prot_M-pyrifera_M_contig90214.20918.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90214.20918.1
Unique Nameprot_M-pyrifera_M_contig90214.20918.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length113
Homology
BLAST of mRNA_M-pyrifera_M_contig90214.20918.1 vs. uniprot
Match: A0A2D8LXA9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D8LXA9_9ACTN)

HSP 1 Score: 94.7 bits (234), Expect = 4.970e-21
Identity = 55/109 (50.46%), Postives = 68/109 (62.39%), Query Frame = 0
Query:    1 MVAILRNDGSPAALADRCRGWIGAAPGAEQMAERAVMAAIDDWHFDTTSRTTTVVESSDDDITVVDVATDRGRWRVEVETGRAVPTIACGVAGGLPAKPGAEWRVRSIT 109
            M  IL   GSPA +A RCRGW G   G  Q+AERAV   +DDW  D  +R+     + D  + +VDVA    R+ VE+E GRAVPTIAC   GGLPAKPG E+RV  ++
Sbjct:  209 MGRILDRHGSPATVAHRCRGWTGT-DGVGQVAERAVFTMLDDWAVDDLARSVETQPNGDGWLAMVDVA--GRRFGVEIERGRAVPTIACRADGGLPAKPGTEYRVVGVS 314          
BLAST of mRNA_M-pyrifera_M_contig90214.20918.1 vs. uniprot
Match: A0A2E9XBI9_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2E9XBI9_9ACTN)

HSP 1 Score: 63.2 bits (152), Expect = 2.230e-9
Identity = 39/106 (36.79%), Postives = 56/106 (52.83%), Query Frame = 0
Query:    3 AILRNDGSPAALADRCRGWIGAAPGAEQMAERAVMAAIDDWHFDTTSRTTTVVESSDDDITVVDVATDRGRWRVEVETGRAVPTIACGVAGGLPAKPGAEWRVRSI 108
            +I+ + G+       CRGW GA+PG EQ+AERAV+  +  W  +   R   V E       V +VA     W V+++  R VP+I+C   GGLP K   E+ V S+
Sbjct:  210 SIMESSGNALDFDAHCRGWWGASPGPEQIAERAVLTRVG-WALNDLPRNIVVREVPGG--WVAEVAVTGKTWEVKIKKRRVVPSISCRSGGGLPTKLHTEYLVTSV 312          
BLAST of mRNA_M-pyrifera_M_contig90214.20918.1 vs. uniprot
Match: A0A351ENQ2_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351ENQ2_9ACTN)

HSP 1 Score: 53.1 bits (126), Expect = 8.050e-6
Identity = 39/98 (39.80%), Postives = 50/98 (51.02%), Query Frame = 0
Query:   14 LADRCRGWIGAAPGAEQMAERAVMAAIDDWHFDTTSRTTTVVESSDDD-ITVVDVATDRGRWRVEVETGRAVPTIACGVAGGLPAKPGAE--WRVRSI 108
            +++  RGW GA  G  Q+AE AV A      F  T      +E +D    +   V +D   W V V   RA+P+IAC  AGGLPAKPG E  W +  I
Sbjct:  215 VSNHARGWWGAKVGPAQVAECAVRAERAGAGF--TEPHIEPIEGNDGTPASHFRVTSDDTSWDVHVRVKRAIPSIACETAGGLPAKPGREFAWSIERI 310          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90214.20918.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2D8LXA9_9ACTN4.970e-2150.46Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
A0A2E9XBI9_9ACTN2.230e-936.79Uncharacterized protein n=1 Tax=Actinomycetia bact... [more]
A0A351ENQ2_9ACTN8.050e-639.80Uncharacterized protein n=1 Tax=Acidimicrobiaceae ... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90214contigM-pyrifera_M_contig90214:8..346 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90214.20918.1mRNA_M-pyrifera_M_contig90214.20918.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90214 2..346 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90214.20918.1 ID=prot_M-pyrifera_M_contig90214.20918.1|Name=mRNA_M-pyrifera_M_contig90214.20918.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp
MVAILRNDGSPAALADRCRGWIGAAPGAEQMAERAVMAAIDDWHFDTTSR
TTTVVESSDDDITVVDVATDRGRWRVEVETGRAVPTIACGVAGGLPAKPG
AEWRVRSITRAE*
back to top