mRNA_M-pyrifera_M_contig90650.21016.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A1Y1HLJ7_KLENI (ARM repeat superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HLJ7_KLENI) HSP 1 Score: 88.2 bits (217), Expect = 2.210e-16 Identity = 55/187 (29.41%), Postives = 92/187 (49.20%), Query Frame = 1 Query: 139 LPSSKEGVFASISTSVEILIGSSLTEEVKREALSNMEGDCARALMAFIARLTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELA--QDTESPHNSAAELALAAAINGLGVEEFLTVLPLNFGLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPV 693 L S +E + + + S+ LI + + + R+ L+ + + L +LGYQY+ AW L++ + +Y+ LGP Q + T+ EL +D P A+ AAI +G E+ L++LPLN D WLLP+L+ H+ ++L F +LPL + ++ A EGRP+ Sbjct: 342 LASEREELIFTTAESLRALINGCIDDAMIRQGLAEGRTGPSEIERVCVC-LEGTLGYQYRGAWDMALLVVAEMYQKLGPASYQLMYKTTQTLGELQALEDENMPCRPQLHAAIGAAIEAMGPEQLLSILPLNLD-GPDLSKANLWLLPILEKHIVGARLHWFADQVLPLVGTLSQRAAKATAEGRPI 526
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A8J5K0K3_HOMAM (RRP12-like protein-like n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5K0K3_HOMAM) HSP 1 Score: 82.8 bits (203), Expect = 1.570e-14 Identity = 54/193 (27.98%), Postives = 91/193 (47.15%), Query Frame = 1 Query: 106 LGKWSTLLLDYLPSSKEGVFASISTSVEILIGSSLTEEVKREALSNMEGDCARALMAFIARLTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNFGLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQ-------IKEQG 663 + W L+ Y S + V + S E LI +E L++ +G A A + L +Q+Q AWG V S + +GP F + L ++EL ++ PH + E A+ AA+ LG + + V+PL V ++ +R W+LP+LK +V ++L F + + LA + +KE+G Sbjct: 417 IASWFEQLVPYWQSDHDEVQTKVFESFEALI-QECVGNCSKEYLASDQGQIA----AIFRVVEGGLSFQFQSAWGHVFKCISVCFTVIGPNFPAMMEPCLKNLTELMENPHLPHRAYLEQAIGAAVRALGPKSLMAVVPLQVTGNVTEDEKRFWVLPILKKYVKNTQLCYFEDYFVHLAGKCFVLLDSLKEKG 604
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: UPI0018861146 (RRP12-like protein isoform X1 n=2 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018861146) HSP 1 Score: 77.0 bits (188), Expect = 1.480e-12 Identity = 40/135 (29.63%), Postives = 74/135 (54.81%), Query Frame = 1 Query: 295 KSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 696 + L Y++ +W FVL + C Y+ G + +L ++++L P++ +LA+ A+ +G E L V+PLN G D E R WL+PV++ HV ++L F + LPLA+ +K++ ++ G+ ++ Sbjct: 479 EGLSYRFHASWPFVLQILGCFYKVAGKEAHPVMTKSLQSLADLRAIPRFPYSGELDLAVGGAVQSMGPETVLGVVPLNITGYDDDLEFPRSWLVPVIRDHVKNTRLGFFTSYFLPLASTLKQRSEELEQAGQKLE 613
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A667YJR2_9TELE (Ribosomal RNA processing 12 homolog n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YJR2_9TELE) HSP 1 Score: 76.6 bits (187), Expect = 1.990e-12 Identity = 41/137 (29.93%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 289 LTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 696 + + L Y++ +W FVL + C YR G + +L ++++L P + +LA+ A+ +G E L V+PLN G D E R WL+PV++ HV + L+ F + LPLA+ +K++ ++ G+ ++ Sbjct: 482 IEEGLSYRFHTSWPFVLQILGCFYRVAGRWAHPIMTKSLQSLADLRSTPRFPFSGELDLAVGGAVESMGPEIVLGVVPLNITGYEDDLEFPRSWLVPVIRDHVKNTHLAFFTSYFLPLASTLKQRADQLEQTGQKLE 618
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A667YFJ0_9TELE (Ribosomal RNA processing 12 homolog n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YFJ0_9TELE) HSP 1 Score: 76.6 bits (187), Expect = 2.000e-12 Identity = 41/137 (29.93%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 289 LTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 696 + + L Y++ +W FVL + C YR G + +L ++++L P + +LA+ A+ +G E L V+PLN G D E R WL+PV++ HV + L+ F + LPLA+ +K++ ++ G+ ++ Sbjct: 480 IEEGLSYRFHTSWPFVLQILGCFYRVAGRWAHPIMTKSLQSLADLRSTPRFPFSGELDLAVGGAVESMGPEIVLGVVPLNITGYEDDLEFPRSWLVPVIRDHVKNTHLAFFTSYFLPLASTLKQRADQLEQTGQKLE 616
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A667Y8Y1_9TELE (Ribosomal RNA processing 12 homolog n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667Y8Y1_9TELE) HSP 1 Score: 76.6 bits (187), Expect = 2.000e-12 Identity = 41/137 (29.93%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 289 LTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 696 + + L Y++ +W FVL + C YR G + +L ++++L P + +LA+ A+ +G E L V+PLN G D E R WL+PV++ HV + L+ F + LPLA+ +K++ ++ G+ ++ Sbjct: 480 IEEGLSYRFHTSWPFVLQILGCFYRVAGRWAHPIMTKSLQSLADLRSTPRFPFSGELDLAVGGAVESMGPEIVLGVVPLNITGYEDDLEFPRSWLVPVIRDHVKNTHLAFFTSYFLPLASTLKQRADQLEQTGQKLE 616
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A667YRX0_9TELE (Ribosomal RNA processing 12 homolog n=4 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YRX0_9TELE) HSP 1 Score: 76.6 bits (187), Expect = 2.000e-12 Identity = 41/137 (29.93%), Postives = 74/137 (54.01%), Query Frame = 1 Query: 289 LTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 696 + + L Y++ +W FVL + C YR G + +L ++++L P + +LA+ A+ +G E L V+PLN G D E R WL+PV++ HV + L+ F + LPLA+ +K++ ++ G+ ++ Sbjct: 478 IEEGLSYRFHTSWPFVLQILGCFYRVAGRWAHPIMTKSLQSLADLRSTPRFPFSGELDLAVGGAVESMGPEIVLGVVPLNITGYEDDLEFPRSWLVPVIRDHVKNTHLAFFTSYFLPLASTLKQRADQLEQTGQKLE 614
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A3Q2YCS6_HIPCM (Ribosomal RNA processing 12 homolog n=2 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2YCS6_HIPCM) HSP 1 Score: 75.9 bits (185), Expect = 3.650e-12 Identity = 40/135 (29.63%), Postives = 72/135 (53.33%), Query Frame = 1 Query: 295 KSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 696 + L Y++ +W FVL + C Y+ G + +L ++++L P++ +LA+ A+ +G E L V+PLN G D E R WL+PV++ HV + L F + LPLA +K++ ++ G+ ++ Sbjct: 477 EGLSYRFHASWPFVLQILGCFYKVAGKHAHPVMTKSLQSLADLRATPRFPYSGELDLAVGGAVQSMGPEVVLGVVPLNITGYDDDLEFPRSWLVPVIRDHVRNTHLGFFTSYFLPLATTLKQRAEELEQAGQKLE 611
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A0L0S007_ALLM3 (NUC173 domain-containing protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S007_ALLM3) HSP 1 Score: 68.6 bits (166), Expect = 1.130e-9 Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = 1 Query: 127 LLDYLPSSKEGVFASISTSVEILIGSSLTEEVKREALSNME--GDCARA-------LMAFIARLTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNFGLAVDDENR-REWLLPVLKAHVCRSKLSTFGQHLLPLANQI 651 L +L +S G + V LI + + + ++AL+ +E G A L +A L +Y+ AW VL + + L R L + G L + + + E PH + + L AI +G ++FL+VLPLN LA + R +LLP++ V R++L+ F Q+ +PLA + Sbjct: 309 LFPFLQASAAGPRNVTANMVAELIADCIPDVMVQQALATVEVHGGVPAAQREVRADLEQIVATTELGLSVRYKSAWPQVLRIMAALVRRLRGDAAVLMRGTLELLGDFRDEPEFPHKAELDDVLCTAIEYMGPQKFLSVLPLNIELAGKPGVKVRTYLLPLMVESVQRTELAYFSQYFIPLATHL 493
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: R7Z1S5_CONA1 (NUC173 domain-containing protein n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7Z1S5_CONA1) HSP 1 Score: 65.9 bits (159), Expect = 9.200e-9 Identity = 56/229 (24.45%), Postives = 99/229 (43.23%), Query Frame = 1 Query: 1 QPSPQDQEQVIAYGPCVAAAVNAAKKASPAATVAALGKWSTLLLDYLPSSKEGVFASISTSVEILIGSSLTEEVKREALSNMEGDCARALMAFIARLTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNFGLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLAN----QIKEQGLAAK 675 QPS D + + + ++ + + + P T L T++ ++L S + S S + + + + V E E + L +T L +YQ AW V + ++ AL ++GA+ V +L + A+ LA AI +G + L +LPLN V + R WLLP+++ V ++L+ F L+PL+ ++ E G A K Sbjct: 297 QPSQNDSQLLPPWIAVLSRGYDVSAQVEPEETFQKLPDLFTMISNFLASPSHNIRESASECLISFLSNCIPNSVLLEPSIYDE----KVLEKLAKIVTDLLSVKYQSAWMEVFAVLGAMFDALRWRSAPLLSGAVKVVGDLRANESFTGKKEADAVLAKAIQAMGPDNVLEILPLNLLKPVPGQPGRVWLLPLMRDSVSNTRLAHFRSELVPLSETMFQKVLEHGNAEK 521 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90650.21016.1 >prot_M-pyrifera_M_contig90650.21016.1 ID=prot_M-pyrifera_M_contig90650.21016.1|Name=mRNA_M-pyrifera_M_contig90650.21016.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp QPSPQDQEQVIAYGPCVAAAVNAAKKASPAATVAALGKWSTLLLDYLPSSback to top mRNA from alignment at M-pyrifera_M_contig90650:3..698- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90650.21016.1 ID=mRNA_M-pyrifera_M_contig90650.21016.1|Name=mRNA_M-pyrifera_M_contig90650.21016.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=696bp|location=Sequence derived from alignment at M-pyrifera_M_contig90650:3..698- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90650:3..698- >mRNA_M-pyrifera_M_contig90650.21016.1 ID=mRNA_M-pyrifera_M_contig90650.21016.1|Name=mRNA_M-pyrifera_M_contig90650.21016.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1392bp|location=Sequence derived from alignment at M-pyrifera_M_contig90650:3..698- (Macrocystis pyrifera P11B4 male)back to top |