prot_M-pyrifera_M_contig90650.21016.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90650.21016.1
Unique Nameprot_M-pyrifera_M_contig90650.21016.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length232
Homology
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A1Y1HLJ7_KLENI (ARM repeat superfamily protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HLJ7_KLENI)

HSP 1 Score: 88.2 bits (217), Expect = 2.210e-16
Identity = 55/187 (29.41%), Postives = 92/187 (49.20%), Query Frame = 0
Query:   47 LPSSKEGVFASISTSVEILIGSSLTEEVKREALSNMEGDCARALMAFIARLTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELA--QDTESPHNSAAELALAAAINGLGVEEFLTVLPLNFGLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPV 231
            L S +E +  + + S+  LI   + + + R+ L+      +      +  L  +LGYQY+ AW   L++ + +Y+ LGP   Q +     T+ EL   +D   P       A+ AAI  +G E+ L++LPLN     D      WLLP+L+ H+  ++L  F   +LPL   + ++   A  EGRP+
Sbjct:  342 LASEREELIFTTAESLRALINGCIDDAMIRQGLAEGRTGPSEIERVCVC-LEGTLGYQYRGAWDMALLVVAEMYQKLGPASYQLMYKTTQTLGELQALEDENMPCRPQLHAAIGAAIEAMGPEQLLSILPLNLD-GPDLSKANLWLLPILEKHIVGARLHWFADQVLPLVGTLSQRAAKATAEGRPI 526          
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A8J5K0K3_HOMAM (RRP12-like protein-like n=1 Tax=Homarus americanus TaxID=6706 RepID=A0A8J5K0K3_HOMAM)

HSP 1 Score: 82.8 bits (203), Expect = 1.570e-14
Identity = 54/193 (27.98%), Postives = 91/193 (47.15%), Query Frame = 0
Query:   36 LGKWSTLLLDYLPSSKEGVFASISTSVEILIGSSLTEEVKREALSNMEGDCARALMAFIARLTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNFGLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQ-------IKEQG 221
            +  W   L+ Y  S  + V   +  S E LI         +E L++ +G  A    A    +   L +Q+Q AWG V    S  +  +GP F   +   L  ++EL ++   PH +  E A+ AA+  LG +  + V+PL     V ++ +R W+LP+LK +V  ++L  F  + + LA +       +KE+G
Sbjct:  417 IASWFEQLVPYWQSDHDEVQTKVFESFEALI-QECVGNCSKEYLASDQGQIA----AIFRVVEGGLSFQFQSAWGHVFKCISVCFTVIGPNFPAMMEPCLKNLTELMENPHLPHRAYLEQAIGAAVRALGPKSLMAVVPLQVTGNVTEDEKRFWVLPILKKYVKNTQLCYFEDYFVHLAGKCFVLLDSLKEKG 604          
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: UPI0018861146 (RRP12-like protein isoform X1 n=2 Tax=Syngnathus acus TaxID=161584 RepID=UPI0018861146)

HSP 1 Score: 77.0 bits (188), Expect = 1.480e-12
Identity = 40/135 (29.63%), Postives = 74/135 (54.81%), Query Frame = 0
Query:   99 KSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 232
            + L Y++  +W FVL +  C Y+  G      +  +L ++++L      P++   +LA+  A+  +G E  L V+PLN  G   D E  R WL+PV++ HV  ++L  F  + LPLA+ +K++    ++ G+ ++
Sbjct:  479 EGLSYRFHASWPFVLQILGCFYKVAGKEAHPVMTKSLQSLADLRAIPRFPYSGELDLAVGGAVQSMGPETVLGVVPLNITGYDDDLEFPRSWLVPVIRDHVKNTRLGFFTSYFLPLASTLKQRSEELEQAGQKLE 613          
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A667YJR2_9TELE (Ribosomal RNA processing 12 homolog n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YJR2_9TELE)

HSP 1 Score: 76.6 bits (187), Expect = 1.990e-12
Identity = 41/137 (29.93%), Postives = 74/137 (54.01%), Query Frame = 0
Query:   97 LTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 232
            + + L Y++  +W FVL +  C YR  G      +  +L ++++L      P +   +LA+  A+  +G E  L V+PLN  G   D E  R WL+PV++ HV  + L+ F  + LPLA+ +K++    ++ G+ ++
Sbjct:  482 IEEGLSYRFHTSWPFVLQILGCFYRVAGRWAHPIMTKSLQSLADLRSTPRFPFSGELDLAVGGAVESMGPEIVLGVVPLNITGYEDDLEFPRSWLVPVIRDHVKNTHLAFFTSYFLPLASTLKQRADQLEQTGQKLE 618          
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A667YFJ0_9TELE (Ribosomal RNA processing 12 homolog n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YFJ0_9TELE)

HSP 1 Score: 76.6 bits (187), Expect = 2.000e-12
Identity = 41/137 (29.93%), Postives = 74/137 (54.01%), Query Frame = 0
Query:   97 LTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 232
            + + L Y++  +W FVL +  C YR  G      +  +L ++++L      P +   +LA+  A+  +G E  L V+PLN  G   D E  R WL+PV++ HV  + L+ F  + LPLA+ +K++    ++ G+ ++
Sbjct:  480 IEEGLSYRFHTSWPFVLQILGCFYRVAGRWAHPIMTKSLQSLADLRSTPRFPFSGELDLAVGGAVESMGPEIVLGVVPLNITGYEDDLEFPRSWLVPVIRDHVKNTHLAFFTSYFLPLASTLKQRADQLEQTGQKLE 616          
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A667Y8Y1_9TELE (Ribosomal RNA processing 12 homolog n=1 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667Y8Y1_9TELE)

HSP 1 Score: 76.6 bits (187), Expect = 2.000e-12
Identity = 41/137 (29.93%), Postives = 74/137 (54.01%), Query Frame = 0
Query:   97 LTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 232
            + + L Y++  +W FVL +  C YR  G      +  +L ++++L      P +   +LA+  A+  +G E  L V+PLN  G   D E  R WL+PV++ HV  + L+ F  + LPLA+ +K++    ++ G+ ++
Sbjct:  480 IEEGLSYRFHTSWPFVLQILGCFYRVAGRWAHPIMTKSLQSLADLRSTPRFPFSGELDLAVGGAVESMGPEIVLGVVPLNITGYEDDLEFPRSWLVPVIRDHVKNTHLAFFTSYFLPLASTLKQRADQLEQTGQKLE 616          
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A667YRX0_9TELE (Ribosomal RNA processing 12 homolog n=4 Tax=Myripristis murdjan TaxID=586833 RepID=A0A667YRX0_9TELE)

HSP 1 Score: 76.6 bits (187), Expect = 2.000e-12
Identity = 41/137 (29.93%), Postives = 74/137 (54.01%), Query Frame = 0
Query:   97 LTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 232
            + + L Y++  +W FVL +  C YR  G      +  +L ++++L      P +   +LA+  A+  +G E  L V+PLN  G   D E  R WL+PV++ HV  + L+ F  + LPLA+ +K++    ++ G+ ++
Sbjct:  478 IEEGLSYRFHTSWPFVLQILGCFYRVAGRWAHPIMTKSLQSLADLRSTPRFPFSGELDLAVGGAVESMGPEIVLGVVPLNITGYEDDLEFPRSWLVPVIRDHVKNTHLAFFTSYFLPLASTLKQRADQLEQTGQKLE 614          
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A3Q2YCS6_HIPCM (Ribosomal RNA processing 12 homolog n=2 Tax=Hippocampus comes TaxID=109280 RepID=A0A3Q2YCS6_HIPCM)

HSP 1 Score: 75.9 bits (185), Expect = 3.650e-12
Identity = 40/135 (29.63%), Postives = 72/135 (53.33%), Query Frame = 0
Query:   99 KSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNF-GLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ 232
            + L Y++  +W FVL +  C Y+  G      +  +L ++++L      P++   +LA+  A+  +G E  L V+PLN  G   D E  R WL+PV++ HV  + L  F  + LPLA  +K++    ++ G+ ++
Sbjct:  477 EGLSYRFHASWPFVLQILGCFYKVAGKHAHPVMTKSLQSLADLRATPRFPYSGELDLAVGGAVQSMGPEVVLGVVPLNITGYDDDLEFPRSWLVPVIRDHVRNTHLGFFTSYFLPLATTLKQRAEELEQAGQKLE 611          
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: A0A0L0S007_ALLM3 (NUC173 domain-containing protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S007_ALLM3)

HSP 1 Score: 68.6 bits (166), Expect = 1.130e-9
Identity = 53/185 (28.65%), Postives = 88/185 (47.57%), Query Frame = 0
Query:   43 LLDYLPSSKEGVFASISTSVEILIGSSLTEEVKREALSNME--GDCARA-------LMAFIARLTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNFGLAVDDENR-REWLLPVLKAHVCRSKLSTFGQHLLPLANQI 217
            L  +L +S  G     +  V  LI   + + + ++AL+ +E  G    A       L   +A     L  +Y+ AW  VL + + L R L       + G L  + +   + E PH +  +  L  AI  +G ++FL+VLPLN  LA     + R +LLP++   V R++L+ F Q+ +PLA  +
Sbjct:  309 LFPFLQASAAGPRNVTANMVAELIADCIPDVMVQQALATVEVHGGVPAAQREVRADLEQIVATTELGLSVRYKSAWPQVLRIMAALVRRLRGDAAVLMRGTLELLGDFRDEPEFPHKAELDDVLCTAIEYMGPQKFLSVLPLNIELAGKPGVKVRTYLLPLMVESVQRTELAYFSQYFIPLATHL 493          
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Match: R7Z1S5_CONA1 (NUC173 domain-containing protein n=1 Tax=Coniosporium apollinis (strain CBS 100218) TaxID=1168221 RepID=R7Z1S5_CONA1)

HSP 1 Score: 65.9 bits (159), Expect = 9.200e-9
Identity = 56/229 (24.45%), Postives = 99/229 (43.23%), Query Frame = 0
Query:    1 QPSPQDQEQVIAYGPCVAAAVNAAKKASPAATVAALGKWSTLLLDYLPSSKEGVFASISTSVEILIGSSLTEEVKREALSNMEGDCARALMAFIARLTKSLGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHNSAAELALAAAINGLGVEEFLTVLPLNFGLAVDDENRREWLLPVLKAHVCRSKLSTFGQHLLPLAN----QIKEQGLAAK 225
            QPS  D + +  +   ++   + + +  P  T   L    T++ ++L S    +  S S  +   + + +   V  E     E    + L      +T  L  +YQ AW  V  +   ++ AL       ++GA+  V +L  +        A+  LA AI  +G +  L +LPLN    V  +  R WLLP+++  V  ++L+ F   L+PL+     ++ E G A K
Sbjct:  297 QPSQNDSQLLPPWIAVLSRGYDVSAQVEPEETFQKLPDLFTMISNFLASPSHNIRESASECLISFLSNCIPNSVLLEPSIYDE----KVLEKLAKIVTDLLSVKYQSAWMEVFAVLGAMFDALRWRSAPLLSGAVKVVGDLRANESFTGKKEADAVLAKAIQAMGPDNVLEILPLNLLKPVPGQPGRVWLLPLMRDSVSNTRLAHFRSELVPLSETMFQKVLEHGNAEK 521          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90650.21016.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y1HLJ7_KLENI2.210e-1629.41ARM repeat superfamily protein n=1 Tax=Klebsormidi... [more]
A0A8J5K0K3_HOMAM1.570e-1427.98RRP12-like protein-like n=1 Tax=Homarus americanus... [more]
UPI00188611461.480e-1229.63RRP12-like protein isoform X1 n=2 Tax=Syngnathus a... [more]
A0A667YJR2_9TELE1.990e-1229.93Ribosomal RNA processing 12 homolog n=1 Tax=Myripr... [more]
A0A667YFJ0_9TELE2.000e-1229.93Ribosomal RNA processing 12 homolog n=1 Tax=Myripr... [more]
A0A667Y8Y1_9TELE2.000e-1229.93Ribosomal RNA processing 12 homolog n=1 Tax=Myripr... [more]
A0A667YRX0_9TELE2.000e-1229.93Ribosomal RNA processing 12 homolog n=4 Tax=Myripr... [more]
A0A3Q2YCS6_HIPCM3.650e-1229.63Ribosomal RNA processing 12 homolog n=2 Tax=Hippoc... [more]
A0A0L0S007_ALLM31.130e-928.65NUC173 domain-containing protein n=2 Tax=Allomyces... [more]
R7Z1S5_CONA19.200e-924.45NUC173 domain-containing protein n=1 Tax=Coniospor... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012978Uncharacterised domain NUC173PFAMPF08161NUC173coord: 95..231
e-value: 9.0E-29
score: 100.6
NoneNo IPR availablePANTHERPTHR21576:SF2RRP12-LIKE PROTEINcoord: 41..232
NoneNo IPR availablePANTHERPTHR21576UNCHARACTERIZED NODULIN-LIKE PROTEINcoord: 41..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90650contigM-pyrifera_M_contig90650:3..698 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90650.21016.1mRNA_M-pyrifera_M_contig90650.21016.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90650 3..698 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90650.21016.1 ID=prot_M-pyrifera_M_contig90650.21016.1|Name=mRNA_M-pyrifera_M_contig90650.21016.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=232bp
QPSPQDQEQVIAYGPCVAAAVNAAKKASPAATVAALGKWSTLLLDYLPSS
KEGVFASISTSVEILIGSSLTEEVKREALSNMEGDCARALMAFIARLTKS
LGYQYQEAWGFVLVLHSCLYRALGPGFGQWIAGALHTVSELAQDTESPHN
SAAELALAAAINGLGVEEFLTVLPLNFGLAVDDENRREWLLPVLKAHVCR
SKLSTFGQHLLPLANQIKEQGLAAKKEGRPVQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012978Uncharacterised_NUC173