mRNA_M-pyrifera_M_contig90511.20985.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90511.20985.1
Unique NamemRNA_M-pyrifera_M_contig90511.20985.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A517WMA2_9PLAN (2-aminoadipate transaminase n=7 Tax=Gimesia TaxID=1649453 RepID=A0A517WMA2_9PLAN)

HSP 1 Score: 526 bits (1354), Expect = 5.080e-186
Identity = 258/263 (98.10%), Postives = 261/263 (99.24%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF 789
            LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRV+SDHLYY+HVA LRNVYREKRDCMLEAADE+FSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFE AVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF
Sbjct:  148 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVMSDHLYYDHVAALRNVYREKRDCMLEAADEFFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFESAVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF 410          
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A518AFN2_9PLAN (2-aminoadipate transaminase n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518AFN2_9PLAN)

HSP 1 Score: 468 bits (1204), Expect = 3.310e-163
Identity = 228/263 (86.69%), Postives = 243/263 (92.40%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF 789
            LGARI+SVETDEFGMRMD+LESTL+MLESQG+LAKVKMIY+VSDYENPSGLSLSIDRRQQ+VEIARKWS+ QRI ILEDLAYRELCYDGPV PSIRSFDP+G+ VILTQTFSKSFSPGLRVGFGVA  E+CAAIRDKKGNDDFGSTNLSQHIL RVL D LYYEHV  LR VYREKRDCML+AAD  FSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLF+RAVH +KVMYVPGELFYA D G+ +EEQ A QKNHMRLTF
Sbjct:  148 LGARIISVETDEFGMRMDALESTLEMLESQGELAKVKMIYLVSDYENPSGLSLSIDRRQQVVEIARKWSQLQRILILEDLAYRELCYDGPVAPSIRSFDPTGETVILTQTFSKSFSPGLRVGFGVASPEICAAIRDKKGNDDFGSTNLSQHILARVLDDKLYYEHVEQLRGVYREKRDCMLDAADACFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFQRAVHEDKVMYVPGELFYAFDHGISVEEQPAIQKNHMRLTF 410          
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A518IL62_9PLAN (2-aminoadipate transaminase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IL62_9PLAN)

HSP 1 Score: 431 bits (1109), Expect = 9.030e-149
Identity = 207/263 (78.71%), Postives = 234/263 (88.97%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF 789
            LGARIVSVETDEFGMRMDSLE+TL ML+SQG L++VKMIY+VSDYENPSG+SL++DRR+Q+VEIAR WS+ QRIF+LEDLAYRELCYDGPV PSIRSFD +G+ VILTQTFSKSFSPGLRVGFGVAP EVCAAIRDKKGNDDFGSTN SQHIL   L ++LYY+HV  LR VYREKRDCML+AAD +FS+IP VHWVHP GGLYVWMTLP+ IETGF SPLF++A+H +KVMYVPGEL YAVD G   +EQ + QKNHMRLTF
Sbjct:  148 LGARIVSVETDEFGMRMDSLEATLAMLDSQGQLSRVKMIYLVSDYENPSGVSLALDRRKQVVEIARSWSREQRIFVLEDLAYRELCYDGPVVPSIRSFDTTGETVILTQTFSKSFSPGLRVGFGVAPDEVCAAIRDKKGNDDFGSTNFSQHILATALRENLYYDHVEYLRTVYREKRDCMLQAADLHFSNIPNVHWVHPRGGLYVWMTLPDGIETGFNSPLFQKAIHEDKVMYVPGELCYAVDTGRGEKEQPSIQKNHMRLTF 410          
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A517VP00_9PLAN (2-aminoadipate transaminase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VP00_9PLAN)

HSP 1 Score: 426 bits (1095), Expect = 1.210e-146
Identity = 206/263 (78.33%), Postives = 229/263 (87.07%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF 789
            LGARIVS+ETDEFGMRMDSLESTL +LESQG L +VKMIY+VSDYENPSG+SLS DRR Q+VEIA+ WSK Q+IFILEDLAYRELCYDGPV PSIRSFD +G+ VILTQTFSKSFSPGLRVGFGVAP EVCAAI DKKGNDDFGSTN+SQ +L   L ++ YYEHV  LR VYREKR+CMLEAAD YFS+IPGV WVHPNGGLYVWMTLP +IETGF SPLF++A+H +KVMYVPGEL YA DQ L  ++Q   QKNHMRLTF
Sbjct:  148 LGARIVSIETDEFGMRMDSLESTLGILESQGQLERVKMIYLVSDYENPSGISLSQDRRGQVVEIAQTWSKQQKIFILEDLAYRELCYDGPVVPSIRSFDSTGETVILTQTFSKSFSPGLRVGFGVAPKEVCAAICDKKGNDDFGSTNMSQQVLATALRENFYYEHVENLREVYREKRNCMLEAADTYFSNIPGVRWVHPNGGLYVWMTLPNNIETGFASPLFQKAIHEDKVMYVPGELCYATDQKLDFDKQPPIQKNHMRLTF 410          
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A2E2BXX4_9PLAN (Transcriptional regulator n=2 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BXX4_9PLAN)

HSP 1 Score: 415 bits (1067), Expect = 2.150e-142
Identity = 197/263 (74.90%), Postives = 228/263 (86.69%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF 789
            LGARI+SV+TDE GMRMDSL+STL+MLESQG L +VKMIY+VSDYENPSGLSLS++RR+Q++ +A+KWSK  RI ILEDLAYRELCYDGPV PSIRSFD +G+ VILTQTFSKSF+PGLRVGFGVA  +VCAAI DKKGNDDFGSTN+SQHIL   L ++LYY+HV  LR+VYREKRDCML++A+ YFS    VHW+HP GGLYVWMTLPESIETGFQSPLF++A+H +KVMYVPGEL YA D G+   EQ   QKNHMRLTF
Sbjct:  148 LGARIISVDTDESGMRMDSLDSTLEMLESQGQLDRVKMIYLVSDYENPSGLSLSVERRKQVIGVAQKWSKQHRIHILEDLAYRELCYDGPVLPSIRSFDKTGETVILTQTFSKSFAPGLRVGFGVASKQVCAAISDKKGNDDFGSTNMSQHILADALRENLYYDHVDYLRSVYREKRDCMLDSAESYFSKFRNVHWIHPRGGLYVWMTLPESIETGFQSPLFQKAIHQDKVMYVPGELCYAFDHGIDSSEQPVIQKNHMRLTF 410          
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A517VN93_9PLAN (2-aminoadipate transaminase n=7 Tax=Gimesia TaxID=1649453 RepID=A0A517VN93_9PLAN)

HSP 1 Score: 408 bits (1048), Expect = 1.650e-139
Identity = 195/263 (74.14%), Postives = 226/263 (85.93%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF 789
            LGARI+SVETDE GMRMDSL++TL+ LE+QG L +VK+IY+VSDYENPSG+SLSI+RR+Q+VE+A+KWSK  RI ILEDLAYRELCYDGPV PSIRSFD +G+ VILTQTFSKSF+PGLRVGFGVA   VC AI DKKGNDDFGSTN+SQHIL   L ++LYY+HV  LR+VYREKRDCML+AA+ YFS +  VHW+HP GGLYVWMTLP+SIETGFQS LF++A+H +KVMYVPGEL YA D  L   EQ A QKNHMRLTF
Sbjct:  148 LGARIISVETDESGMRMDSLDATLESLEAQGQLNRVKLIYLVSDYENPSGISLSIERRKQVVEVAQKWSKQHRIHILEDLAYRELCYDGPVLPSIRSFDQTGETVILTQTFSKSFAPGLRVGFGVASKRVCEAISDKKGNDDFGSTNMSQHILANALRENLYYDHVEYLRSVYREKRDCMLDAAEMYFSKLKDVHWIHPGGGLYVWMTLPDSIETGFQSSLFQKAIHEDKVMYVPGELCYAYDHWLGCNEQPAIQKNHMRLTF 410          
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A3B1DXR9_9ZZZZ (Transcriptional regulator, GntR family / Aspartate aminotransferase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DXR9_9ZZZZ)

HSP 1 Score: 315 bits (806), Expect = 7.270e-103
Identity = 161/263 (61.22%), Postives = 195/263 (74.14%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF 789
            LGA  V V+TDE GM M++L+  L+ LES G L +VKMIY+VS YENPSG+SLS +RR++ VE+A+KWSKSQRI ILED AYREL YDGP  PS+ SFD    +VIL QTFSKSFSPG+RVGFGV P ++ + I D+KGN+DFGS NL+QH+L  V     YY HV  L+N YR+KRDCML AA+ YFS++ GV WVHP+GGLYVWMTLP  I+TGFQS LF +A   E VMYVPGEL  A +       Q  P +N MRL+F
Sbjct:  151 LGAEAVPVKTDENGMCMEALDEKLEELESAGKLDRVKMIYLVSYYENPSGISLSEERRRRAVELAKKWSKSQRIHILEDAAYRELRYDGPQLPSVWSFDDEQQHVILAQTFSKSFSPGVRVGFGVVPRDLVSPICDRKGNEDFGSANLNQHLLATVFEQSAYYPHVEMLQNSYRKKRDCMLAAANRYFSNLDGVSWVHPHGGLYVWMTLPNEIKTGFQSKLFHQATEEEGVMYVPGELCQAGNV------QTVP-RNQMRLSF 406          
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A517ZKY9_9PLAN (2-aminoadipate transaminase n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZKY9_9PLAN)

HSP 1 Score: 307 bits (786), Expect = 8.610e-100
Identity = 155/263 (58.94%), Postives = 189/263 (71.86%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYAVDQGLPLEEQLAPQKNHMRLTF 789
            LGARI+ V TDE GMRMD+LE+ L+ +E+ GDL +VK+IY+VS YENPSG+SLS  RR + V IA++WSKSQRI+ILED AYREL YDGP  PSI SFD     VIL +TFSK+F+PGLR+GFGV P E+   I D+KGN+DFGS N +QH+L++V    LY  HVA LR +Y  KRD ML AA+ YF DIPGV WVHP+GGLYVWMTLPES +T     LF  AV    VMYVPGE  +A        E+     +HMRL++
Sbjct:  155 LGARIIPVATDEDGMRMDALEAKLEEIEAAGDLYRVKLIYLVSYYENPSGVSLSAQRRAESVAIAQRWSKSQRIYILEDAAYRELRYDGPELPSIWSFDADRQTVILAKTFSKTFAPGLRIGFGVVPAELERPICDRKGNEDFGSANFNQHLLSQVFRMGLYDSHVAGLREMYSAKRDAMLHAAETYFGDIPGVSWVHPHGGLYVWMTLPESCDTSLDGQLFREAVQTHGVMYVPGEFSFA-------GERAERPNHHMRLSY 410          
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A517T3C8_9PLAN (2-aminoadipate transaminase n=1 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517T3C8_9PLAN)

HSP 1 Score: 305 bits (782), Expect = 2.970e-99
Identity = 154/264 (58.33%), Postives = 191/264 (72.35%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYA-VDQGLPLEEQLAPQKNHMRLTF 789
            +GA  V VETDE GMR D L   L  LE  G L +VK+IY+VS++ENPSG+SL+ DRRQ+IVEIA  W+   ++++LED AYREL Y+G   PS+ S+D   D+VI TQTFSKSFSPGLRVGFGV P  +  A+  +KGN+DFGS +L+QHI+   L    Y EH+A ++N YR KRD ML AAD+YF+++ GVHWVHPNGGLYVWMTLPES+ T F SPLFERA   E+VMYVPGEL Y    + LP        +NHMRL+F
Sbjct:  152 VGAEAVCVETDENGMRPDGLRKKLQELEDAGQLDRVKLIYLVSNFENPSGISLATDRRQEIVEIAESWNGPHQLYVLEDSAYRELRYEGDDPPSVWSYDR--DSVIYTQTFSKSFSPGLRVGFGVVPEPLLLAMHSRKGNEDFGSAHLNQHIIAHALESGRYAEHLAEIKNSYRVKRDAMLAAADKYFANLDGVHWVHPNGGLYVWMTLPESMATSFDSPLFERATKVEQVMYVPGELCYGGPPESLP--------RNHMRLSF 405          
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Match: A0A3E0PWZ9_9BACT (PLP-dependent aminotransferase family protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0PWZ9_9BACT)

HSP 1 Score: 300 bits (768), Expect = 3.860e-97
Identity = 149/241 (61.83%), Postives = 184/241 (76.35%), Query Frame = 1
Query:    1 LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSGLSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDPSGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQHILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPNGGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYA 723
            +GA  VSV  DE GM   +L++TL  L+  G L +VKMIY VS Y+NPSG SLS +RR++IVEIAR+WS+ QRIF+LED AYREL YDGP+  SI S D S  +VI TQT+SK++SPGLRVGFGV P E+   I D+KGN+DFGS NL+Q ++  VL + LY +HV  ++  YR KR+ ML AA+E+FS + GV WVHP+GGLYVWM+LPE I TGF SPLF+RAVH E VMYVPGELFYA
Sbjct:  153 VGAEAVSVPADENGMLTGALDNTLAELDRAGQLDRVKMIYAVSYYDNPSGTSLSPERRREIVEIARRWSRRQRIFVLEDAAYRELRYDGPLLESIWSCDESRQHVIYTQTYSKTYSPGLRVGFGVVPRELVGPICDRKGNEDFGSANLNQRLIACVLRNGLYDKHVEDVQTAYRRKRNAMLAAAEEHFSKLAGVTWVHPHGGLYVWMSLPEQIHTGFNSPLFDRAVHHEGVMYVPGELFYA 393          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90511.20985.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517WMA2_9PLAN5.080e-18698.102-aminoadipate transaminase n=7 Tax=Gimesia TaxID=... [more]
A0A518AFN2_9PLAN3.310e-16386.692-aminoadipate transaminase n=3 Tax=Gimesia panare... [more]
A0A518IL62_9PLAN9.030e-14978.712-aminoadipate transaminase n=2 Tax=Gimesia TaxID=... [more]
A0A517VP00_9PLAN1.210e-14678.332-aminoadipate transaminase n=2 Tax=Gimesia aquari... [more]
A0A2E2BXX4_9PLAN2.150e-14274.90Transcriptional regulator n=2 Tax=Planctomycetacea... [more]
A0A517VN93_9PLAN1.650e-13974.142-aminoadipate transaminase n=7 Tax=Gimesia TaxID=... [more]
A0A3B1DXR9_9ZZZZ7.270e-10361.22Transcriptional regulator, GntR family / Aspartate... [more]
A0A517ZKY9_9PLAN8.610e-10058.942-aminoadipate transaminase n=3 Tax=Symmachiella T... [more]
A0A517T3C8_9PLAN2.970e-9958.332-aminoadipate transaminase n=1 Tax=Calycomorphotr... [more]
A0A3E0PWZ9_9BACT3.860e-9761.83PLP-dependent aminotransferase family protein n=1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90511contigM-pyrifera_M_contig90511:3..791 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score412.1
Seed ortholog evalue1.9e-112
Seed eggNOG ortholog344747.PM8797T_10829
Preferred nameMA20_07365
KEGG rclassRC00006
KEGG koko:K05825
KEGG ReactionR01939
KEGG Pathwayko00300,ko01100,ko01130,ko01210,map00300,map01100,map01130,map01210
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG1167 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
EggNOG OGs2IY9J@203682,COG1167@1,COG1167@2
COG Functional cat.EK
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size789
Cds size789
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816817.0491374-CDS-M-pyrifera_M_contig90511:2..7911622816817.0491374-CDS-M-pyrifera_M_contig90511:2..791Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90511 3..791 +
1692278195.6572554-CDS-M-pyrifera_M_contig90511:2..7911692278195.6572554-CDS-M-pyrifera_M_contig90511:2..791Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90511 3..791 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90511.20985.1prot_M-pyrifera_M_contig90511.20985.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90511 3..791 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90511.20985.1

>prot_M-pyrifera_M_contig90511.20985.1 ID=prot_M-pyrifera_M_contig90511.20985.1|Name=mRNA_M-pyrifera_M_contig90511.20985.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp
LGARIVSVETDEFGMRMDSLESTLDMLESQGDLAKVKMIYVVSDYENPSG
LSLSIDRRQQIVEIARKWSKSQRIFILEDLAYRELCYDGPVTPSIRSFDP
SGDNVILTQTFSKSFSPGLRVGFGVAPLEVCAAIRDKKGNDDFGSTNLSQ
HILTRVLSDHLYYEHVATLRNVYREKRDCMLEAADEYFSDIPGVHWVHPN
GGLYVWMTLPESIETGFQSPLFERAVHAEKVMYVPGELFYAVDQGLPLEE
QLAPQKNHMRLTF
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mRNA from alignment at M-pyrifera_M_contig90511:3..791+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90511.20985.1 ID=mRNA_M-pyrifera_M_contig90511.20985.1|Name=mRNA_M-pyrifera_M_contig90511.20985.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=789bp|location=Sequence derived from alignment at M-pyrifera_M_contig90511:3..791+ (Macrocystis pyrifera P11B4 male)
CTGGGAGCGCGCATCGTCTCTGTCGAAACCGATGAATTCGGCATGCGAAT GGACTCACTCGAATCAACGCTCGACATGCTGGAGTCCCAGGGGGATCTGG CAAAAGTCAAGATGATCTACGTAGTAAGCGATTATGAAAATCCTTCCGGT CTCTCCCTTTCGATTGATCGGCGACAGCAGATTGTCGAAATCGCTCGCAA GTGGTCAAAATCACAACGTATCTTCATCCTGGAAGACCTCGCCTATCGTG AACTCTGTTATGATGGCCCTGTGACACCAAGTATACGAAGCTTTGATCCC TCTGGAGATAATGTGATTCTTACACAAACTTTTTCCAAAAGTTTTTCCCC CGGGTTGAGAGTGGGATTTGGGGTTGCCCCGCTTGAAGTCTGCGCTGCCA TACGCGACAAGAAAGGAAATGATGACTTTGGATCTACGAATCTGAGTCAG CATATTTTAACTCGTGTATTGAGCGATCATTTATACTATGAACACGTTGC AACCCTCCGAAACGTGTATCGCGAAAAACGAGACTGCATGCTGGAAGCCG CTGATGAATATTTTTCAGATATTCCTGGCGTCCATTGGGTACATCCAAAT GGAGGACTGTACGTCTGGATGACCCTGCCCGAGTCAATTGAAACCGGCTT CCAAAGTCCACTCTTCGAACGCGCTGTACATGCAGAGAAAGTAATGTATG TTCCCGGCGAATTATTTTATGCTGTTGACCAAGGTCTCCCGCTCGAAGAA CAGCTGGCTCCACAAAAAAATCACATGCGGTTAACGTTT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90511:3..791+

>mRNA_M-pyrifera_M_contig90511.20985.1 ID=mRNA_M-pyrifera_M_contig90511.20985.1|Name=mRNA_M-pyrifera_M_contig90511.20985.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1578bp|location=Sequence derived from alignment at M-pyrifera_M_contig90511:3..791+ (Macrocystis pyrifera P11B4 male)
CTGGGAGCGCGCATCGTCTCTGTCGAAACCGATGAATTCGGCATGCGAAT
GGACTCACTCGAATCAACGCTCGACATGCTGGAGTCCCAGGGGGATCTGG
CAAAAGTCAAGATGATCTACGTAGTAAGCGATTATGAAAATCCTTCCGGT
CTCTCCCTTTCGATTGATCGGCGACAGCAGATTGTCGAAATCGCTCGCAA
GTGGTCAAAATCACAACGTATCTTCATCCTGGAAGACCTCGCCTATCGTG
AACTCTGTTATGATGGCCCTGTGACACCAAGTATACGAAGCTTTGATCCC
TCTGGAGATAATGTGATTCTTACACAAACTTTTTCCAAAAGTTTTTCCCC
CGGGTTGAGAGTGGGATTTGGGGTTGCCCCGCTTGAAGTCTGCGCTGCCA
TACGCGACAAGAAAGGAAATGATGACTTTGGATCTACGAATCTGAGTCAG
CATATTTTAACTCGTGTATTGAGCGATCATTTATACTATGAACACGTTGC
AACCCTCCGAAACGTGTATCGCGAAAAACGAGACTGCATGCTGGAAGCCG
CTGATGAATATTTTTCAGATATTCCTGGCGTCCATTGGGTACATCCAAAT
GGAGGACTGTACGTCTGGATGACCCTGCCCGAGTCAATTGAAACCGGCTT
CCAAAGTCCACTCTTCGAACGCGCTGTACATGCAGAGAAAGTAATGTATG
TTCCCGGCGAATTATTTTATGCTGTTGACCAAGGTCTCCCGCTCGAAGAA
CAGCTGGCTCCACAAAAAAATCACATGCGGTTAACGTTTCTGGGAGCGCG
CATCGTCTCTGTCGAAACCGATGAATTCGGCATGCGAATGGACTCACTCG
AATCAACGCTCGACATGCTGGAGTCCCAGGGGGATCTGGCAAAAGTCAAG
ATGATCTACGTAGTAAGCGATTATGAAAATCCTTCCGGTCTCTCCCTTTC
GATTGATCGGCGACAGCAGATTGTCGAAATCGCTCGCAAGTGGTCAAAAT
CACAACGTATCTTCATCCTGGAAGACCTCGCCTATCGTGAACTCTGTTAT
GATGGCCCTGTGACACCAAGTATACGAAGCTTTGATCCCTCTGGAGATAA
TGTGATTCTTACACAAACTTTTTCCAAAAGTTTTTCCCCCGGGTTGAGAG
TGGGATTTGGGGTTGCCCCGCTTGAAGTCTGCGCTGCCATACGCGACAAG
AAAGGAAATGATGACTTTGGATCTACGAATCTGAGTCAGCATATTTTAAC
TCGTGTATTGAGCGATCATTTATACTATGAACACGTTGCAACCCTCCGAA
ACGTGTATCGCGAAAAACGAGACTGCATGCTGGAAGCCGCTGATGAATAT
TTTTCAGATATTCCTGGCGTCCATTGGGTACATCCAAATGGAGGACTGTA
CGTCTGGATGACCCTGCCCGAGTCAATTGAAACCGGCTTCCAAAGTCCAC
TCTTCGAACGCGCTGTACATGCAGAGAAAGTAATGTATGTTCCCGGCGAA
TTATTTTATGCTGTTGACCAAGGTCTCCCGCTCGAAGAACAGCTGGCTCC
ACAAAAAAATCACATGCGGTTAACGTTT
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