mRNA_M-pyrifera_M_contig90421.20961.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: A0A5Q2RKK1_9ACTN (Uncharacterized protein n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RKK1_9ACTN) HSP 1 Score: 95.1 bits (235), Expect = 4.080e-22 Identity = 46/71 (64.79%), Postives = 57/71 (80.28%), Query Frame = 1 Query: 4 ESLTPLPPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKTVVDVVVEA 216 + PLP VGR ++ RKVRLGDV P+G+LRFD+L R+AQDVSNDDT DA LEDD+ W+VR+TVV+V EA Sbjct: 32 DGCVPLPAVGRAFTGRRKVRLGDVSPNGRLRFDALARFAQDVSNDDTVDAGLEDDMAWVVRRTVVEVHTEA 102
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: A0A3N5KBC1_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A3N5KBC1_9ACTN) HSP 1 Score: 81.6 bits (200), Expect = 8.610e-17 Identity = 37/63 (58.73%), Postives = 46/63 (73.02%), Query Frame = 1 Query: 16 PLPPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKTVVDV 204 P+P GR Y + R VRLGD P G+LRFD L RY QDVSNDDT DA E+D+ W+VR+T ++V Sbjct: 81 PVPERGRRYQRTRPVRLGDSSPGGRLRFDGLARYLQDVSNDDTRDAAFENDMAWVVRRTTIEV 143
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: A0A7Y2GRW6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GRW6_9ACTN) HSP 1 Score: 78.2 bits (191), Expect = 7.850e-16 Identity = 39/62 (62.90%), Postives = 46/62 (74.19%), Query Frame = 1 Query: 19 LPPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKTVVDV 204 +P GRT+S +VRLGDV DG LR D+LVRY+Q +SNDDT D LEDDL WI R TV+DV Sbjct: 10 VPHEGRTFSICDRVRLGDVSRDGHLRLDALVRYSQIISNDDTNDVGLEDDLAWIARSTVIDV 71
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: A0A4P5S4H5_9ACTN (Acyl-[acyl-carrier-protein] thioesterase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5S4H5_9ACTN) HSP 1 Score: 75.9 bits (185), Expect = 5.810e-15 Identity = 37/65 (56.92%), Postives = 47/65 (72.31%), Query Frame = 1 Query: 10 LTPLPPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKTVVDV 204 + P P GR +S VR+VRLGD P G+LR D+LV+Y QDVSNDD+ DA D W+VR+TV+DV Sbjct: 12 MAPKPDAGRFFSTVRRVRLGDSSPGGRLRLDALVQYLQDVSNDDSRDAQWSDPHGWVVRRTVLDV 76
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: UPI001AA097A9 (thioesterase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA097A9) HSP 1 Score: 75.9 bits (185), Expect = 5.810e-15 Identity = 37/68 (54.41%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 1 AESLTPLPPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKTVVDV 204 A+ L +P GR Y R VR GDV P G+ RFD+L + QDVS+DDT DA L+DDL W+VR+TV +V Sbjct: 6 ADRLVDVPTTGRVYRAERLVRFGDVSPAGRARFDALACFLQDVSSDDTADAGLDDDLAWVVRRTVFEV 73
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: A0A2G4GG43_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobium sp. TaxID=1872112 RepID=A0A2G4GG43_9ACTN) HSP 1 Score: 72.4 bits (176), Expect = 1.210e-13 Identity = 35/61 (57.38%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 22 PPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKTVVDV 204 P GR ++ R+VRLGD P+G+LR DS+ RY QDVSNDDT DA D W+VR+TV+DV Sbjct: 16 PGSGRQFTARRRVRLGDATPNGRLRLDSVARYLQDVSNDDTRDADWSDPHWWVVRRTVIDV 76
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: A0A2D6U8N5_9ACTN (Uncharacterized protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U8N5_9ACTN) HSP 1 Score: 72.8 bits (177), Expect = 1.470e-13 Identity = 32/68 (47.06%), Postives = 48/68 (70.59%), Query Frame = 1 Query: 1 AESLTPLPPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKTVVDV 204 A +TP P GR + R++RL +V P G+ R D+ VR+ QDV+ DD+TD+ L D +TW+VR+T++DV Sbjct: 68 AAEITPKPATGRIFENTRRIRLAEVDPTGRCRLDATVRHLQDVARDDSTDSGLTDPMTWVVRRTMLDV 135
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: A0A2E8LBP0_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LBP0_9ACTN) HSP 1 Score: 72.0 bits (175), Expect = 4.150e-13 Identity = 32/68 (47.06%), Postives = 47/68 (69.12%), Query Frame = 1 Query: 1 AESLTPLPPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKTVVDV 204 A +TP P GR + R++RL +V P G+ R D+ VR QDV+ DD+TD+ L D +TW+VR+T++DV Sbjct: 149 AAEMTPKPATGRVFENARRIRLAEVDPTGRCRLDATVRQLQDVARDDSTDSGLTDPMTWVVRRTMLDV 216
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: A0A6L6E002_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6L6E002_9ACTN) HSP 1 Score: 70.5 bits (171), Expect = 6.410e-13 Identity = 33/61 (54.10%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 22 PPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKTVVDV 204 P GR ++ R+VRLGD P+G+LR DS+ RY QDVSNDDT ++ D W+VR+TV+DV Sbjct: 16 PGAGRQFTARRRVRLGDATPNGRLRLDSVARYLQDVSNDDTRESNWSDPHWWVVRRTVIDV 76
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Match: A0A2G4I5A8_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobium sp. TaxID=1872112 RepID=A0A2G4I5A8_9ACTN) HSP 1 Score: 68.9 bits (167), Expect = 2.860e-12 Identity = 30/58 (51.72%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 19 LPPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDAVLEDDLTWIVRKT 192 LP +GR +S VRKVRLGDV P G+LR D++ RY QD++ DD+ D ++ +W+VR+T Sbjct: 30 LPDLGRRFSAVRKVRLGDVTPKGRLRLDAVARYLQDIATDDSLDGGYDEPHSWVVRRT 87 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90421.20961.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90421.20961.1 >prot_M-pyrifera_M_contig90421.20961.1 ID=prot_M-pyrifera_M_contig90421.20961.1|Name=mRNA_M-pyrifera_M_contig90421.20961.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp AESLTPLPPVGRTYSQVRKVRLGDVRPDGKLRFDSLVRYAQDVSNDDTTDback to top mRNA from alignment at M-pyrifera_M_contig90421:572..787+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90421.20961.1 ID=mRNA_M-pyrifera_M_contig90421.20961.1|Name=mRNA_M-pyrifera_M_contig90421.20961.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=216bp|location=Sequence derived from alignment at M-pyrifera_M_contig90421:572..787+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90421:572..787+ >mRNA_M-pyrifera_M_contig90421.20961.1 ID=mRNA_M-pyrifera_M_contig90421.20961.1|Name=mRNA_M-pyrifera_M_contig90421.20961.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig90421:572..787+ (Macrocystis pyrifera P11B4 male)back to top |