mRNA_M-pyrifera_M_contig90358.20949.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A061S2S3_9CHLO (Tubulin-folding cofactor B n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061S2S3_9CHLO) HSP 1 Score: 115 bits (289), Expect = 1.670e-29 Identity = 59/113 (52.21%), Postives = 78/113 (69.03%), Query Frame = 1 Query: 1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDG--DAMPKDLDGVEVGMRCEVFP 333 C L DDS+KLGFYS DG +H+VDTDP SLS G L+D S+VEKYVMSDE YD+R+GT R +K+E+ + DP++T + ++ G +D + M + GV VG RCEVFP Sbjct: 81 CSLEDDSRKLGFYSPYDGCTLHVVDTDPTSLSAQGWLEDTSKVEKYVMSDEAYDRRSGTFRKYKEERRREDPSWTLHRELAQRRGGGSQDAGPEHMAAEASGVGVGDRCEVFP 193
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A5A8E4C2_CAFRO (CAP-Gly domain-containing protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E4C2_CAFRO) HSP 1 Score: 112 bits (280), Expect = 2.280e-27 Identity = 61/120 (50.83%), Postives = 78/120 (65.00%), Query Frame = 1 Query: 7 LADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAK-FQRMQKAQGKEDGDAMPK--DLD--------GVEVGMRCEVFP 333 + DD K LGFY + G RVH+VD DP SLS+ GGLDD+SQV+KYVMS+E+YDKR GTLRAWK+EQLK +P F ++ +A A P+ D+D G+EVG RC + P Sbjct: 95 MLDDDKMLGFYGMTHGHRVHVVDHDPMSLSRGGGLDDVSQVKKYVMSEEDYDKREGTLRAWKREQLKKNPHFKYSDALPASGRAAAXXXXXAGPRAPDVDFEDDTLVEGIEVGARCSIRP 214
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A2R5GFJ6_9STRA (Tubulin-folding cofactor B n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GFJ6_9STRA) HSP 1 Score: 108 bits (270), Expect = 1.090e-26 Identity = 53/111 (47.75%), Postives = 73/111 (65.77%), Query Frame = 1 Query: 1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDGDAMPKDLDGVEVGMRCEVFP 333 C L DD+K LGFY + G +HI+DTDP+S SKDGGL+++ VEKYVMSDE+Y+KR ++RA+KK+ + DP FT R + K KD++G VG RC++ P Sbjct: 83 CELDDDTKMLGFYGVATGMNIHIIDTDPYSFSKDGGLENVDLVEKYVMSDEDYNKRENSIRAYKKKMREKDPYFTLLPENRREP---KNKNPPTEKDVEGFTVGDRCQIQP 190
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A7S3DMQ9_9EUKA (Hypothetical protein n=2 Tax=Palpitomonas bilix TaxID=652834 RepID=A0A7S3DMQ9_9EUKA) HSP 1 Score: 107 bits (267), Expect = 4.660e-26 Identity = 55/119 (46.22%), Postives = 77/119 (64.71%), Query Frame = 1 Query: 7 LADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDGDAMPKDL----------DGVEVGMRCEVFP 333 L DD+K LGFYS +G +H++D DPHSLSK GGLDD+SQV+KY MSDEEYDKR T + +K++ + DPT+T +QK K +G +P+ + + + VG RC+V+P Sbjct: 103 LNDDTKMLGFYSPQNGYYIHVIDNDPHSLSKKGGLDDVSQVKKYTMSDEEYDKRENTYKKYKEKMRETDPTWT------LQKEIAKRNGQPIPETINDPEFQKNEAEAIAVGKRCQVYP 215
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A482S1V0_9ARCH (CAP-Gly domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1V0_9ARCH) HSP 1 Score: 106 bits (265), Expect = 4.910e-26 Identity = 54/111 (48.65%), Postives = 75/111 (67.57%), Query Frame = 1 Query: 1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDGDAMPKDLDGVEVGMRCEVFP 333 C + D+SK LGFYS+ GD +H++D DP+SLS++GGL D+S VEKY +SDE YDKR GT+R + +EQ K +P F A K + G P+ ++G++VG RCEV P Sbjct: 74 CEMPDESKMLGFYSVVSGDEIHVIDNDPYSLSRNGGLTDVSLVEKYKISDEAYDKRKGTVRDYIREQRKQNPNFKSAPV--TPKDPSEIPG---PESVEGIKVGDRCEVMP 179
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A7S3GWA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GWA4_9STRA) HSP 1 Score: 103 bits (256), Expect = 2.810e-25 Identity = 56/120 (46.67%), Postives = 76/120 (63.33%), Query Frame = 1 Query: 1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKE-DGDAM--------PKDLDGVEVGMRCEVFP 333 C +ADD++ LGFYS+ G +H++DTDP SLS+ GGL D+S +EKY M DE Y+KRAGT+R + +EQ K DPTF K + GK+ GD P+ + G+E GMR +V P Sbjct: 85 CEMADDNRMLGFYSVKSGMEIHVIDTDPFSLSRGGGLTDVSLIEKYKMDDETYEKRAGTMREFIREQRKKDPTF---KLGQKNTTMGKQPSGDVTVTTQLPPGPESVAGIEGGMRGQVTP 201
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A830HEM0_9CHLO (CAP-Gly domain-containing protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HEM0_9CHLO) HSP 1 Score: 104 bits (259), Expect = 6.790e-25 Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 1 Query: 1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQG-----KEDGDAMPKDLDGVEVGMRCEVFP 333 CV+ D ++ LGFYS DG +H++DTDPHSLS GGL+D+SQVEKYVMSD++Y+ R T R +K+++L+ DPT+T K M + +G D DA ++ V RCEV P Sbjct: 99 CVMDDGARPLGFYSPLDGYVLHVIDTDPHSLSARGGLEDVSQVEKYVMSDDDYNNRENTYRKFKEDKLRKDPTWTLQK--EMAERRGVPVPEPTDPDAYVEEAKACTVDSRCEVSP 212
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A7S2W9K5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W9K5_9STRA) HSP 1 Score: 104 bits (259), Expect = 7.040e-25 Identity = 53/122 (43.44%), Postives = 76/122 (62.30%), Query Frame = 1 Query: 1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQ-----------KAQGKEDGDAMPKDLDGVEVGMRCEVFP 333 C L+DDS+ LGFYS+ G +HI+D DP+SLS+ GGL+D S +EKY MS++ YDKR GT+R W +EQ DP + K M A+ +E+ P+ ++G+++G RCEV P Sbjct: 94 CELSDDSRMLGFYSVESGMTIHIIDEDPYSLSRGGGLEDTSLIEKYRMSEDTYDKRKGTVREWIREQKAKDPNWKPPKANMMTGNPWARQDPQAAAEPEEEVPVGPETVEGIKIGDRCEVMP 215
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A7S2RYS7_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RYS7_9STRA) HSP 1 Score: 103 bits (258), Expect = 1.300e-24 Identity = 51/111 (45.95%), Postives = 72/111 (64.86%), Query Frame = 1 Query: 1 CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKEDGDAMPKDLDGVEVGMRCEVFP 333 CV+ DD+K LG+Y + G +HIVD DPHS SKDGGL++++ VEKYVMSDE+Y+KR LR +KK+ + DP +TF R + G K + G ++G RC++ P Sbjct: 119 CVMDDDTKMLGYYGVTSGMNIHIVDMDPHSYSKDGGLENVNLVEKYVMSDEDYEKRENALRNYKKKMREKDPYWTFLPENRREPKNKNPPGPDSVKVISG-QIGERCQIQP 228
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Match: A0A5B8MIV5_9CHLO (Tubulin folding cofactor B n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MIV5_9CHLO) HSP 1 Score: 101 bits (252), Expect = 5.980e-24 Identity = 54/116 (46.55%), Postives = 77/116 (66.38%), Query Frame = 1 Query: 4 VLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDEEYDKRAGTLRAWKKEQLKADPTFTFAKFQRMQKAQGKE------DGDAMPKDLDGVEVGMRCEVFP 333 LADD+ LGFYS DG +H++D DP+S S DG L+D+S+V+KY +S+E+Y+ R T R +K+++LK DPT+T K + K GKE D + ++ GVEVG RCEV+P Sbjct: 90 TLADDNTVLGFYSPQDGFTLHVIDIDPNSSSADGWLEDVSKVQKYEISEEDYNARENTYRKFKEQKLKEDPTWTLQK--EIAKRSGKEVKEAVNDPEFQAEEAKGVEVGNRCEVYP 203 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90358.20949.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90358.20949.1 >prot_M-pyrifera_M_contig90358.20949.1 ID=prot_M-pyrifera_M_contig90358.20949.1|Name=mRNA_M-pyrifera_M_contig90358.20949.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=111bp CVLADDSKKLGFYSLCDGDRVHIVDTDPHSLSKDGGLDDLSQVEKYVMSDback to top mRNA from alignment at M-pyrifera_M_contig90358:2..514- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90358.20949.1 ID=mRNA_M-pyrifera_M_contig90358.20949.1|Name=mRNA_M-pyrifera_M_contig90358.20949.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=513bp|location=Sequence derived from alignment at M-pyrifera_M_contig90358:2..514- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90358:2..514- >mRNA_M-pyrifera_M_contig90358.20949.1 ID=mRNA_M-pyrifera_M_contig90358.20949.1|Name=mRNA_M-pyrifera_M_contig90358.20949.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=666bp|location=Sequence derived from alignment at M-pyrifera_M_contig90358:2..514- (Macrocystis pyrifera P11B4 male)back to top |