007600,GO:0007605,GO:0007610,GO:0007611,GO:0007613,GO:0007614,GO:0007616,GO:0007626,GO:0007628,GO:0007635,GO:0008013,GO:0008015,GO:0008094,GO:0008134,GO:0008144,GO:0008150,GO:0008285,GO:0008340,GO:0008344,GO:0008582,GO:0009605,GO:0009607,GO:0009617,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009880,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009968,GO:0009987,GO:0010259,GO:0010468,GO:0010522,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010631,GO:0010646,GO:0010648,GO:0010817,GO:0010880,GO:0010941,GO:0010959,GO:0014706,GO:0016043,GO:0016055,GO:0016322,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017076,GO:0017111,GO:0019216,GO:0019219,GO:0019222,GO:0019730,GO:0019904,GO:0019953,GO:0021537,GO:0021545,GO:0021553,GO:0021675,GO:0021700,GO:0021772,GO:0021988,GO:0022008,GO:0022412,GO:0022414,GO:0023051,GO:0023052,GO:0023057,GO:0030030,GO:0030097,GO:0030098,GO:0030111,GO:0030154,GO:0030178,GO:0030182,GO:0030217,GO:0030326,GO:0030534,GO:0030540,GO:0030554,GO:0030707,GO:0030855,GO:0030900,GO:0030901,GO:0031175,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031974,GO:0031981,GO:0032101,GO:0032102,GO:0032392,GO:0032501,GO:0032502,GO:0032504,GO:0032508,GO:0032553,GO:0032555,GO:0032559,GO:0032879,GO:0032989,GO:0032990,GO:0032991,GO:0033554,GO:0034599,GO:0034708,GO:0034762,GO:0034765,GO:0035064,GO:0035097,GO:0035107,GO:0035108,GO:0035113,GO:0035114,GO:0035116,GO:0035120,GO:0035137,GO:0035176,GO:0035220,GO:0035239,GO:0035282,GO:0035295,GO:0035639,GO:0035904,GO:0035909,GO:0036003,GO:0036091,GO:0036094,GO:0036302,GO:0040008,GO:0040011,GO:0040014,GO:0040018,GO:0042048,GO:0042110,GO:0042127,GO:0042221,GO:0042330,GO:0042393,GO:0042471,GO:0042472,GO:0042551,GO:0042623,GO:0042981,GO:0043009,GO:0043010,GO:0043044,GO:0043066,GO:0043067,GO:0043069,GO:0043167,GO:0043168,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043269,GO:0043565,GO:0043583,GO:0043584,GO:0043618,GO:0043619,GO:0043620,GO:0044087,GO:0044212,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044665,GO:0044703,GO:0045321,GO:0045595,GO:0045892,GO:0045893,GO:0045927,GO:0045934,GO:0045935,GO:0045944,GO:0045945,GO:0046620,GO:0046622,GO:0046649,GO:0046660,GO:0046883,GO:0048468,GO:0048469,GO:0048477,GO:0048483,GO:0048484,GO:0048513,GO:0048514,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048562,GO:0048563,GO:0048565,GO:0048568,GO:0048569,GO:0048583,GO:0048585,GO:0048598,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048644,GO:0048666,GO:0048667,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048738,GO:0048752,GO:0048771,GO:0048806,GO:0048812,GO:0048839,GO:0048844,GO:0048856,GO:0048858,GO:0048869,GO:0048870,GO:0050767,GO:0050789,GO:0050793,GO:0050794,GO:0050803,GO:0050807,GO:0050877,GO:0050890,GO:0050896,GO:0050905,GO:0050954,GO:0051046,GO:0051049,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051279,GO:0051282,GO:0051674,GO:0051703,GO:0051704,GO:0051705,GO:0051707,GO:0051716,GO:0051924,GO:0051960,GO:0051963,GO:0055008,GO:0055010,GO:0055123,GO:0060021,GO:0060041,GO:0060070,GO:0060123,GO:0060134,GO:0060173,GO:0060255,GO:0060284,GO:0060322,GO:0060324,GO:0060341,GO:0060384,GO:0060411,GO:0060415,GO:0060429,GO:0060537,GO:0060541,GO:0060548,GO:0060562,GO:0060828,GO:0060840,GO:0060872,GO:0061061,GO:0061383,GO:0061384,GO:0061458,GO:0061564,GO:0062009,GO:0065007,GO:0065008,GO:0070013,GO:0070016,GO:0070887,GO:0071103,GO:0071339,GO:0071695,GO:0071840,GO:0072358,GO:0072359,GO:0080090,GO:0090087,GO:0090090,GO:0090130,GO:0090132,GO:0090276,GO:0090596,GO:0090659,GO:0097159,GO:0097367,GO:0097485,GO:0120036,GO:0120039,GO:0140030,GO:0140034,GO:0140097,GO:0198738,GO:1901265,GO:1901363,GO:1901522,GO:1902494,GO:1902679,GO:1902680,GO:1902683,GO:1902685,GO:1903169,GO:1903506,GO:1903507,GO:1903508,GO:1903530,GO:1904062,GO:1904396,GO:1905114,GO:1990234,GO:1990837,GO:1990841,GO:2000026,GO:2000112,GO:2000113,GO:2000177,GO:2000178,GO:2000269,GO:2000270,GO:2001141
EggNOG free text desc.Chromo (CHRromatin Organisation MOdifier) domain
EggNOG OGs3X87R@554915,COG0553@1,KOG0384@2759
EC3.6.4.12
COG Functional cat.B
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons1
Model size549
Cds size522
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816819.225304-CDS-M-pyrifera_M_contig90730:118..6401622816819.225304-CDS-M-pyrifera_M_contig90730:118..640Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90730 119..640 -
1692278196.98617-CDS-M-pyrifera_M_contig90730:118..6401692278196.98617-CDS-M-pyrifera_M_contig90730:118..640Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90730 119..640 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816819.2405925-UTR-M-pyrifera_M_contig90730:640..6671622816819.2405925-UTR-M-pyrifera_M_contig90730:640..667Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90730 641..667 -
1692278196.9999404-UTR-M-pyrifera_M_contig90730:640..6671692278196.9999404-UTR-M-pyrifera_M_contig90730:640..667Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90730 641..667 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90730.21028.1prot_M-pyrifera_M_contig90730.21028.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90730 119..640 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90730.21028.1

>prot_M-pyrifera_M_contig90730.21028.1 ID=prot_M-pyrifera_M_contig90730.21028.1|Name=mRNA_M-pyrifera_M_contig90730.21028.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
MTLSDSALLSGIRWRYLAVDEAHRLKNKDCRLITTLRTFRFDHLLLLTGT
PLQNNTEELWTLLNFMEPPEFESLPDFLEEFGELKEASQVEKLHEILRPF
LLRRMKEDVEKSIAPKEETIVEVELTATQKKYYRAIFERNFQSLDMGAKS
SNLPSLMNVMMQLRKCCNHPFLLK
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mRNA from alignment at M-pyrifera_M_contig90730:119..667-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90730.21028.1 ID=mRNA_M-pyrifera_M_contig90730.21028.1|Name=mRNA_M-pyrifera_M_contig90730.21028.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=549bp|location=Sequence derived from alignment at M-pyrifera_M_contig90730:119..667- (Macrocystis pyrifera P11B4 male)
TTCAACGTCCTCATTACCACCTATGAGATGACACTGAGCGACTCTGCGCT
CCTCTCTGGCATCCGTTGGAGATACCTCGCTGTCGACGAGGCTCACCGCC
TCAAGAACAAGGACTGTCGCCTCATCACCACGCTGCGGACCTTCCGCTTC
GACCATCTGCTCCTCCTCACCGGCACTCCGCTGCAGAACAACACCGAAGA
GCTGTGGACTCTGCTGAACTTCATGGAGCCGCCCGAGTTTGAATCTCTCC
CTGATTTCCTGGAGGAGTTCGGAGAACTGAAGGAGGCGTCGCAGGTGGAG
AAACTGCATGAGATCCTCAGGCCCTTCCTCCTCCGCAGGATGAAGGAGGA
CGTGGAGAAGAGCATTGCGCCCAAGGAGGAGACCATCGTCGAGGTGGAGC
TCACTGCCACGCAGAAGAAGTACTATCGTGCCATCTTCGAGAGGAACTTC
CAGTCGCTCGACATGGGGGCCAAGTCTTCGAACCTCCCCTCGCTCATGAA
CGTCATGATGCAGCTGAGGAAGTGCTGCAACCATCCGTTCCTGCTCAAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90730:119..667-

>mRNA_M-pyrifera_M_contig90730.21028.1 ID=mRNA_M-pyrifera_M_contig90730.21028.1|Name=mRNA_M-pyrifera_M_contig90730.21028.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1044bp|location=Sequence derived from alignment at M-pyrifera_M_contig90730:119..667- (Macrocystis pyrifera P11B4 male)
ATGACACTGAGCGACTCTGCGCTCCTCTCTGGCATCCGTTGGAGATACCT
CGCTGTCGACGAGGCTCACCGCCTCAAGAACAAGGACTGTCGCCTCATCA
CCACGCTGCGGACCTTCCGCTTCGACCATCTGCTCCTCCTCACCGGCACT
CCGCTGCAGAACAACACCGAAGAGCTGTGGACTCTGCTGAACTTCATGGA
GCCGCCCGAGTTTGAATCTCTCCCTGATTTCCTGGAGGAGTTCGGAGAAC
TGAAGGAGGCGTCGCAGGTGGAGAAACTGCATGAGATCCTCAGGCCCTTC
CTCCTCCGCAGGATGAAGGAGGACGTGGAGAAGAGCATTGCGCCCAAGGA
GGAGACCATCGTCGAGGTGGAGCTCACTGCCACGCAGAAGAAGTACTATC
GTGCCATCTTCGAGAGGAACTTCCAGTCGCTCGACATGGGGGCCAAGTCT
TCGAACCTCCCCTCGCTCATGAACGTCATGATGCAGCTGAGGAAGTGCTG
CAACCATCCGTTCCTGCTCAAGATGACACTGAGCGACTCTGCGCTCCTCT
CTGGCATCCGTTGGAGATACCTCGCTGTCGACGAGGCTCACCGCCTCAAG
AACAAGGACTGTCGCCTCATCACCACGCTGCGGACCTTCCGCTTCGACCA
TCTGCTCCTCCTCACCGGCACTCCGCTGCAGAACAACACCGAAGAGCTGT
GGACTCTGCTGAACTTCATGGAGCCGCCCGAGTTTGAATCTCTCCCTGAT
TTCCTGGAGGAGTTCGGAGAACTGAAGGAGGCGTCGCAGGTGGAGAAACT
GCATGAGATCCTCAGGCCCTTCCTCCTCCGCAGGATGAAGGAGGACGTGG
AGAAGAGCATTGCGCCCAAGGAGGAGACCATCGTCGAGGTGGAGCTCACT
GCCACGCAGAAGAAGTACTATCGTGCCATCTTCGAGAGGAACTTCCAGTC
GCTCGACATGGGGGCCAAGTCTTCGAACCTCCCCTCGCTCATGAACGTCA
TGATGCAGCTGAGGAAGTGCTGCAACCATCCGTTCCTGCTCAAG
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