prot_M-pyrifera_M_contig9029.20935.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig9029.20935.1
Unique Nameprot_M-pyrifera_M_contig9029.20935.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length230
Homology
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: D8LQN4_ECTSI (GTB1 RNA binding / hydrolase, acting on ester bonds, also similar to transcription elogantion facto n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQN4_ECTSI)

HSP 1 Score: 384 bits (987), Expect = 9.900e-121
Identity = 193/231 (83.55%), Postives = 209/231 (90.48%), Query Frame = 0
Query:    1 LQVDDDYFPIVESAMDDSREALQRFCQQDPTA-DPRMPPMNLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEP-GESRGFAASGWNRPHTLPRLDDKFD 229
            +QV+DDYFPIVESAMDDSREALQR CQQ  +  DPRMPP NLNDSVNQLDL+AYADEL+RQGEGKRA QLDSIVEEIRYPYRDRRMPYS PGEDELFEWLTGETD TLREGVLVPVR+M+HNDAGVRVRLEGGPGLFGFVP DYVTDDVLP DPITGQ+ +LK VVKENQLMEAAI+KVDKGR+ELKLSLRKSDT  +PD WD P G +R F ASGWNRP +LPRLD+KF+
Sbjct: 1308 VQVEDDYFPIVESAMDDSREALQRLCQQGESGVDPRMPPNNLNDSVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQKADLKGVVKENQLMEAAIIKVDKGRFELKLSLRKSDTMPDPDKWDAPLGATRVFGASGWNRPASLPRLDEKFN 1538          
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A6H5L9M6_9PHAE (S1 motif domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L9M6_9PHAE)

HSP 1 Score: 254 bits (649), Expect = 1.740e-78
Identity = 135/173 (78.03%), Postives = 143/173 (82.66%), Query Frame = 0
Query:   41 LNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYR--------------DRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPD 199
            L+  VNQLDL+AYADEL+RQGEGKRA QLDSIVEEIRYPYR              DRRMPYS PGEDELFEWLTGETD TLREGVLVPVR+M+HNDAGVRVRLEGGPGLFGFVP DYVTDDVLP DPITGQ      VVKENQLMEAAI+KVDK R+ELKLSLRKSDT  +PD
Sbjct:  349 LDVQVNQLDLTAYADELQRQGEGKRAQQLDSIVEEIRYPYRHGNDEMINQMVVHVDRRMPYSTPGEDELFEWLTGETDATLREGVLVPVRIMRHNDAGVRVRLEGGPGLFGFVPGDYVTDDVLPPDPITGQG-----VVKENQLMEAAIIKVDKARFELKLSLRKSDTMPDPD 516          
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A836C842_9STRA (S1 motif domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C842_9STRA)

HSP 1 Score: 171 bits (432), Expect = 4.080e-45
Identity = 94/218 (43.12%), Postives = 129/218 (59.17%), Query Frame = 0
Query:   13 SAMDDSREALQRFCQQDPTADPRMPPMNLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEG-GPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEPGESRGFAASGWNRPHTLPRLDDKFD 229
            S MDDSRE L+    +DP   P  P   L D + +LDL  +A ELERQG GKR +QL+++ +EIR+PYR+RR P+    +D++FEW+TGE D TLR G++V   V  H   GVR  +EG    L GF+P D + DD LP D       +L  +   N +  A I  + K R+E++LSLR+SDTQ+NP  W           + W RP +LP +D +FD
Sbjct:  482 SIMDDSREVLRATLDRDPDWRPENPESELKDKLEELDLVEFAGELERQGLGKRRMQLEAVKDEIRFPYRERRRPFQRASDDDVFEWITGEDDATLRPGMVVTCSVSGHTRGGVRATVEGLSRALLGFIPMDKLQDDPLPPD------ADLALMFPRNSIRSAVIADIRKPRFEVQLSLRRSDTQQNPAAW----------GTQWRRPMSLPPIDREFD 683          
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: K0RC99_THAOC (S1 motif domain-containing protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RC99_THAOC)

HSP 1 Score: 94.4 bits (233), Expect = 1.570e-18
Identity = 65/198 (32.83%), Postives = 100/198 (50.51%), Query Frame = 0
Query:   33 DPRM-PPMNLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEPGESRGFAASGWNRPHTLPRLDDKFD 229
            DP++ PP +  D + +LD+ A+AD +E+ G GK   QL     E+R PY D R P   P    LF+ LTGETD +L  G  V  +V+K+ND G +++LEG   + GF+P   + DD +          +   +V+   ++ A I +V      + LSL++ D ++               +S W RP +L  LD  FD
Sbjct:  688 DPKLLPPESWRDKIEELDIEAFADMIEQNGSGKWLTQLTMTKWELRMPYEDPRKPMEPPQGARLFKLLTGETDASLCPGKHVTGKVIKNNDFGSQIKLEGD--VPGFIPLRNLADDHVE---------SADDIVQVGTVVNAIITQVKMDHMCVDLSLKREDFKKK--------------SSEWERPASLAPLDPYFD 860          
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A7S2P3B4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2P3B4_9STRA)

HSP 1 Score: 92.8 bits (229), Expect = 5.210e-18
Identity = 64/194 (32.99%), Postives = 97/194 (50.00%), Query Frame = 0
Query:   36 MPPMNLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEPGESRGFAASGWNRPHTLPRLDDKFD 229
            +P     D V +LDL  +A+ +++ G GK    L+ +  E R P++D R P   P  + LF  LTGETD TL  G  V  +VMK+ D G +V+LEG   + GF+P   + DD +          + + +V+   ++ A I +V      + LSL+K D ++               +S W RP +LP LDD FD
Sbjct:  688 VPTERWRDKVEELDLETFAEMIQQSGLGKWLSHLNMVKWEYRLPFQDPRKPMVPPTGETLFRLLTGETDATLCPGKEVTGKVMKNGDFGSQVKLEGD--VPGFIPLRNLADDHVE---------SAEDIVQVGTVVTALITQVKMEHMCVDLSLKKEDFKKK--------------SSEWERPQSLPPLDDHFD 856          
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A433PG63_9FUNG (Transcription elongation factor Spt6 n=2 Tax=Endogone sp. FLAS-F59071 TaxID=2340872 RepID=A0A433PG63_9FUNG)

HSP 1 Score: 90.1 bits (222), Expect = 4.680e-17
Identity = 50/157 (31.85%), Postives = 91/157 (57.96%), Query Frame = 0
Query:   40 NLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQR-GNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQ 195
            N  + +N+L L  YA++L R+ +  +   L+ I +E++YPY+D+R P+  P   + F+ ++GET +TLREG++VPV + K        RL+ G             D V+ ID ++ +R  N+ + +  + +    ++K+D+ RY ++LS R+SDT+
Sbjct: 1089 NYPEKLNELMLEDYAEQLYRETKMHKRQTLEQIKQELQYPYKDQRRPFQKPNIMQTFQMISGETPQTLREGLIVPVMITKTKGKWANGRLDSG------------LDAVIGIDHVSDERISNVDEKLHVSDIKNCKVIKIDRERYLVELSSRESDTR 1233          
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A3B4XSJ0_SERLL (Transcription elongation factor spt6 n=1 Tax=Seriola lalandi dorsalis TaxID=1841481 RepID=A0A3B4XSJ0_SERLL)

HSP 1 Score: 87.4 bits (215), Expect = 3.970e-16
Identity = 58/171 (33.92%), Postives = 87/171 (50.88%), Query Frame = 0
Query:   45 VNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAG--------VRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDEPGES 207
            +  LDL A+A+ELERQG G + + L  I  E+   Y+D R+PY VP  +E+F  LT ET ET   G      V  H D+G        VR RL+ G  + GF+P  +++D V+          + ++ VK    +   IMK+D  ++ + L+ R SD     + W  P +S
Sbjct: 1061 LKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVPYRVPNTEEVFNLLTKETPETFYIGNTHCTEVWNHFDSGSCPGQAIGVRSRLDNG--VQGFIPTKFLSDKVVK---------HPEERVKVGMTVHCRIMKIDIEKFSVDLTCRTSDLMDKANEWKLPKDS 1220          
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A8K1CHS1_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHS1_PYTOL)

HSP 1 Score: 87.0 bits (214), Expect = 5.360e-16
Identity = 50/111 (45.05%), Postives = 73/111 (65.77%), Query Frame = 0
Query:   41 LNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAG--VRVRLEGG--PGLFGFVPADYVTDD 147
            + D++++LDL AYA  LE+Q +G + L L+ I  E+RYPY D+R PY +P E+ELF  L+GE  +T +EG++VP  ++ H   G  VRVRL+ G    L   +  DY+TDD
Sbjct: 1076 IQDALSELDLPAYASRLEQQKKGPKLLTLEYIKRELRYPYFDKRHPYQMPREEELFVLLSGENKDTFQEGIIVPCTLL-HMAGGEFVRVRLQNGMRATLKKDLLPDYLTDD 1185          
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: Q55A48_DICDI (Transcription elongation factor spt6 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q55A48_DICDI)

HSP 1 Score: 86.3 bits (212), Expect = 9.970e-16
Identity = 56/159 (35.22%), Postives = 86/159 (54.09%), Query Frame = 0
Query:   45 VNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDMWDE 203
            +++LDL  +AD +E   +      L  I +E+  P+ D R PY  P  D +FEWLTGET+++LR G LV V  ++  D  V+ RL+ G  L G +P D ++D+        G+  +L + V  N      +M VDK ++ + LS + SD   NP  W+E
Sbjct: 1099 LDRLDLDGFADIIESHEDRPARKLLYFIKKELTNPFADIRHPYEEPSADTIFEWLTGETNQSLRRGTLVTVTTIRTFDNSVKCRLDNG--LEGSIPTDCISDN--------GETKSLGRGVTIN----CRVMGVDKYQFTVSLSCKPSDL--NPSFWEE 1241          
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Match: A0A3N4M1T4_9PEZI (Transcription elongation factor Spt6 (Fragment) n=1 Tax=Terfezia boudieri ATCC MYA-4762 TaxID=1051890 RepID=A0A3N4M1T4_9PEZI)

HSP 1 Score: 85.5 bits (210), Expect = 1.790e-15
Identity = 57/182 (31.32%), Postives = 95/182 (52.20%), Query Frame = 0
Query:   40 NLNDSVNQLDLSAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLTGETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLPIDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQ----------RNPDMWDEPGESRGFA 211
            N  + VN L L  YA+ELE+    K+   L++I  E+++PY + R  +     + +F  LTGET+ETL EG++VPV V +  D  + VRL+ G  + G VP D + +  + +            V    Q ++A ++ +++  +  +LSLR+SD +          R+P+ WD+  E R  A
Sbjct: 1039 NQENKVNDLILEEYAEELEKTFNQKKRATLETIRAELQHPYEELRKAFKTLSFERIFTMLTGETNETLFEGMVVPVNVRRVADRYISVRLDCG--IDGNVPQDMIDNSGVSVHA----------VYAVGQTVQAKVLSLERKSFFAELSLRESDIRNGLRRFDRQDRDPEEWDDVREERDRA 1208          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig9029.20935.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LQN4_ECTSI9.900e-12183.55GTB1 RNA binding / hydrolase, acting on ester bond... [more]
A0A6H5L9M6_9PHAE1.740e-7878.03S1 motif domain-containing protein n=1 Tax=Ectocar... [more]
A0A836C842_9STRA4.080e-4543.12S1 motif domain-containing protein n=1 Tax=Tribone... [more]
K0RC99_THAOC1.570e-1832.83S1 motif domain-containing protein (Fragment) n=1 ... [more]
A0A7S2P3B4_9STRA5.210e-1832.99Hypothetical protein (Fragment) n=1 Tax=Skeletonem... [more]
A0A433PG63_9FUNG4.680e-1731.85Transcription elongation factor Spt6 n=2 Tax=Endog... [more]
A0A3B4XSJ0_SERLL3.970e-1633.92Transcription elongation factor spt6 n=1 Tax=Serio... [more]
A0A8K1CHS1_PYTOL5.360e-1645.05Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
Q55A48_DICDI9.970e-1635.22Transcription elongation factor spt6 n=1 Tax=Dicty... [more]
A0A3N4M1T4_9PEZI1.790e-1531.32Transcription elongation factor Spt6 (Fragment) n=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022967RNA-binding domain, S1SMARTSM00316S1_6coord: 108..190
e-value: 1.5E-5
score: 34.5
NoneNo IPR availableGENE3D2.40.50.140coord: 87..195
e-value: 3.2E-24
score: 86.8
IPR003029S1 domainPFAMPF00575S1coord: 109..190
e-value: 2.0E-4
score: 21.7
IPR003029S1 domainPROSITEPS50126S1coord: 110..190
score: 12.732
IPR042066Spt6, Death-like domainGENE3D1.10.10.2740coord: 9..83
e-value: 2.0E-5
score: 26.8
IPR017072Transcription elongation factor Spt6PANTHERPTHR10145TRANSCRIPTION ELONGATION FACTOR SPT6coord: 42..200
IPR012340Nucleic acid-binding, OB-foldSUPERFAMILY50249Nucleic acid-binding proteinscoord: 104..196

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig9029contigM-pyrifera_M_contig9029:57..5767 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig9029.20935.1mRNA_M-pyrifera_M_contig9029.20935.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig9029 57..5767 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig9029.20935.1 ID=prot_M-pyrifera_M_contig9029.20935.1|Name=mRNA_M-pyrifera_M_contig9029.20935.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=230bp
LQVDDDYFPIVESAMDDSREALQRFCQQDPTADPRMPPMNLNDSVNQLDL
SAYADELERQGEGKRALQLDSIVEEIRYPYRDRRMPYSVPGEDELFEWLT
GETDETLREGVLVPVRVMKHNDAGVRVRLEGGPGLFGFVPADYVTDDVLP
IDPITGQRGNLKQVVKENQLMEAAIMKVDKGRYELKLSLRKSDTQRNPDM
WDEPGESRGFAASGWNRPHTLPRLDDKFDA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022967S1_dom
IPR003029S1_domain
IPR042066Spt6_death-like
IPR017072TF_Spt6
IPR012340NA-bd_OB-fold