mRNA_M-pyrifera_M_contig9037.20952.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: A0A6H5L3Q3_9PHAE (CAP-Gly domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Q3_9PHAE) HSP 1 Score: 129 bits (324), Expect = 4.870e-33 Identity = 67/90 (74.44%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 1 QFYGESKIRRRQQVDALHHCTLREASISKAGELETLSEAVSSLVHVDLKGNLLSDWQEIGLIASQIPLLEILSVGSNKMKPSTGVPSSLA 270 +FYGESKIR+RQQVD L HCTLRE SISKAGEL L+EA + V VDLK NLLSDWQE+GLIASQ PLLEILSVGSN K GVP SL+ Sbjct: 161 EFYGESKIRQRQQVDTLDHCTLRECSISKAGELPALAEAAGAFVSVDLKANLLSDWQEVGLIASQTPLLEILSVGSNMFKTPEGVPPSLS 250
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: D7G0Z3_ECTSI (Putative: beta-tubulin folding cofactor E n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G0Z3_ECTSI) HSP 1 Score: 128 bits (322), Expect = 1.100e-32 Identity = 67/90 (74.44%), Postives = 73/90 (81.11%), Query Frame = 1 Query: 1 QFYGESKIRRRQQVDALHHCTLREASISKAGELETLSEAVSSLVHVDLKGNLLSDWQEIGLIASQIPLLEILSVGSNKMKPSTGVPSSLA 270 +FYGESKIRRRQQVD L HCTLRE SISKAGEL L+EA + V+VDLK NLLSDWQE+GLIASQ LLEILSVGSN K GVP SL+ Sbjct: 133 EFYGESKIRRRQQVDTLDHCTLRECSISKAGELPALAEAAGAFVNVDLKANLLSDWQEVGLIASQTKLLEILSVGSNMFKTPDGVPPSLS 222
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: A0A851NYD1_9GALL (Tubulin-specific chaperone E (Fragment) n=1 Tax=Penelope pileata TaxID=1118817 RepID=A0A851NYD1_9GALL) HSP 1 Score: 65.5 bits (158), Expect = 1.910e-10 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 1 QFYGESKIRRRQ-QVDALHHCTLREASISKAGELETLSEAVSSLVHVDLKGNLLSDWQEIGLIASQIPLLEILSVGSNKMK-PSTGVPSSLA 270 +F G I +Q Q+ L H ++RE ++S AG+ E +S +++ +DL NL+S W + IASQ+P LE L + NKMK PST VP S A Sbjct: 113 EFVGRDFIAEKQRQLHQLVHVSVRECAVSHAGQKEEISRTCANIRCIDLSKNLISCWDTVTDIASQVPDLETLDISGNKMKFPSTSVPESSA 204
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: A0A835YMA8_9STRA (Putative beta-tubulin folding cofactor E n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMA8_9STRA) HSP 1 Score: 62.8 bits (151), Expect = 1.730e-9 Identity = 36/69 (52.17%), Postives = 41/69 (59.42%), Query Frame = 1 Query: 1 QFYGESKIRRRQQVDALHHCTLREASISKAG-----------ELETLSEAVSSLVHVDLKGNLLSDWQE 174 +F+GE KIR RQQV AL CTLR AS+S+ G LS A LV +DLK NLLSDWQE Sbjct: 129 EFFGEGKIRLRQQVSALDACTLRGASVSRCGGSGGXXXXXXXSTSALSRAAGHLVSLDLKDNLLSDWQE 197
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: A0A226MJR9_CALSU (Ubiquitin-like domain-containing protein n=2 Tax=Odontophoridae TaxID=224313 RepID=A0A226MJR9_CALSU) HSP 1 Score: 62.4 bits (150), Expect = 2.140e-9 Identity = 38/94 (40.43%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 1 QFYGESKIRRRQQVDALH---HCTLREASISKAGELETLSEAVSSLVHVDLKGNLLSDWQEIGLIASQIPLLEILSVGSNKMK-PSTGVPSSLA 270 +F G I ++Q+ LH H ++ E ++S AG+ E +S +++ +DL NLLS W + IASQ+P LE L + NKMK PST V S A Sbjct: 73 EFVGRDSIEKKQRQVQLHQLVHVSVCECAVSHAGQKEEISGTCANIRRIDLSKNLLSSWDTVIDIASQLPHLETLDISGNKMKFPSTSVSVSSA 166
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: U3IDV7_ANAPP (Tubulin-specific chaperone E n=9 Tax=Anatidae TaxID=8830 RepID=U3IDV7_ANAPP) HSP 1 Score: 61.6 bits (148), Expect = 4.310e-9 Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 13 ESKIRRRQQVDALHHCTLREASISKAGELETLSEAVSSLVHVDLKGNLLSDWQEIGLIASQIPLLEILSVGSNKMK-PSTGV 255 +S ++ Q++ L ++RE ++S AG+ E +S +++ H++L NLLS W + IASQ+P LE L++ NKMK PST + Sbjct: 112 DSIAEQQSQLNLLVDISVRECAVSHAGQKEEISRTCANIRHINLSKNLLSSWDTVTDIASQVPNLETLNISENKMKFPSTSI 193
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: A0A8B9VM82_9AVES (Tubulin-specific chaperone E n=1 Tax=Anas zonorhyncha TaxID=75864 RepID=A0A8B9VM82_9AVES) HSP 1 Score: 61.6 bits (148), Expect = 4.400e-9 Identity = 32/82 (39.02%), Postives = 53/82 (64.63%), Query Frame = 1 Query: 13 ESKIRRRQQVDALHHCTLREASISKAGELETLSEAVSSLVHVDLKGNLLSDWQEIGLIASQIPLLEILSVGSNKMK-PSTGV 255 +S ++ Q++ L ++RE ++S AG+ E +S +++ H++L NLLS W + IASQ+P LE L++ NKMK PST + Sbjct: 295 DSIAEQQSQLNLLVDISVRECAVSHAGQKEEISRTCANIRHINLSKNLLSSWDTVTDIASQVPNLETLNISENKMKFPSTSI 376
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: A0A8B9BLM1_9AVES (Tubulin-specific chaperone E n=13 Tax=Anatidae TaxID=8830 RepID=A0A8B9BLM1_9AVES) HSP 1 Score: 61.2 bits (147), Expect = 5.880e-9 Identity = 32/82 (39.02%), Postives = 52/82 (63.41%), Query Frame = 1 Query: 13 ESKIRRRQQVDALHHCTLREASISKAGELETLSEAVSSLVHVDLKGNLLSDWQEIGLIASQIPLLEILSVGSNKMK-PSTGV 255 +S ++ Q++ L ++RE ++S AG+ E +S ++ H++L NLLS W + IASQ+P LE L++ NKMK PST + Sbjct: 117 DSIAEQQSQLNLLVDISVRECAVSHAGQKEEISRTCGNIRHINLSKNLLSSWDTVTDIASQVPNLETLNISENKMKFPSTSI 198
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: A0A7K9AKW1_DRONO (Tubulin-specific chaperone E (Fragment) n=12 Tax=Aves TaxID=8782 RepID=A0A7K9AKW1_DRONO) HSP 1 Score: 61.2 bits (147), Expect = 5.900e-9 Identity = 33/87 (37.93%), Postives = 58/87 (66.67%), Query Frame = 1 Query: 1 QFYG-ESKIRRRQQVDALHHCTLREASISKAGELETLSEAVSSLVHVDLKGNLLSDWQEIGLIASQIPLLEILSVGSNKMK-PSTGV 255 +F G +S I +++Q++ L ++RE ++S AG+ E +S +++ H++L NL+S W+ + IASQ+ LE L++ NKMK PST + Sbjct: 113 EFVGMDSIIEQQRQLNQLVDISVRECAVSHAGQKEEISRTCANIRHINLSKNLISSWETVTDIASQVQNLETLNISENKMKFPSTSI 199
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Match: A0A7K9V1A6_ANSSE (Tubulin-specific chaperone E (Fragment) n=3 Tax=Neognathae TaxID=8825 RepID=A0A7K9V1A6_ANSSE) HSP 1 Score: 60.8 bits (146), Expect = 8.060e-9 Identity = 34/89 (38.20%), Postives = 54/89 (60.67%), Query Frame = 1 Query: 1 QFYGESKIRRRQ---QVDALHHCTLREASISKAGELETLSEAVSSLVHVDLKGNLLSDWQEIGLIASQIPLLEILSVGSNKMK-PSTGV 255 +F G I +Q Q++ L ++RE ++S AG+ E + +++ H++L NLLS W + IASQ+P LE L++ NKMK PST + Sbjct: 113 EFVGMDSIAEQQRQVQLNQLVDISVRECAVSHAGQKEEIGRTCANIRHINLSKNLLSSWDTVTDIASQVPNLETLNISENKMKFPSTSI 201 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9037.20952.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig9037.20952.1 >prot_M-pyrifera_M_contig9037.20952.1 ID=prot_M-pyrifera_M_contig9037.20952.1|Name=mRNA_M-pyrifera_M_contig9037.20952.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp QFYGESKIRRRQQVDALHHCTLREASISKAGELETLSEAVSSLVHVDLKGback to top mRNA from alignment at M-pyrifera_M_contig9037:261..3693+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig9037.20952.1 ID=mRNA_M-pyrifera_M_contig9037.20952.1|Name=mRNA_M-pyrifera_M_contig9037.20952.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=3433bp|location=Sequence derived from alignment at M-pyrifera_M_contig9037:261..3693+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig9037:261..3693+ >mRNA_M-pyrifera_M_contig9037.20952.1 ID=mRNA_M-pyrifera_M_contig9037.20952.1|Name=mRNA_M-pyrifera_M_contig9037.20952.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=540bp|location=Sequence derived from alignment at M-pyrifera_M_contig9037:261..3693+ (Macrocystis pyrifera P11B4 male)back to top |