mRNA_M-pyrifera_M_contig90350.20944.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90350.20944.1
Unique NamemRNA_M-pyrifera_M_contig90350.20944.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: A0A3D4UMX5_9BACT (S9 family peptidase (Fragment) n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A3D4UMX5_9BACT)

HSP 1 Score: 453 bits (1165), Expect = 3.170e-156
Identity = 211/251 (84.06%), Postives = 225/251 (89.64%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEELS 753
            PSSHTEQ IY R+Y PD+ KF G RPIV+FSHGAGY Q ANY W  Y REHMFHTIL NEGFIV+ PDFRAS+GYGRDWRTAIYR+MG+PELEDFKD IDW VE+  GD DRVGIYGGSYGGFMTLMAMFLEPETYK GAALRSVTDW HYNHGYTSNILNTP+IDPEAF+ SSPI HAEGLQG LLMLHG+LDDNVVAQDIIRLSQRLIELEKENWELA+HPIEPHGYKEPSSWLDQ+RRIHKLF  EL+
Sbjct:  259 PSSHTEQPIYTRVYLPDSEKFPGKRPIVVFSHGAGYLQFANYEWKNYTREHMFHTILNNEGFIVLAPDFRASSGYGRDWRTAIYRKMGFPELEDFKDTIDWAVEHHNGDPDRVGIYGGSYGGFMTLMAMFLEPETYKAGAALRSVTDWRHYNHGYTSNILNTPDIDPEAFDISSPINHAEGLQGHLLMLHGLLDDNVVAQDIIRLSQRLIELEKENWELALHPIEPHGYKEPSSWLDQLRRIHKLFNAELN 509          
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: A0A2D9CLH3_9BACT (S9 family peptidase n=2 Tax=Phycisphaerae TaxID=666505 RepID=A0A2D9CLH3_9BACT)

HSP 1 Score: 453 bits (1165), Expect = 6.220e-151
Identity = 211/251 (84.06%), Postives = 225/251 (89.64%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEELS 753
            PSSHTEQ IY R+Y PD+ KF G RPIV+FSHGAGY Q ANY W  Y REHMFHTIL NEGFIV+ PDFRAS+GYGRDWRTAIYR+MG+PELEDFKD IDW VE+  GD DRVGIYGGSYGGFMTLMAMFLEPETYK GAALRSVTDW HYNHGYTSNILNTP+IDPEAF+ SSPI HAEGLQG LLMLHG+LDDNVVAQDIIRLSQRLIELEKENWELA+HPIEPHGYKEPSSWLDQ+RRIHKLF  EL+
Sbjct:  674 PSSHTEQPIYTRVYLPDSEKFPGKRPIVVFSHGAGYLQFANYEWKNYTREHMFHTILNNEGFIVLAPDFRASSGYGRDWRTAIYRKMGFPELEDFKDTIDWAVEHHNGDPDRVGIYGGSYGGFMTLMAMFLEPETYKAGAALRSVTDWRHYNHGYTSNILNTPDIDPEAFDISSPINHAEGLQGHLLMLHGLLDDNVVAQDIIRLSQRLIELEKENWELALHPIEPHGYKEPSSWLDQLRRIHKLFNAELN 924          
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: A0A2A4RD98_9BACT (S9 family peptidase n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RD98_9BACT)

HSP 1 Score: 442 bits (1138), Expect = 6.880e-148
Identity = 205/250 (82.00%), Postives = 225/250 (90.00%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEEL 750
            PS+HT+Q IY RLY PD++KF+GPRP+VLFSHGAGY Q ANY WSYYKREHM+HTIL N GFIVI PDFRAS+GYGRDWRTAIYR+MGYPELEDFKD I++ VEN   D + VGIYGGSYGGFMTLMAMFLEPETYK GAALRSVTDWAHYNHGYTSNILNTP+IDPEA++ SSPI HAEGLQG LLMLHG+ D+NVVAQDIIRL+QRLIELEK+NWELA+ PIEPHGY EPSSWLDQMRRIHKLF  EL
Sbjct:  588 PSTHTDQPIYTRLYLPDSAKFEGPRPLVLFSHGAGYLQHANYQWSYYKREHMYHTILTNLGFIVIAPDFRASSGYGRDWRTAIYRKMGYPELEDFKDAINYAVENHNADPNNVGIYGGSYGGFMTLMAMFLEPETYKAGAALRSVTDWAHYNHGYTSNILNTPDIDPEAYKISSPINHAEGLQGHLLMLHGLQDNNVVAQDIIRLTQRLIELEKQNWELALAPIEPHGYHEPSSWLDQMRRIHKLFITEL 837          
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: A0A3M2CTR2_9BACT (S9 family peptidase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CTR2_9BACT)

HSP 1 Score: 390 bits (1002), Expect = 3.530e-127
Identity = 179/250 (71.60%), Postives = 209/250 (83.60%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEEL 750
            PSSH++Q I  R+YRPD  +F GP PIV+F+HGAGY Q A+  WS Y REHMFHT+L   G +VI PDFRAS GYGRDWRTAIYR+MGYPELEDF DCI +  E+  GD +RVGIYGGSYGGFMTLMAMFL P+ Y  GAALRSVTDW HYNHGYTSNIL+TP+IDPE F++ SPI  AE L+GRLLM HGMLDDNVVAQDIIRL+QRLIELEK +WELA++P+EPHG++EPSSW D+ RRI++LF +EL
Sbjct:  618 PSSHSDQPIRTRVYRPDPERFPGPHPIVIFAHGAGYLQWAHNGWSNYFREHMFHTLLNERGILVIGPDFRASEGYGRDWRTAIYRRMGYPELEDFDDCIAYAAEHLNGDPERVGIYGGSYGGFMTLMAMFLRPDVYDAGAALRSVTDWRHYNHGYTSNILDTPQIDPEPFDRCSPINFAEHLEGRLLMCHGMLDDNVVAQDIIRLTQRLIELEKHDWELALYPVEPHGFREPSSWYDEYRRIYELFEDEL 867          
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: A0A7C5WKK5_9BACT (S9 family peptidase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7C5WKK5_9BACT)

HSP 1 Score: 372 bits (956), Expect = 2.340e-123
Identity = 177/253 (69.96%), Postives = 202/253 (79.84%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPR--PIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEELS 753
            PS+H    I  R+Y  D +   G R  P+VLFSHGAGY Q     WSYY REH+FHT+LA +G+IVI PDFRASAGYGRDWRTAIYR+MG PELEDF DC+ W  E    D  RVGIYGGSYGGFMTLMAMF  P  Y+CGAALR VTDWAHYNHGYTSNILNTPEIDPEAFE+SSPIEHA+GL G LLM HG++DDNVVAQD IRL+QRLIEL+KENWE+ ++P+EPHG++EP SWLD+ RRI KLF   L+
Sbjct:  351 PSTHGAGPIPCRVYE-DTTIPAGTRGKPVVLFSHGAGYTQHVYNGWSYYFREHLFHTLLARKGYIVIAPDFRASAGYGRDWRTAIYRRMGTPELEDFDDCLAWLGETRGADLSRVGIYGGSYGGFMTLMAMFNRPGVYRCGAALRPVTDWAHYNHGYTSNILNTPEIDPEAFERSSPIEHADGLAGALLMCHGLVDDNVVAQDTIRLAQRLIELKKENWEMMLYPVEPHGFREPESWLDEYRRILKLFETNLN 602          
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: UPI001F0D6173 (prolyl oligopeptidase family serine peptidase n=1 Tax=Wenzhouxiangella sp. XN79A TaxID=2724193 RepID=UPI001F0D6173)

HSP 1 Score: 350 bits (897), Expect = 2.910e-115
Identity = 163/254 (64.17%), Postives = 193/254 (75.98%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEELSDDA 762
            PS H +  I+ + Y P    F+GPRP+VLF HGAGY Q+ ++ + YY RE MFH +L   G+ V+  D+RAS GYGRDWRTAIYRQMG PELED  D +DW VEN  GD  RVG+YGGSYGGFMT MAMF  PET+  GA+LR VTDWAHYNH YTSNILNTPE+DPEA+ +SSPIE  +GL G LL+ HGMLDDNV  +D IRL QRLIELEK++WELA +P+EPHGY  P SWLDQ RRI KLF + + D+A
Sbjct:  283 PSRHVDAPIWTKFY-PARGDFEGPRPVVLFVHGAGYTQNTHHRFPYYFREQMFHNLLTERGYHVLDMDYRASRGYGRDWRTAIYRQMGTPELEDLIDGVDWVVENHDGDPARVGVYGGSYGGFMTFMAMFKAPETFAAGASLRPVTDWAHYNHFYTSNILNTPEVDPEAYRRSSPIEFVDGLAGDLLISHGMLDDNVFWKDSIRLVQRLIELEKQDWELASYPLEPHGYVHPESWLDQYRRILKLFEQSIGDNA 535          
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: A0A2A5CZH6_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A2A5CZH6_9BACT)

HSP 1 Score: 347 bits (891), Expect = 1.550e-113
Identity = 163/252 (64.68%), Postives = 195/252 (77.38%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEELSD 756
            PSSH  + I+ R+Y P  +  D  RP V+F HGAG  Q+A+  WS Y RE MFH++L   G++V+  D+RASAGYGRDWRTAIYRQMG+PELED +D + W VEN   D DR+G YGGSYGGF+TLMA+F +P+ + CGAALR VTDWAHYNHGYTSNILNTP IDP AFE SSPIE AEGL   L++LHGM D+NV  QD +RL QRLIELEKE+WELA++PIE HG++EPSSWLD+ RRI KLF   L D
Sbjct:  357 PSSHVNEPIHSRVYMPKTASTD-KRPAVVFIHGAGXLQNAHQGWSGYFREFMFHSLLTQRGYVVLDMDYRASAGYGRDWRTAIYRQMGHPELEDLEDGVKWLVENRNVDPDRIGTYGGSYGGFLTLMALFTKPDLFACGAALRPVTDWAHYNHGYTSNILNTPTIDPSAFETSSPIEFAEGLTKPLIILHGMQDNNVFFQDSVRLVQRLIELEKEDWELAVYPIEAHGFREPSSWLDEYRRILKLFETHLKD 607          
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: A0A2E6RHP2_9GAMM (S9 family peptidase n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E6RHP2_9GAMM)

HSP 1 Score: 351 bits (901), Expect = 3.760e-113
Identity = 164/253 (64.82%), Postives = 192/253 (75.89%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEELSDD 759
            PSSH E+ I+ + Y P    F GPRP+V+F HGAGY Q+ ++ + YY RE MFH +L   G+ VI  D+RAS GYGRDWRTAIYRQMG PELED  D + W VEN   D  RVG+YGGSYGGFMT MAMF  PE +  GA+LR VTDWAHYNHGYTSNILNTPE+DPEA+ +SSPIE  EGLQG LL+ HGMLDDNV  +D +RL+QRLIELEK++WELA +P+EPHGY+ P SWLDQ RRI KLF   L  D
Sbjct:  522 PSSHVERPIWTKFY-PARGDFQGPRPVVVFVHGAGYTQNTHHRFPYYFREQMFHNLLTERGYHVIDMDYRASRGYGRDWRTAIYRQMGTPELEDLVDGVAWLVENHDADPARVGVYGGSYGGFMTFMAMFNAPEVFAAGASLRPVTDWAHYNHGYTSNILNTPEVDPEAYRRSSPIEFVEGLQGDLLISHGMLDDNVFYKDSVRLAQRLIELEKQDWELASYPLEPHGYEHPESWLDQYRRILKLFENSLGHD 773          
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: A0A845BZ54_9BACT (S9 family peptidase n=2 Tax=Holophagales bacterium TaxID=2478486 RepID=A0A845BZ54_9BACT)

HSP 1 Score: 343 bits (880), Expect = 1.780e-109
Identity = 164/251 (65.34%), Postives = 195/251 (77.69%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEELS 753
            PSSH ++ ++ RLY P  S  + PRP V+F HGAGY Q+A+  WS Y RE MFHT+LA  G++V+  DFRASAGYGRDWRTAIYRQMG PE+ED  D I++ V     D DR+G+YGGSYGGF+T MAMF  PE +  GAALR VTDWAHYNHGYTSNILNTPE+DPEA+E+SSPIE AEGLQ  LL+  GMLDDNV+ QD +RL QRLIEL KE+WELA++P E HG+ EPSSWLD+ RRI KLF   L+
Sbjct:  579 PSSHADRPVHARLYLPPDST-EAPRPAVVFVHGAGYLQNAHQGWSSYFREFMFHTLLARRGYVVLDMDFRASAGYGRDWRTAIYRQMGTPEVEDLADGIEYLVAGHGVDRDRIGVYGGSYGGFVTFMAMFRRPELFAAGAALRPVTDWAHYNHGYTSNILNTPELDPEAYERSSPIEFAEGLQKPLLICTGMLDDNVLFQDSVRLVQRLIELGKEDWELAVYPAEAHGFVEPSSWLDEYRRILKLFETHLN 828          
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Match: A0A6B0W8S0_9BACT (Alpha/beta fold hydrolase n=4 Tax=Holophagales bacterium TaxID=2478486 RepID=A0A6B0W8S0_9BACT)

HSP 1 Score: 343 bits (880), Expect = 1.990e-109
Identity = 165/250 (66.00%), Postives = 194/250 (77.60%), Query Frame = 1
Query:    1 PSSHTEQSIYMRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANEGFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDADRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNILNTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLIELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEEL 750
            PSSH E+ I+ RLY P     + PRP V+F HGAGY Q+A+  WS Y RE MFHT+LA  G++V+  DFRASAGYGRDWRTAIYRQMG PE+ED  D ID+ V  +  D +R+G+YGGSYGGF+T MAMF  PE +  GAALR VTDWAHYNHGYTSNILNTPE+DPEA+E+SSPIE AEGLQ  LL+  GMLDDNV+ QD +RL QRLIEL KE+WELA++P E HG+ EPSSWLD+ RRI KLF   L
Sbjct:  584 PSSHVERPIHARLYLPPGPA-ETPRPAVVFVHGAGYLQNAHQGWSSYFREFMFHTLLARRGYVVLDMDFRASAGYGRDWRTAIYRQMGTPEVEDLADGIDYLVAEQGVDRERIGVYGGSYGGFVTFMAMFRHPELFAAGAALRPVTDWAHYNHGYTSNILNTPELDPEAYERSSPIEFAEGLQKPLLICTGMLDDNVLFQDSVRLVQRLIELGKEDWELAVYPAEAHGFVEPSSWLDEYRRILKLFETHL 832          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90350.20944.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D4UMX5_9BACT3.170e-15684.06S9 family peptidase (Fragment) n=1 Tax=Phycisphaer... [more]
A0A2D9CLH3_9BACT6.220e-15184.06S9 family peptidase n=2 Tax=Phycisphaerae TaxID=66... [more]
A0A2A4RD98_9BACT6.880e-14882.00S9 family peptidase n=1 Tax=bacterium TaxID=186922... [more]
A0A3M2CTR2_9BACT3.530e-12771.60S9 family peptidase n=1 Tax=Planctomycetes bacteri... [more]
A0A7C5WKK5_9BACT2.340e-12369.96S9 family peptidase n=1 Tax=Phycisphaerales bacter... [more]
UPI001F0D61732.910e-11564.17prolyl oligopeptidase family serine peptidase n=1 ... [more]
A0A2A5CZH6_9BACT1.550e-11364.68Uncharacterized protein n=1 Tax=Candidatus Hydroge... [more]
A0A2E6RHP2_9GAMM3.760e-11364.82S9 family peptidase n=1 Tax=Xanthomonadales bacter... [more]
A0A845BZ54_9BACT1.780e-10965.34S9 family peptidase n=2 Tax=Holophagales bacterium... [more]
A0A6B0W8S0_9BACT1.990e-10966.00Alpha/beta fold hydrolase n=4 Tax=Holophagales bac... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90350contigM-pyrifera_M_contig90350:2..775 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score329.3
Seed ortholog evalue1.5e-87
Seed eggNOG ortholog247639.MGP2080_06882
Preferred nameptpA_1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.COG1506 Dipeptidyl aminopeptidases acylaminoacyl-peptidases
EggNOG OGs1J8S8@118884,1N4G0@1224,1RRIM@1236,COG0823@1,COG0823@2,COG1506@1,COG1506@2
COG Functional cat.EU
Best tax levelunclassified Gammaproteobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size774
Cds size744
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816815.2293687-UTR-M-pyrifera_M_contig90350:1..311622816815.2293687-UTR-M-pyrifera_M_contig90350:1..31Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90350 2..31 +
1692278194.7456908-UTR-M-pyrifera_M_contig90350:1..311692278194.7456908-UTR-M-pyrifera_M_contig90350:1..31Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig90350 2..31 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816815.241874-CDS-M-pyrifera_M_contig90350:31..7751622816815.241874-CDS-M-pyrifera_M_contig90350:31..775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90350 32..775 +
1692278194.7569294-CDS-M-pyrifera_M_contig90350:31..7751692278194.7569294-CDS-M-pyrifera_M_contig90350:31..775Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90350 32..775 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90350.20944.1prot_M-pyrifera_M_contig90350.20944.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90350 32..775 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90350.20944.1

>prot_M-pyrifera_M_contig90350.20944.1 ID=prot_M-pyrifera_M_contig90350.20944.1|Name=mRNA_M-pyrifera_M_contig90350.20944.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=248bp
MRLYRPDASKFDGPRPIVLFSHGAGYRQDANYTWSYYKREHMFHTILANE
GFIVITPDFRASAGYGRDWRTAIYRQMGYPELEDFKDCIDWTVENERGDA
DRVGIYGGSYGGFMTLMAMFLEPETYKCGAALRSVTDWAHYNHGYTSNIL
NTPEIDPEAFEKSSPIEHAEGLQGRLLMLHGMLDDNVVAQDIIRLSQRLI
ELEKENWELAMHPIEPHGYKEPSSWLDQMRRIHKLFTEELSDDAHKD*
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mRNA from alignment at M-pyrifera_M_contig90350:2..775+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90350.20944.1 ID=mRNA_M-pyrifera_M_contig90350.20944.1|Name=mRNA_M-pyrifera_M_contig90350.20944.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=774bp|location=Sequence derived from alignment at M-pyrifera_M_contig90350:2..775+ (Macrocystis pyrifera P11B4 male)
CCGTCGTCGCATACAGAGCAGTCGATCTACATGCGTCTGTATCGTCCCGA TGCGAGCAAGTTCGATGGGCCGCGCCCGATCGTGCTCTTCTCGCACGGTG CGGGATATCGGCAGGACGCGAACTATACATGGTCATACTACAAACGCGAG CACATGTTCCACACGATTCTCGCGAATGAGGGATTCATTGTGATCACGCC GGATTTTCGTGCGAGTGCAGGATACGGTCGCGACTGGCGCACCGCGATCT ATCGACAGATGGGATATCCCGAACTCGAAGACTTCAAAGACTGTATCGAT TGGACAGTCGAGAACGAGCGCGGCGATGCAGATCGTGTCGGGATCTACGG CGGATCGTACGGCGGCTTCATGACACTGATGGCAATGTTCCTCGAACCTG AAACATACAAGTGCGGCGCTGCGCTGCGATCTGTGACTGATTGGGCGCAT TACAATCACGGCTATACATCCAACATCCTCAACACGCCGGAGATCGATCC AGAAGCGTTCGAGAAATCATCCCCGATCGAGCACGCAGAGGGATTGCAGG GACGCTTGCTCATGCTGCACGGCATGCTCGATGACAATGTCGTTGCGCAA GACATCATCCGCTTATCACAGCGATTGATCGAGTTGGAGAAGGAAAACTG GGAGCTCGCGATGCATCCGATCGAGCCGCACGGATACAAGGAGCCCAGCA GTTGGCTCGATCAGATGCGCCGCATCCACAAGCTGTTCACTGAAGAACTC AGCGACGATGCGCACAAGGATTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90350:2..775+

>mRNA_M-pyrifera_M_contig90350.20944.1 ID=mRNA_M-pyrifera_M_contig90350.20944.1|Name=mRNA_M-pyrifera_M_contig90350.20944.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1488bp|location=Sequence derived from alignment at M-pyrifera_M_contig90350:2..775+ (Macrocystis pyrifera P11B4 male)
ATGCGTCTGTATCGTCCCGATGCGAGCAAGTTCGATGGGCCGCGCCCGAT
CGTGCTCTTCTCGCACGGTGCGGGATATCGGCAGGACGCGAACTATACAT
GGTCATACTACAAACGCGAGCACATGTTCCACACGATTCTCGCGAATGAG
GGATTCATTGTGATCACGCCGGATTTTCGTGCGAGTGCAGGATACGGTCG
CGACTGGCGCACCGCGATCTATCGACAGATGGGATATCCCGAACTCGAAG
ACTTCAAAGACTGTATCGATTGGACAGTCGAGAACGAGCGCGGCGATGCA
GATCGTGTCGGGATCTACGGCGGATCGTACGGCGGCTTCATGACACTGAT
GGCAATGTTCCTCGAACCTGAAACATACAAGTGCGGCGCTGCGCTGCGAT
CTGTGACTGATTGGGCGCATTACAATCACGGCTATACATCCAACATCCTC
AACACGCCGGAGATCGATCCAGAAGCGTTCGAGAAATCATCCCCGATCGA
GCACGCAGAGGGATTGCAGGGACGCTTGCTCATGCTGCACGGCATGCTCG
ATGACAATGTCGTTGCGCAAGACATCATCCGCTTATCACAGCGATTGATC
GAGTTGGAGAAGGAAAACTGGGAGCTCGCGATGCATCCGATCGAGCCGCA
CGGATACAAGGAGCCCAGCAGTTGGCTCGATCAGATGCGCCGCATCCACA
AGCTGTTCACTGAAGAACTCAGCGACGATGCGCACAAGGATTGAATGCGT
CTGTATCGTCCCGATGCGAGCAAGTTCGATGGGCCGCGCCCGATCGTGCT
CTTCTCGCACGGTGCGGGATATCGGCAGGACGCGAACTATACATGGTCAT
ACTACAAACGCGAGCACATGTTCCACACGATTCTCGCGAATGAGGGATTC
ATTGTGATCACGCCGGATTTTCGTGCGAGTGCAGGATACGGTCGCGACTG
GCGCACCGCGATCTATCGACAGATGGGATATCCCGAACTCGAAGACTTCA
AAGACTGTATCGATTGGACAGTCGAGAACGAGCGCGGCGATGCAGATCGT
GTCGGGATCTACGGCGGATCGTACGGCGGCTTCATGACACTGATGGCAAT
GTTCCTCGAACCTGAAACATACAAGTGCGGCGCTGCGCTGCGATCTGTGA
CTGATTGGGCGCATTACAATCACGGCTATACATCCAACATCCTCAACACG
CCGGAGATCGATCCAGAAGCGTTCGAGAAATCATCCCCGATCGAGCACGC
AGAGGGATTGCAGGGACGCTTGCTCATGCTGCACGGCATGCTCGATGACA
ATGTCGTTGCGCAAGACATCATCCGCTTATCACAGCGATTGATCGAGTTG
GAGAAGGAAAACTGGGAGCTCGCGATGCATCCGATCGAGCCGCACGGATA
CAAGGAGCCCAGCAGTTGGCTCGATCAGATGCGCCGCATCCACAAGCTGT
TCACTGAAGAACTCAGCGACGATGCGCACAAGGATTGA
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