prot_M-pyrifera_M_contig9029.20936.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9029.20936.1
Unique Nameprot_M-pyrifera_M_contig9029.20936.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length221
Homology
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: D8LQN5_ECTSI (Similar to putative chromatin structure regulator n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN5_ECTSI)

HSP 1 Score: 343 bits (881), Expect = 5.090e-117
Identity = 159/195 (81.54%), Postives = 180/195 (92.31%), Query Frame = 0
Query:   25 MHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLATPKYIGGTTGDVEKLLLEQKEQSPNRIPYMMCKKGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFKLNAQQLGRSSRTGRK 219
            MHPQFKN THLEAE++LKE SD+RGEA+IRPSSKGPDHLSLTWMW+EGEFMHTDI+E+GKQ GSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLA+ KY  GT+ +VEK L +QK+ +PNRIPY+MC++G PG++NLMYLP  TVRK VVE++PEGY+MSKRCFKTLPELFKWFKLNAQQLGRSSRT RK
Sbjct:    1 MHPQFKNFTHLEAEEFLKEMSDTRGEAVIRPSSKGPDHLSLTWMWVEGEFMHTDIKELGKQPGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLASDKYNPGTSAEVEKTLQKQKDDAPNRIPYLMCRRGVPGYVNLMYLPAHTVRKIVVEVSPEGYVMSKRCFKTLPELFKWFKLNAQQLGRSSRTSRK 195          
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: A0A7M7PAU0_STRPU (Transcription elongation factor spt6 n=3 Tax=Echinacea TaxID=7674 RepID=A0A7M7PAU0_STRPU)

HSP 1 Score: 151 bits (382), Expect = 1.620e-38
Identity = 82/198 (41.41%), Postives = 117/198 (59.09%), Query Frame = 0
Query:   13 AARAGVRHPRSIMHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLATPKYI---GGTTGDVEKLLLEQKEQSPNRIPYMMCK-KGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFKLN 206
            AA +     R I+HP F+N+T+ +AE+ ++E+    G+ +IRPSSKG DHL++TW   +G + H D+QE GK     L   LKIG EE+EDLDEII+R +      V D+ +   Y    GG+   +EK L  +K+++PNRIPY MC  +  PG   L Y P    R   V ITP+GY    + F T+  L +WFK++
Sbjct: 1453 AAASSTYVKRVIVHPSFQNITYKQAEKVMRESDV--GDVIIRPSSKGADHLTVTWKVEDGVYQHIDVQEEGKDNDFSLGSTLKIGEEEFEDLDEIIARHIQPMAAFVRDVTSHKYYHAVEGGSKELMEKYLQTEKKKTPNRIPYFMCLCQNYPGKFLLSYQPRSKGRHEYVSITPDGYKFRGQTFTTINSLHRWFKVH 1648          
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: UPI0018CFF9F7 (transcription elongation factor SPT6 n=1 Tax=Plutella xylostella TaxID=51655 RepID=UPI0018CFF9F7)

HSP 1 Score: 151 bits (381), Expect = 2.180e-38
Identity = 79/186 (42.47%), Postives = 111/186 (59.68%), Query Frame = 0
Query:   22 RSIMHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLATPKY--IGGTTGDVEKLLLEQKEQSPNRIPYMM-CKKGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFK 204
            R I+HP F N++  EAE+ +   +  +GE ++RPSSKG DHL++TW   EG + H D++E GK+    L   L IGG E+EDLDEII+R V+    L  DL++   Y  +GG     E++L E K ++PN+I Y++   K  PG   L YLP    R   V +TP+GY   +R F +L  L KWFK
Sbjct: 1327 RVIVHPAFHNISFAEAEKLMDNMA--QGEVIVRPSSKGSDHLTVTWKVAEGIYQHIDVREEGKENAFSLGKSLWIGGSEFEDLDEIIARHVTPMAGLARDLVSFKYYKPLGGIRDKAEEILKEDKAKNPNKIHYIISAAKNYPGRFLLSYLPSSRCRHEYVSVTPDGYKFRQRMFDSLGALLKWFK 1510          
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: A0A2A4IUW9_HELVI (Uncharacterized protein n=1 Tax=Heliothis virescens TaxID=7102 RepID=A0A2A4IUW9_HELVI)

HSP 1 Score: 145 bits (367), Expect = 2.390e-37
Identity = 77/186 (41.40%), Postives = 112/186 (60.22%), Query Frame = 0
Query:   22 RSIMHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLATPKY--IGGTTGDVEKLLLEQKEQSPNRIPYMM-CKKGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFK 204
            R I+HP F N++  EAE+ + + +  +GE ++RPSSKG DHL++TW   +G + H D++E GK+    L   L I G E+EDLDEII+R V+    L  DL+A   Y  +GG     E++L E+K ++PN+I Y++   K  PG   L YLP   V    V +TP+GY   +R F +L  L +WFK
Sbjct:  165 RVIVHPAFHNISFAEAEKLMDKMA--QGEVIVRPSSKGSDHLTVTWKVADGIYQHIDVREEGKENAFSLGRSLWIQGSEFEDLDEIIARHVTPMAGLARDLIAYKYYKPLGGMRDKAEEILKEEKARNPNKIHYVISAAKNYPGRFLLSYLPRARVTHEYVSVTPDGYRYRQRNFDSLAGLLRWFK 348          
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: UPI0006C95778 (transcription elongation factor SPT6 isoform X1 n=2 Tax=Copidosoma floridanum TaxID=29053 RepID=UPI0006C95778)

HSP 1 Score: 148 bits (373), Expect = 2.570e-37
Identity = 78/187 (41.71%), Postives = 111/187 (59.36%), Query Frame = 0
Query:   22 RSIMHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLATPKYIGGTTGDVEK---LLLEQKEQSPNRIPYMM-CKKGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFK 204
            R I+HP F+N+T+ +AE+ ++  +  +GEA+IRPSSKG DHL++TW   EG   H D++E GK+    L   L IG EE+EDLDEII+R ++       +LL    Y G   G  EK   LL EQK+++P  IPY++   K  PG   L YLP    R   + +TP+G+      F  + +LF+WFK
Sbjct: 1332 RVIIHPSFRNITYADAEKLMQ--TMQQGEAIIRPSSKGDDHLTVTWKVTEGIHQHIDVREEGKENKYSLGRSLWIGNEEFEDLDEIIARHINPMAAYATELLDFKYYKGSIMGSKEKSEELLKEQKKENPGGIPYVVSAAKNYPGKFMLSYLPRTRCRHEYISVTPDGFRFRTNTFSRVSDLFRWFK 1516          
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: A0A1B6MV82_9HEMI (SH2 domain-containing protein (Fragment) n=2 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6MV82_9HEMI)

HSP 1 Score: 139 bits (349), Expect = 7.520e-37
Identity = 74/187 (39.57%), Postives = 109/187 (58.29%), Query Frame = 0
Query:   22 RSIMHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLATPKYI---GGTTGDVEKLLLEQKEQSPNRIPYMMC-KKGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFK 204
            R I+HP F N++ +EAE+ +   +  +GE +IRPSSKG DHL++TW   +G + H D++E GK+    L   L IG EE+EDLDEII+R V+       DL +   Y    GG     E+ L E+K+++P +I Y++   K  PG   L YLP    +  ++ +TPEG+    + F T+   FKWFK
Sbjct:   50 RVIVHPAFHNISFVEAEKIM--VNMEQGECIIRPSSKGADHLTVTWKVADGIYQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAHARDLFSFRYYKDTEGGLKDKAEEFLKEEKKKNPQKIHYIISVSKNYPGKFLLSYLPRNRCKHELITVTPEGFRFRGQTFDTVGMCFKWFK 234          
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: UPI001F9BC97C (Uncharacterized protein n=1 Tax=Spodoptera exigua TaxID=7107 RepID=UPI001F9BC97C)

HSP 1 Score: 146 bits (369), Expect = 8.790e-37
Identity = 76/186 (40.86%), Postives = 111/186 (59.68%), Query Frame = 0
Query:   22 RSIMHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLATPKY--IGGTTGDVEKLLLEQKEQSPNRIPYMM-CKKGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFK 204
            R I+HP F N++  EAE+ +++    +GE ++RPSSKG DHL++TW   +G + H D++E GK+    L   L I G E+EDLDEII+R V+    L  DL+    Y  +GG     E++L E+K ++PN+I Y++   K  PG   L YLP        V +TP+GY   +R F +LP L +WFK
Sbjct: 1224 RVIVHPAFHNISFAEAEKLMEKMG--QGEVIVRPSSKGSDHLTVTWKVADGIYQHIDVREEGKENAFSLGRSLWIQGSEFEDLDEIIARHVTPMAGLARDLIGYKYYKPLGGMRDKAEEILKEEKARNPNKIHYVISAAKNYPGRFLLSYLPRARCTHEYVSVTPDGYKYRQRTFDSLPGLLRWFK 1407          
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: UPI001CF25431 (transcription elongation factor SPT6-like n=2 Tax=Acropora TaxID=6127 RepID=UPI001CF25431)

HSP 1 Score: 146 bits (369), Expect = 8.810e-37
Identity = 83/204 (40.69%), Postives = 114/204 (55.88%), Query Frame = 0
Query:    8 KGDSSAARAGVRHP----RSIMHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLATPKY--IGGTTGDVEKLLLEQKEQSPNRIPYMMCK-KGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFK 204
            K +  AA+     P    R I+HP FKN++  EAE+ L E    +GE ++RPSSKG DHL++TW   EG + H D++E GK+    L   L I  EE+EDLDEII+R V        ++L    Y  + G    +E++LL +K ++P RIPY++   K  PG   L YLP    R   V +TP+G+    R   TL  LFKWFK
Sbjct: 1274 KKEEEAAKKKANRPKYVKRVIVHPSFKNISFKEAERLLAEME--QGECIVRPSSKGADHLTVTWKVDEGVYQHVDVREEGKENAFSLGRSLWIDSEEFEDLDEIIARHVQPMASFAREILNHKNYRAVDGNKTKLEEILLAEKRKAPQRIPYLLSTTKDFPGKFFLGYLPRVKARVEYVSVTPDGFRYRGRVHATLNGLFKWFK 1475          
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: UPI0008408D01 (transcription elongation factor SPT6-like n=1 Tax=Ceratina calcarata TaxID=156304 RepID=UPI0008408D01)

HSP 1 Score: 145 bits (367), Expect = 1.640e-36
Identity = 78/187 (41.71%), Postives = 111/187 (59.36%), Query Frame = 0
Query:   22 RSIMHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSACNDLVNDLLATPKY---IGGTTGDVEKLLLEQKEQSPNRIPYMM-CKKGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFK 204
            R I+HP F N++  EAE+ ++     +GEA+IRPSSKG DHL++TW   +  + H DI+E GK+    L   L IG EE+EDLDEII+R ++  +   ++LL    Y   + G     E++L EQK+Q+P  IPY++   K  PG   L YLP    R   V +TPEG+    + F  + ELF+WFK
Sbjct: 1316 RVIIHPSFHNVSFAEAEKLMQNVK--QGEAIIRPSSKGSDHLTVTWKVTDNIYQHIDIREEGKENTFSLGRSLWIGSEEFEDLDEIIARHINPMSAYASELLDFKYYKLNVEGVKEKAEEILKEQKKQNPGGIPYIVSAAKNYPGKFLLSYLPRTRCRHEYVTVTPEGFRFRSQMFSKVNELFRWFK 1500          
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Match: A0A8J2JMM3_9HEXA (Hypothetical protein n=1 Tax=Allacma fusca TaxID=39272 RepID=A0A8J2JMM3_9HEXA)

HSP 1 Score: 145 bits (367), Expect = 1.650e-36
Identity = 77/188 (40.96%), Postives = 116/188 (61.70%), Query Frame = 0
Query:   22 RSIMHPQFKNLTHLEAEQYLKETSDSRGEALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEEYEDLDEIISRRVSA----CNDLVNDLLATPKYIGGTTGDVEKLLLEQKEQSPNRIPYMM-CKKGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELFKWFK 204
            R I+HP FKN++  E+E+ +++    +GE ++RPSSKG DHL++TW   +G + H D++E GK+    L   L IG EE+EDLDEII+R V+     C D++N    T  + GG     E+ LLE+K+++ N+I YM+   K  PG   + YLP   V   ++ ITPEGY   ++ F +L ++ KWFK
Sbjct: 1413 RVIVHPSFKNISFRESEKLMEQMD--QGEVIVRPSSKGADHLTVTWKVCDGIYQHIDVREEGKENAFSLGQSLWIGKEEFEDLDEIIARHVNPMAGYCRDIMNYKYHTTAF-GGVRQKAEEYLLEEKKKNANKIHYMLHATKEFPGRFYISYLPRNKVVHELITITPEGYRFRQQNFDSLNQVLKWFK 1597          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9029.20936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQN5_ECTSI5.090e-11781.54Similar to putative chromatin structure regulator ... [more]
A0A7M7PAU0_STRPU1.620e-3841.41Transcription elongation factor spt6 n=3 Tax=Echin... [more]
UPI0018CFF9F72.180e-3842.47transcription elongation factor SPT6 n=1 Tax=Plute... [more]
A0A2A4IUW9_HELVI2.390e-3741.40Uncharacterized protein n=1 Tax=Heliothis virescen... [more]
UPI0006C957782.570e-3741.71transcription elongation factor SPT6 isoform X1 n=... [more]
A0A1B6MV82_9HEMI7.520e-3739.57SH2 domain-containing protein (Fragment) n=2 Tax=G... [more]
UPI001F9BC97C8.790e-3740.86Uncharacterized protein n=1 Tax=Spodoptera exigua ... [more]
UPI001CF254318.810e-3740.69transcription elongation factor SPT6-like n=2 Tax=... [more]
UPI0008408D011.640e-3641.71transcription elongation factor SPT6-like n=1 Tax=... [more]
A0A8J2JMM3_9HEXA1.650e-3640.96Hypothetical protein n=1 Tax=Allacma fusca TaxID=3... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR035420Spt6, SH2 domainPFAMPF14633SH2_2coord: 19..205
e-value: 5.8E-54
score: 182.8
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 14..120
e-value: 2.0E-29
score: 103.5
IPR036860SH2 domain superfamilyGENE3D3.30.505.10coord: 121..213
e-value: 4.5E-7
score: 31.6
IPR036860SH2 domain superfamilySUPERFAMILY55550SH2 domaincoord: 29..109
IPR017072Transcription elongation factor Spt6PANTHERPTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6coord: 14..208
IPR000980SH2 domainPROSITEPS50001SH2coord: 24..127
score: 9.159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9029contigM-pyrifera_M_contig9029:6842..10486 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9029.20936.1mRNA_M-pyrifera_M_contig9029.20936.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9029 6842..10486 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9029.20936.1 ID=prot_M-pyrifera_M_contig9029.20936.1|Name=mRNA_M-pyrifera_M_contig9029.20936.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=221bp
GGGRGGGKGDSSAARAGVRHPRSIMHPQFKNLTHLEAEQYLKETSDSRGE
ALIRPSSKGPDHLSLTWMWIEGEFMHTDIQEIGKQRGSMLAPRLKIGGEE
YEDLDEIISRRVSACNDLVNDLLATPKYIGGTTGDVEKLLLEQKEQSPNR
IPYMMCKKGPPGFINLMYLPGRTVRKTVVEITPEGYLMSKRCFKTLPELF
KWFKLNAQQLGRSSRTGRKV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR035420Spt6_SH2
IPR036860SH2_dom_sf
IPR017072TF_Spt6
IPR000980SH2