prot_M-pyrifera_M_contig90380.20956.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90380.20956.1
Unique Nameprot_M-pyrifera_M_contig90380.20956.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: A0A5A8DX42_CAFRO (40S ribosomal protein S3a n=3 Tax=Sar TaxID=2698737 RepID=A0A5A8DX42_CAFRO)

HSP 1 Score: 143 bits (361), Expect = 2.800e-40
Identity = 70/102 (68.63%), Postives = 86/102 (84.31%), Query Frame = 0
Query:    2 VDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            VDPFTRKEWY V+VP+LF  R  G+TPIN+TAG++IASE++KGR+FEISLGDLN+ S+   FRKMR +VE+V+GKD L NF+GMD TRDKLASL RK Q+ I
Sbjct:   42 VDPFTRKEWYDVKVPSLFTNRVAGKTPINRTAGQKIASEEMKGRVFEISLGDLNKSSDAD-FRKMRLVVEEVQGKDALCNFYGMDTTRDKLASLFRKCQTTI 142          
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: A0A0N8EFA4_9CRUS (40S ribosomal protein S3a n=4 Tax=Eukaryota TaxID=2759 RepID=A0A0N8EFA4_9CRUS)

HSP 1 Score: 141 bits (356), Expect = 8.610e-40
Identity = 62/103 (60.19%), Postives = 87/103 (84.47%), Query Frame = 0
Query:    1 SVDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            +VDPFTRK+WY ++ PA+F +R+ G+T +N+TAG +IASE +KGR+FE+SLGDLN+D EE++FRK++   E+++G  ++  FHGMDFTRDKL SL+RKWQSLI
Sbjct:   20 AVDPFTRKDWYDLKAPAIFSERNFGKTLVNRTAGTKIASEGLKGRVFEVSLGDLNKD-EEQSFRKIKLCAEEIQGTQIVTGFHGMDFTRDKLCSLIRKWQSLI 121          
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: A0A812YDV0_9DINO (Hypothetical protein (Fragment) n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812YDV0_9DINO)

HSP 1 Score: 140 bits (352), Expect = 1.790e-39
Identity = 64/102 (62.75%), Postives = 84/102 (82.35%), Query Frame = 0
Query:    2 VDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            VDPFTRKEWY ++VPA+F+ R  G+TP+ KT G +IASE +KGR+FEISLGDLN+ +E+  FRK+R + E+V+G  VL NF+GM FTRDKL SL+RK+Q+LI
Sbjct:   21 VDPFTRKEWYDIKVPAIFQNRLCGKTPVTKTIGTKIASEQLKGRVFEISLGDLNKQAEDAEFRKIRLVCEEVQGSAVLCNFYGMTFTRDKLCSLVRKFQTLI 122          
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: A0A485L1N2_9STRA (40S ribosomal protein S3a n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485L1N2_9STRA)

HSP 1 Score: 140 bits (353), Expect = 2.430e-39
Identity = 61/103 (59.22%), Postives = 87/103 (84.47%), Query Frame = 0
Query:    1 SVDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            +VDPFTRK+WY +RVP +F++R +G+T +N+T+G +IASE +KGR+ E+ L DLN+D E+++FRK+R  VEDV+G  V+ NFHGMDFTRDK+ SL++KWQ+LI
Sbjct:   20 AVDPFTRKDWYDIRVPGIFQQRTIGKTLVNRTSGTKIASEGLKGRVIEVCLADLNKD-EDQSFRKVRLAVEDVQGTQVITNFHGMDFTRDKVCSLIKKWQTLI 121          
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: A0A0L0FUS5_9EUKA (40S ribosomal protein S3a n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0FUS5_9EUKA)

HSP 1 Score: 139 bits (351), Expect = 4.620e-39
Identity = 61/103 (59.22%), Postives = 88/103 (85.44%), Query Frame = 0
Query:    1 SVDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            +VDPF++K+WY ++ P++F KR+VG+T +N+T G +IAS+ + GR+FE+SL DLN+D E++A+RKMR +VEDV+GK+V+ NFHGMDFT DKL SL++KW SLI
Sbjct:   20 TVDPFSKKDWYDIKAPSVFTKRNVGKTLVNRTQGTKIASDGLMGRVFEVSLADLNDD-EDQAYRKMRLVVEDVQGKNVITNFHGMDFTTDKLHSLVKKWHSLI 121          
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: RS3A_ARTSF (40S ribosomal protein S3a n=1 Tax=Artemia franciscana TaxID=6661 RepID=RS3A_ARTSF)

HSP 1 Score: 138 bits (348), Expect = 1.640e-38
Identity = 63/103 (61.17%), Postives = 85/103 (82.52%), Query Frame = 0
Query:    2 VDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSE-EKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            VDPFTRK+WY V+ P+LF  RD+G+T +N+TAG +IAS+ +KGR+FE+SL DL  +SE E++FRK R I E+V+G+ +L NFHGMDFT DKL SL++KWQ+LI
Sbjct:   22 VDPFTRKDWYDVKAPSLFTNRDIGKTLVNRTAGTKIASDSLKGRVFEVSLADLQGESEAERSFRKFRLIAEEVQGRYLLTNFHGMDFTTDKLRSLVKKWQTLI 124          
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: A0A0B6YSH2_9EUPU (40S ribosomal protein S3a n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YSH2_9EUPU)

HSP 1 Score: 138 bits (347), Expect = 1.760e-38
Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = 0
Query:    2 VDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            VDPFTRKEWY ++ P +F  R VG+T INKT G +IASE +KGR+FE+SLGDLN+   E  FRK R I EDV+G++VL NFHGM FTRDKL+S+++KW +LI
Sbjct:   19 VDPFTRKEWYDIKAPGMFTTRQVGKTFINKTQGTKIASEGLKGRVFEVSLGDLNKS--ESTFRKFRLICEDVQGRNVLTNFHGMSFTRDKLSSIVKKWHTLI 118          
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: M9V9B3_9BILA (Small subunit ribosomal protein 1 (Fragment) n=2 Tax=Pristionchus TaxID=54125 RepID=M9V9B3_9BILA)

HSP 1 Score: 136 bits (342), Expect = 2.340e-38
Identity = 60/103 (58.25%), Postives = 81/103 (78.64%), Query Frame = 0
Query:    1 SVDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            +VDPFTRKEWY ++ P++F  R VG+T +N+T G +IAS+ +KGR+FE+SLGDLN    E  FRK R I EDV+GK+VL NFHGM FTRDKL S+++KW +++
Sbjct:   12 AVDPFTRKEWYDIKAPSMFTNRQVGKTLVNRTQGTKIASDGLKGRVFEVSLGDLN--GSESDFRKFRLICEDVQGKNVLTNFHGMSFTRDKLCSIVKKWHTMV 112          
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: A0A090MYY9_STRRB (40S ribosomal protein S3a n=5 Tax=Strongyloididae TaxID=6246 RepID=A0A090MYY9_STRRB)

HSP 1 Score: 137 bits (345), Expect = 3.510e-38
Identity = 63/102 (61.76%), Postives = 82/102 (80.39%), Query Frame = 0
Query:    2 VDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            +DPFTRKEWY ++ P++F  R VG+T INKT G +IASE +KGR+FE+SLGDLN+   E  FRK R I EDV+G++VL NFHGM+FTRDKL S+++KW +LI
Sbjct:   19 IDPFTRKEWYDIKAPSMFTTRQVGKTFINKTQGTKIASEGLKGRVFEVSLGDLNKS--ESDFRKFRLICEDVQGRNVLTNFHGMNFTRDKLCSIVKKWHTLI 118          
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Match: A0A1Y3EU80_9BILA (40S ribosomal protein S3a n=1 Tax=Trichinella nativa TaxID=6335 RepID=A0A1Y3EU80_9BILA)

HSP 1 Score: 136 bits (342), Expect = 4.650e-38
Identity = 65/102 (63.73%), Postives = 80/102 (78.43%), Query Frame = 0
Query:    2 VDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEISLGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQSLI 103
            VDPFTRKEWY V+ PALF  RD+G+T +N+T G +IASE +KGR++E+SLGDLN D  E  FRK R I E V+G   L NFHGM+FTRDKL SL++KWQ+LI
Sbjct:   22 VDPFTRKEWYNVKAPALFMHRDIGQTCVNRTQGTKIASEGLKGRVYEVSLGDLNND--EADFRKFRLICEYVQGDTCLTNFHGMNFTRDKLCSLVKKWQTLI 121          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90380.20956.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DX42_CAFRO2.800e-4068.6340S ribosomal protein S3a n=3 Tax=Sar TaxID=269873... [more]
A0A0N8EFA4_9CRUS8.610e-4060.1940S ribosomal protein S3a n=4 Tax=Eukaryota TaxID=... [more]
A0A812YDV0_9DINO1.790e-3962.75Hypothetical protein (Fragment) n=1 Tax=Symbiodini... [more]
A0A485L1N2_9STRA2.430e-3959.2240S ribosomal protein S3a n=11 Tax=Saprolegniaceae... [more]
A0A0L0FUS5_9EUKA4.620e-3959.2240S ribosomal protein S3a n=1 Tax=Sphaeroforma arc... [more]
RS3A_ARTSF1.640e-3861.1740S ribosomal protein S3a n=1 Tax=Artemia francisc... [more]
A0A0B6YSH2_9EUPU1.760e-3862.7540S ribosomal protein S3a n=1 Tax=Arion vulgaris T... [more]
M9V9B3_9BILA2.340e-3858.25Small subunit ribosomal protein 1 (Fragment) n=2 T... [more]
A0A090MYY9_STRRB3.510e-3861.7640S ribosomal protein S3a n=5 Tax=Strongyloididae ... [more]
A0A1Y3EU80_9BILA4.650e-3863.7340S ribosomal protein S3a n=1 Tax=Trichinella nati... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001593Ribosomal protein S3AeSMARTSM01397Ribosomal_S3Ae_2coord: 2..103
e-value: 1.1E-10
score: 51.5
IPR001593Ribosomal protein S3AePFAMPF01015Ribosomal_S3Aecoord: 2..103
e-value: 1.7E-41
score: 142.0
NoneNo IPR availablePANTHERPTHR11830:SF040S RIBOSOMAL PROTEIN S3Acoord: 2..103
NoneNo IPR availablePANTHERPTHR1183040S RIBOSOMAL PROTEIN S3Acoord: 2..103
IPR018281Ribosomal protein S3Ae, conserved sitePROSITEPS01191RIBOSOMAL_S3AEcoord: 42..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90380contigM-pyrifera_M_contig90380:485..793 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90380.20956.1mRNA_M-pyrifera_M_contig90380.20956.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90380 485..793 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90380.20956.1 ID=prot_M-pyrifera_M_contig90380.20956.1|Name=mRNA_M-pyrifera_M_contig90380.20956.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
SVDPFTRKEWYGVRVPALFEKRDVGRTPINKTAGKRIASEDIKGRIFEIS
LGDLNEDSEEKAFRKMRFIVEDVRGKDVLLNFHGMDFTRDKLASLLRKWQ
SLI
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001593Ribosomal_S3Ae
IPR018281Ribosomal_S3Ae_CS