mRNA_M-pyrifera_M_contig9043.20967.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: A0A6H5K0I2_9PHAE (OB_NTP_bind domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0I2_9PHAE) HSP 1 Score: 312 bits (800), Expect = 7.510e-100 Identity = 166/199 (83.42%), Postives = 178/199 (89.45%), Query Frame = 1 Query: 1 VDELAESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLACQDFGVVGASGGGGAGL-----ASRGAAADAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARLGALLSGALVEAEKRKMRNGGG 582 VD+LAESSGRRLA+RD+AI+K ILCQGLYPQFAVADAGNAGRAS+EQQYVTRPSGGLFMSPSSVLACQDFG+ +GG G+ +SRGAAA+AGRGDGLLCYGQLMETQRPFVSSVTPLPALQ LLLFSARVDTSEDASLI+FDHWLLVEMRG DPAL GQKLL VACGLRARL ALLSGALVEAE+RK G G Sbjct: 152 VDQLAESSGRRLARRDVAIIKAILCQGLYPQFAVADAGNAGRASNEQQYVTRPSGGLFMSPSSVLACQDFGIAATAGGSADGIHSSSSSSRGAAANAGRGDGLLCYGQLMETQRPFVSSVTPLPALQTLLLFSARVDTSEDASLILFDHWLLVEMRGRDPALNGQKLLAVACGLRARLDALLSGALVEAERRKGTGGDG 350
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: D8LEZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEZ4_ECTSI) HSP 1 Score: 318 bits (814), Expect = 3.870e-97 Identity = 169/197 (85.79%), Postives = 181/197 (91.88%), Query Frame = 1 Query: 1 VDELAESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLACQDFGVVGASGGGGAGL---ASRGAAADAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARLGALLSGALVEAEKRKMRNGGG 582 VD+LAESSGRRLA+RD+AI+K ILCQGLYPQFAVADAGNAGRAS+EQQYVTRPSGGLFMSPSSVLACQDFG+ +GG G+ +SRGAAA+AGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLI+FDHWLLVEMRG DPAL GQKLLVVACGLRARLGALLS ALVEAE+RK GGG Sbjct: 1114 VDQLAESSGRRLARRDVAIIKAILCQGLYPQFAVADAGNAGRASNEQQYVTRPSGGLFMSPSSVLACQDFGIAATAGGTANGIHSSSSRGAAANAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLILFDHWLLVEMRGRDPALNGQKLLVVACGLRARLGALLSEALVEAERRKGTGGGG 1310
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: A0A1V4KDW3_PATFA (OB_NTP_bind domain-containing protein n=1 Tax=Patagioenas fasciata monilis TaxID=372326 RepID=A0A1V4KDW3_PATFA) HSP 1 Score: 105 bits (262), Expect = 2.850e-23 Identity = 72/183 (39.34%), Postives = 102/183 (55.74%), Query Frame = 1 Query: 1 VDELAESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLACQDFGVVGASGGGGAGLASRGAAADAGRGDGLLCYGQLM------ETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARLGALL 531 V+EL +SG L ++ +LK++LC+GLYPQFAV D NAGR SEQ + T+ G+ + P+SV A + G A RG G +GL C QL+ ET +P++ + +PALQALLLFS +DT+ D S ++ D WL + + +D AL +LL A LR+ LL Sbjct: 37 VEELCAASGSALTAAELVLLKLVLCRGLYPQFAVPDRLNAGRKDSEQLFHTKTKQGVVLHPTSVFAASPELLHAKEG------AKRGGTE--GEPEGLSCQHQLLAFVSLLETNKPYLVNCVRVPALQALLLFSRSLDTNTDCSRLVADGWLEMAVPDADAAL---RLLAAAMRLRSSWDQLL 208
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: A0A7S4D4B5_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D4B5_HETAK) HSP 1 Score: 105 bits (263), Expect = 2.950e-23 Identity = 68/159 (42.77%), Postives = 87/159 (54.72%), Query Frame = 1 Query: 46 DIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLACQDFGVVGASGGGGAGLASRGAAADAGRGDG-LLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARL 519 D +LK +L GLYPQ A D+ N R SE QY TR GL P SV+ Q V + D GRG+G L+ Y +L+ETQ+ ++S +TPLPA+ ALLL S +DTSED +MFDHWL V A +++L AC LRA L Sbjct: 34 DTRVLKYLLLAGLYPQVAWFDSANVHRPISEHQYHTRHRAGLQPMPGSVVLAQCEDVAQS-------------VRDKGRGEGELVLYAELVETQKAYLSGITPLPAIPALLLSSRHIDTSEDCKHMMFDHWLHVSFESRSFA---KRILSTACQLRALL 176
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: A0A7L0MUN8_9PSIT (DHX34 helicase (Fragment) n=2 Tax=Amazona TaxID=12929 RepID=A0A7L0MUN8_9PSIT) HSP 1 Score: 99.0 bits (245), Expect = 1.400e-20 Identity = 72/190 (37.89%), Postives = 101/190 (53.16%), Query Frame = 1 Query: 1 VDELAESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLACQDFGVVGASGGGGAGLASRGAAADAGRG----DGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARLGALLSGALVEAEK 558 V EL +S L+ +A+LKV+LC+GLYPQ A+ D N+GR SEQ + TR G+ P+SV A + A RG A D G LL + L+ET +P++ + +PALQALLLFS +DTS D ++ D WL V + +D A+ +LL A LR+ LL L + E+ Sbjct: 675 VSELQAASCLALSSSQLALLKVVLCRGLYPQLALPDPFNSGRKDSEQVFHTRTKAGVVPHPTSVFAPSPELLHDKE------KAERGGARDPEEGLSHRHQLLAFVSLLETNKPYLVNCLRVPALQALLLFSQSLDTSADCGRLVADSWLEVTVPDADAAV---RLLATALQLRSAWEKLLQQLLGQREE 855
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: A0A8C5H251_9TELE (DExH-box helicase 34 n=4 Tax=Gouania willdenowi TaxID=441366 RepID=A0A8C5H251_9TELE) HSP 1 Score: 99.0 bits (245), Expect = 1.430e-20 Identity = 71/190 (37.37%), Postives = 104/190 (54.74%), Query Frame = 1 Query: 1 VDELAESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLAC-----QDFGVVGASGGGGAGLASRGAAADAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARLGALLSGALVEAE 555 V EL E+ G+ L R A+LK++LC+GLYPQ A+ D N+ R SEQ + T+ G+ + P+SV A Q F G G L+S+ LL + L+ET RP++S+ +PALQALLL +DT+ D + ++ D WL ++++ + AL K L A GLRA LL L ++E Sbjct: 780 VSELQEAVGQELTSRQQALLKLLLCRGLYPQLALPDTHNSTRKDSEQVFHTKNKQGVVIHPTSVFASDPEVLQVFEDDGGEMGPEKKLSSK---------HQLLSFVTLLETNRPYLSNCVRVPALQALLLVCDSLDTNADCTRLVVDGWLELQLKEQNEAL---KTLSTALGLRAEWERLLLAQLRQSE 957
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: UPI000E7773F4 (probable ATP-dependent RNA helicase DHX34 isoform X1 n=2 Tax=Terrapene carolina triunguis TaxID=2587831 RepID=UPI000E7773F4) HSP 1 Score: 98.2 bits (243), Expect = 2.120e-20 Identity = 69/186 (37.10%), Postives = 102/186 (54.84%), Query Frame = 1 Query: 1 VDELAESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLA--------CQDFGVVGASGGGGAGLASRGAAADAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARLGALLS 534 VDEL ++G L+ +A+LK++LC+GLYPQ AV D N+ R S+Q + T+ G+ + P+ V A ++ G S G GL+SR LL + L+ET +P++ + PALQALLLFS +DTS D + ++ D WL + + S+ AL +LL A LRA LL+ Sbjct: 260 VDELQAAAGAALSSHQLALLKLVLCRGLYPQLAVPDQYNSCRKDSDQIFHTKNKQGIVLHPTCVFAGSPELLQTTEEKAEPGRSRGSQEGLSSR---------HQLLAFVSLLETNKPYLVNCLRAPALQALLLFSRALDTSADCTRLVADSWLELCVPDSEAAL---RLLSAALQLRAAWEGLLN 433
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: A0A674K2N1_TERCA (DExH-box helicase 34 n=1 Tax=Terrapene carolina triunguis TaxID=2587831 RepID=A0A674K2N1_TERCA) HSP 1 Score: 98.2 bits (243), Expect = 2.300e-20 Identity = 69/186 (37.10%), Postives = 102/186 (54.84%), Query Frame = 1 Query: 1 VDELAESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLA--------CQDFGVVGASGGGGAGLASRGAAADAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARLGALLS 534 VDEL ++G L+ +A+LK++LC+GLYPQ AV D N+ R S+Q + T+ G+ + P+ V A ++ G S G GL+SR LL + L+ET +P++ + PALQALLLFS +DTS D + ++ D WL + + S+ AL +LL A LRA LL+ Sbjct: 260 VDELQAAAGAALSSHQLALLKLVLCRGLYPQLAVPDQYNSCRKDSDQIFHTKNKQGIVLHPTCVFAGSPELLQTTEEKAEPGRSRGSQEGLSSR---------HQLLAFVSLLETNKPYLVNCLRAPALQALLLFSRALDTSADCTRLVADSWLELCVPDSEAAL---RLLSAALQLRAAWEGLLN 433
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: A0A151MYR5_ALLMI (Putative ATP-dependent RNA helicase DHX34 isoform A n=3 Tax=Alligator mississippiensis TaxID=8496 RepID=A0A151MYR5_ALLMI) HSP 1 Score: 97.4 bits (241), Expect = 4.660e-20 Identity = 70/183 (38.25%), Postives = 103/183 (56.28%), Query Frame = 1 Query: 1 VDELAESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLACQDFGVV-----GASGGGGAGLASRGAAADAGRGDGLLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARLGALLS 534 VDEL SG L+ + +A+LK++LC+GLYPQ AV D+ N+ R S+Q + TR G+ + P+SV A ++ G S GL+SR LL + L+ET +P++ + +PALQALLLFS +DTS D + ++ D WL + + S+ AL +LL A RA LL+ Sbjct: 473 VDELQAVSGSALSPQQLALLKLVLCRGLYPQLAVPDSFNSCRKDSDQIFHTRSKQGVVLHPTSVFATSPELLLPKEERGKSQESKEGLSSR---------HQLLAFVSLLETNKPYLVNCVRVPALQALLLFSRCLDTSADCTRLVADAWLELHVPDSEAAL---RLLSAALQHRAAWERLLN 643
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Match: F7FBJ8_ORNAN (DExH-box helicase 34 n=4 Tax=Monotremata TaxID=9255 RepID=F7FBJ8_ORNAN) HSP 1 Score: 97.4 bits (241), Expect = 4.900e-20 Identity = 72/194 (37.11%), Postives = 106/194 (54.64%), Query Frame = 1 Query: 1 VDEL--AESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVTRPSGGLFMSPSSVLACQDFGVVGASGGGGAGLASRGAAADAGRGDG------LLCYGQLMETQRPFVSSVTPLPALQALLLFSARVDTSEDASLIMFDHWLLVEMRGSDPALTGQKLLVVACGLRARLGALLSGALVEAEK 558 VDEL A S+GR L++ ++A+LK++L +GLYPQ A AD N+ R S+Q + T+ G + P+SV A + +G + R DG LL + L+ET +P++ + +PALQALLLFS +DT+ D S I+ D WL + + GS+ L +LL VA LR+R LL L + Sbjct: 788 VDELQAAASAGRDLSRDELALLKLVLARGLYPQLAAADHFNSCRKDSDQIFHTKTKQGTVLHPTSVFASNPEVL-------------QGREKEGRRSDGKSSQHQLLAFVSLLETTKPYLVNCVRVPALQALLLFSRCLDTNGDCSRIVADGWLELGLDGSEGTL---QLLSVAVQLRSRWEQLLQQQLARGHR 965 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9043.20967.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9043.20967.1 >prot_M-pyrifera_M_contig9043.20967.1 ID=prot_M-pyrifera_M_contig9043.20967.1|Name=mRNA_M-pyrifera_M_contig9043.20967.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp VDELAESSGRRLAQRDIAILKVILCQGLYPQFAVADAGNAGRASSEQQYVback to top mRNA from alignment at M-pyrifera_M_contig9043:9755..11378- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9043.20967.1 ID=mRNA_M-pyrifera_M_contig9043.20967.1|Name=mRNA_M-pyrifera_M_contig9043.20967.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1624bp|location=Sequence derived from alignment at M-pyrifera_M_contig9043:9755..11378- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9043:9755..11378- >mRNA_M-pyrifera_M_contig9043.20967.1 ID=mRNA_M-pyrifera_M_contig9043.20967.1|Name=mRNA_M-pyrifera_M_contig9043.20967.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1170bp|location=Sequence derived from alignment at M-pyrifera_M_contig9043:9755..11378- (Macrocystis pyrifera P11B4 male)back to top |