mRNA_M-pyrifera_M_contig90202.20913.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90202.20913.1
Unique NamemRNA_M-pyrifera_M_contig90202.20913.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: A0A517XJ18_9PLAN (DNA (cytosine-5-)-methyltransferase n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517XJ18_9PLAN)

HSP 1 Score: 516 bits (1328), Expect = 3.110e-180
Identity = 254/265 (95.85%), Postives = 258/265 (97.36%), Query Frame = 1
Query:    1 SVVDTETTGKYGENDPRKCIVACEKYGVPQQRHRVILVGIRSDLGDIKLPPLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLSDLDEELASSIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSGKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            SVVDTE+TGKY ENDPRK IVACEKYG PQQRHRVILVGIRSDLGDI+LPPL  TPAPKVNDVIAGLPRLRSGLSRSR+NGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLSDLDEELAS IIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTD R+GGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSGKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL
Sbjct:  242 SVVDTESTGKYKENDPRKFIVACEKYGAPQQRHRVILVGIRSDLGDIELPPLNSTPAPKVNDVIAGLPRLRSGLSRSRRNGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLSDLDEELASLIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDSRLGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSGKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 506          
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: A0A1C3ETA9_9PLAN (DNA (cytosine-5-)-methyltransferase n=1 Tax=Planctopirus hydrillae TaxID=1841610 RepID=A0A1C3ETA9_9PLAN)

HSP 1 Score: 307 bits (786), Expect = 1.600e-98
Identity = 147/264 (55.68%), Postives = 191/264 (72.35%), Query Frame = 1
Query:    4 VVDTETTGKYGENDPRKCIVACEKYGVPQQRHRVILVGIRSDLGDIKLPPLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLSDLDEELASSIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSGKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            +V       Y E DPR+ IV CE+YGVPQQRHRVILVG+   +G +  PPL  +PAP V  VI  LP+LRSGLSRSR+ G YV   D+ D+W ESI+ Q+G N  +    WL+++D+ELA+ +  T   + +PR+ RGD F+  +  L D  H+L+ + +D R+ GVCNH TR+H+DSDL+RYLF A + +++  SPRL  FP  LLP+H+NA++G F+DRFRVQL N A+TT+TSHISKDGHYFIH DPTQCRSLTVREAARL
Sbjct:  225 IVAAAEASHYPEEDPRRFIVQCEEYGVPQQRHRVILVGLIDTIGAVSPPPLIRSPAPTVKSVIDSLPKLRSGLSRSRQGGKYVTLVDNEDTWWESIRRQVGAN-GHPCPAWLNEIDDELANRLFSTVEQITRPRNGRGDEFLAANGAL-DRTHSLHDFLSDSRLSGVCNHATRAHMDSDLIRYLFCAVFARQHSYSPRLEDFPRGLLPNHQNATTGDFDDRFRVQLANAASTTITSHISKDGHYFIHYDPTQCRSLTVREAARL 486          
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: A0A517QQM1_9PLAN (DNA (cytosine-5-)-methyltransferase n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QQM1_9PLAN)

HSP 1 Score: 272 bits (695), Expect = 6.860e-85
Identity = 137/254 (53.94%), Postives = 167/254 (65.75%), Query Frame = 1
Query:   46 PRKCIVACEKYGVPQQRHRVILVGIRSDLGDIKLPPLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLSDLDE----ELASSIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSGKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            P   +VA E++G+PQ RHRV L+GIR DLGD++LP LTP+PAP V ++I GLP LRSGLSR R +  YV   DS + W ++   Q   +      RWL  +       +   I+   SNL     DRG  F+   K       TL  WY D R+GGVCNH TR H+D+DL RYLFA  Y K  G+SP+L QFPA L P+HKNASSG F+DRFRVQ+  + A+T+TSHISKDGHYFIHPD  QCRSLTVREAARL
Sbjct:  248 PGDFLVASEQHGIPQIRHRVFLIGIREDLGDVELPFLTPSPAPSVAEIIGGLPPLRSGLSRKRVSSRYVNLKDSPELWRQTQIEQTVRSTPEDERRWLKSVSNGTIPSIRDEILSIISNLDSSPEDRGSEFVSW-KTESSLPSTLRDWYLDSRLGGVCNHSTRGHMDTDLARYLFATCYAKVNGVSPKLAQFPADLQPNHKNASSGDFDDRFRVQIAGKPASTITSHISKDGHYFIHPDSAQCRSLTVREAARL 500          
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: A0A5C5VPX8_9PLAN (DNA (cytosine-5-)-methyltransferase n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5VPX8_9PLAN)

HSP 1 Score: 253 bits (646), Expect = 1.730e-77
Identity = 137/269 (50.93%), Postives = 173/269 (64.31%), Query Frame = 1
Query:    4 VVDTETTGKYGENDPRKCIVACEKYGVPQQRHRVILVGIRSDLGDIKLPPLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLSDL-DEELASS--IIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSGK--FNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            +VD   + +  +  P   IVACE++GVPQ+RHRVIL+GIR DLGD+ +P L P+  P V ++I+ LPRLRSGLSR      Y+   D    W E IQ      DS   A WL  L D++ A+   I+ T   L+ P+ DR   FI  +K   DA   L KW  D R+ G CNH++R H+DSDL RY+FAA + + +G SP+LNQFP  LLP H NA   K  F+DRFRVQ+    ATTVTSH+SKDGHYFIH DP+QCRS+TVRE ARL
Sbjct:  229 IVDHSRSRRDQKLLPTDFIVACERFGVPQRRHRVILIGIREDLGDVNVPTLKPSEPPTVREMISTLPRLRSGLSRKFNGKGYIPLKDDPQLWKEVIQHWT--IDSGNDALWLDTLADDDPATHTLIVSTVEKLRIPQKDRRGDFIAAEKTP-DAPAALKKWIVDDRLKGTCNHESRLHMDSDLARYIFAACHAQVHGDSPKLNQFPRRLLPRHANAKDEKLIFDDRFRVQVAGSPATTVTSHLSKDGHYFIHYDPSQCRSMTVREVARL 494          
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: UPI001BDB4668 (DNA cytosine methyltransferase n=1 Tax=Geobacter luticola TaxID=1114878 RepID=UPI001BDB4668)

HSP 1 Score: 232 bits (591), Expect = 1.170e-69
Identity = 123/263 (46.77%), Postives = 161/263 (61.22%), Query Frame = 1
Query:   16 ETTGKYGENDPRKCIVACEKYGVPQQRHRVILVGIRSDLGDIKLPPLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVR--FSDSSDS-WIESIQSQIGLNDSNGSARWLSDLDEELASSIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSGKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            ET        P   IV CEKYG+PQ RHRVIL+G+R DL   +   LTP     ++ V+ GLPRLRSG S+        R    +SSD  WIESI+ +I               D + A  + +  S +K P  DRG  F++    + D    L  WY D R+GG+CNH +R H+ +D+ RY++A+ +   YG SP+L++FP+AL P+HKNA SG FNDRFRVQ   + +TT+T HISKDGHY+IHPD TQCRSLTVREAAR+
Sbjct:  219 ETQNDITALKPEDFIVECEKYGIPQARHRVILLGVREDLDHCRPDILTPKTTVPIDSVLKGLPRLRSGFSKETDGPAIWRQQLRESSDEEWIESIREEI---------------DSQFAEELSRMLSKIKCPLDDRGSEFLKCHAPVSDD---LKWWYEDNRLGGICNHTSRGHMRTDVYRYVYASYFTSFYGSSPKLHEFPSALQPEHKNAKSGHFNDRFRVQAYGRPSTTITCHISKDGHYYIHPDYTQCRSLTVREAARI 463          
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: UPI0001D8F272 (DNA cytosine methyltransferase n=1 Tax=Geobacter sulfurreducens TaxID=35554 RepID=UPI0001D8F272)

HSP 1 Score: 228 bits (581), Expect = 7.590e-69
Identity = 121/262 (46.18%), Postives = 164/262 (62.60%), Query Frame = 1
Query:   22 TGKYGENDPRKCIVACEKYGVPQQRHRVILVGIRSDLGDIKLPPLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLSDL----DEELASSIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSGKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            +G   E  P   IV CEKYG+PQ RHRVIL+GIR+DL  +    L P     ++DVI+ +P+LRSGLSR          +DS+++W ++I   +         RWL  +     +EL   +I+T  +L  P +DRG  ++     +++    L  WY+DY +GGVCNH  R H+  D+ RYLFAA + + +  SP+L  FP  LLPDH NA SG F+DRFRVQ+  + +TT+TSHISKDGHY+IH DP+Q RSLTVREAARL
Sbjct:  158 SGTADELKPEDFIVECEKYGIPQTRHRVILLGIRNDLSHVCPDILEPCDDVTIDDVISEMPKLRSGLSRE---------ADSAEAWQQAITDALDR-------RWLRGVRKKWGDELFEELIETIIDLTLPANDRGSEYVRGSAPVIND---LNWWYSDYMLGGVCNHSARGHITKDVYRYLFAACFARYFEKSPKLRDFPPDLLPDHTNAKSGHFDDRFRVQVKGRPSTTITSHISKDGHYYIHYDPSQARSLTVREAARL 400          
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: A0A7L9BX16_9BACT (DNA (cytosine-5-)-methyltransferase n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A7L9BX16_9BACT)

HSP 1 Score: 219 bits (559), Expect = 1.060e-64
Identity = 120/255 (47.06%), Postives = 162/255 (63.53%), Query Frame = 1
Query:   58 IVACEKYGVPQQRHRVILVGIRSDLGDIKLPPLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLS-----DLDEELASSIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASS----GKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            +V  E++G+PQ RHRVIL+GIR DLGDI  P L    A   + V+ GLPRLRSGLSR+  +G   +++   D W+ +I+ +I        +RW+      D  E +   I  T   L  P +DRG  F+   ++ ++ E    +W+ D R+GG CNH +R+H+D DL RYLFAA Y      SPR+  FP  L P+H+N ++    G F+DRFRVQL N+ ATT+TSHI KDGHY+IHPDP+QCRSLTVREAAR+
Sbjct:  240 VVRAERHGIPQARHRVILLGIREDLGDITPPVLRSQEAVPADAVLQGLPRLRSGLSRA--SGRMSKYAGGQDVWLNAIKREIN-------SRWVDGNHGIDNRETVRELIRSTIKELCVPPADRGAEFVR-GQVTVNYEP---EWFLDDRIGGACNHASRAHMDRDLHRYLFAACYAAVNHRSPRMKDFPPDLQPNHRNVAAAINGGYFDDRFRVQLRNEPATTITSHIHKDGHYYIHPDPSQCRSLTVREAARI 481          
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: UPI00164F5407 (DNA cytosine methyltransferase n=1 Tax=Pontibacter beigongshangensis TaxID=2574733 RepID=UPI00164F5407)

HSP 1 Score: 217 bits (552), Expect = 1.340e-63
Identity = 127/263 (48.29%), Postives = 161/263 (61.22%), Query Frame = 1
Query:   31 YG--ENDPRKCIVACEKYGVPQQRHRVILVGIRSDLGDIKLPP--LTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLSDLDEELASSIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSG----KFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            YG  E   +K I+  E +GVPQ RHRVIL+GIRSD   I +PP  + P P   V DV+ GLP LRSGLS+S+         D   SW+ ++   +    SNGS   L   D  + + I      + +P S  G  F+   +  ++ +    KWY D R+GGV NH +R+H+ SDL RYLFA+++GK  GISP+L  FP  LLP H N   G    KF DRFRVQL  +A+ T+TSHISKDGHY+IHPDP QCRSLTVREAARL
Sbjct:  242 YGNPEYKHKKFIIKAENHGVPQTRHRVILLGIRSD---IDIPPGVIPPRPEIPVADVLTGLPSLRSGLSKSK---------DDFTSWVAALNDIL----SNGS---LDGADAAVINHIRSNFKEIAEPASGTGGDFLPFKETAVNYQE---KWYLDNRIGGVLNHASRTHMQSDLHRYLFASTFGKVKGISPKLCDFPVKLLPAHGNVKQGVEEQKFADRFRVQLAEKASKTITSHISKDGHYYIHPDPAQCRSLTVREAARL 482          
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: A0A7Y9T2D9_9BACT (DNA (cytosine-5-)-methyltransferase n=1 Tax=Edaphobacter lichenicola TaxID=2051959 RepID=A0A7Y9T2D9_9BACT)

HSP 1 Score: 216 bits (549), Expect = 2.150e-63
Identity = 124/272 (45.59%), Postives = 164/272 (60.29%), Query Frame = 1
Query:    1 SVVDTETTGKYGENDPRKCIVACEKYGVPQQRHRVILVGIRSDLGDIKLPPLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQSQIGLNDSNGSARWLSDLDEELASSIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYK--WYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNA-----SSGKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            S+V+ +  GK      R  +V  E +G+PQ RHRVI++GIR DLG      L+ T +  V DVI GLPRLRSG+SRS          DSS++W++ I+S +       +     +++++L+S+I    S + KP++DRG  FI             YK  W+ D R+ GVCNH +R+H++ DL RY +AA Y K    SP L  FP  L+P+H N          F DRFRVQL  + ATTVTSHI+KDGHY+IHPDPTQCRSLTVREAARL
Sbjct:  220 SLVEDDAKGK------RTYVVKAELHGIPQARHRVIIIGIRDDLGAFVPDRLSVTDSVPVKDVIFGLPRLRSGISRSE---------DSSEAWLQLIKSSVNRRWFQTAKGMGPNMEQQLSSAI----SQMTKPQNDRGAEFIP------HPPSVSYKPEWFLDERILGVCNHASRAHIEKDLYRYFYAACYAKAQKTSPVLRDFPKDLIPNHGNVLTAIEEGNLFEDRFRVQLSTKPATTVTSHIAKDGHYYIHPDPTQCRSLTVREAARL 466          
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Match: UPI001FA76C06 (DNA cytosine methyltransferase n=1 Tax=Pontibacter sp. NBU2971 TaxID=2905677 RepID=UPI001FA76C06)

HSP 1 Score: 216 bits (550), Expect = 2.940e-63
Identity = 116/251 (46.22%), Postives = 157/251 (62.55%), Query Frame = 1
Query:   58 IVACEKYGVPQQRHRVILVGIRSDLGDIKLPPLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQS-QIGLNDSNGSARWLSDLDEELASSIIKTASNLKKPRSDRGDVFIETDKLLLDAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRLNQFPAALLPDHKNASSG----KFNDRFRVQLGNQAATTVTSHISKDGHYFIHPDPTQCRSLTVREAARL 795
            ++  EK+G+PQ RHRVIL+GIR D+ D     L       ++ V+ GLP+LRS LS+ +         DS + W E+I + +  L      A  L+++ E+L          +K   +D G  F   ++L ++ E    KW+ D ++GGVCNH++R H+DSDL+RYLF AS+ K Y  SP+L  FP ALLPDHKN   G    KF DRFRVQL ++ + T+TSHISKDGHY+IHPDP QCRSLTVREAAR+
Sbjct:  248 VIQAEKFGIPQTRHRVILLGIRKDI-DFSPDVLDKVAEVPISKVLEGLPKLRSSLSKQK---------DSCEEWAEAISNIEAALMKEKTEAALLAEIKEQL--------KRIKGTAADAGSEFHADERLYINYEK---KWFLDNKLGGVCNHKSRGHMDSDLLRYLFVASFAKVYHRSPKLEDFPVALLPDHKNVREGIDNKKFADRFRVQLWDRPSKTITSHISKDGHYYIHPDPAQCRSLTVREAARI 477          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90202.20913.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517XJ18_9PLAN3.110e-18095.85DNA (cytosine-5-)-methyltransferase n=4 Tax=Gimesi... [more]
A0A1C3ETA9_9PLAN1.600e-9855.68DNA (cytosine-5-)-methyltransferase n=1 Tax=Planct... [more]
A0A517QQM1_9PLAN6.860e-8553.94DNA (cytosine-5-)-methyltransferase n=1 Tax=Thalas... [more]
A0A5C5VPX8_9PLAN1.730e-7750.93DNA (cytosine-5-)-methyltransferase n=1 Tax=Thalas... [more]
UPI001BDB46681.170e-6946.77DNA cytosine methyltransferase n=1 Tax=Geobacter l... [more]
UPI0001D8F2727.590e-6946.18DNA cytosine methyltransferase n=1 Tax=Geobacter s... [more]
A0A7L9BX16_9BACT1.060e-6447.06DNA (cytosine-5-)-methyltransferase n=1 Tax=Planct... [more]
UPI00164F54071.340e-6348.29DNA cytosine methyltransferase n=1 Tax=Pontibacter... [more]
A0A7Y9T2D9_9BACT2.150e-6345.59DNA (cytosine-5-)-methyltransferase n=1 Tax=Edapho... [more]
UPI001FA76C062.940e-6346.22DNA cytosine methyltransferase n=1 Tax=Pontibacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90202contigM-pyrifera_M_contig90202:1..795 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score203.0
Seed ortholog evalue1.8e-49
Seed eggNOG ortholog1244869.H261_20577
Preferred namedcm
KEGG rclassRC00003,RC00332
KEGG koko:K00558
KEGG ReactionR04858
KEGG Pathwayko00270,ko01100,ko05206,map00270,map01100,map05206
KEGG ModuleM00035
Hectar predicted targeting categoryother localisation
EggNOG free text desc.C-5 cytosine-specific DNA methylase
EggNOG OGs1MV9H@1224,2JVQB@204441,2TTY9@28211,COG0270@1,COG0270@2
EC2.1.1.37
COG Functional cat.H
Best tax levelRhodospirillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko02048,ko03032,ko03036
Exons1
Model size795
Cds size795
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816813.7224786-CDS-M-pyrifera_M_contig90202:0..7951622816813.7224786-CDS-M-pyrifera_M_contig90202:0..795Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90202 1..795 -
1692278193.8665195-CDS-M-pyrifera_M_contig90202:0..7951692278193.8665195-CDS-M-pyrifera_M_contig90202:0..795Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90202 1..795 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90202.20913.1prot_M-pyrifera_M_contig90202.20913.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90202 1..795 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90202.20913.1

>prot_M-pyrifera_M_contig90202.20913.1 ID=prot_M-pyrifera_M_contig90202.20913.1|Name=mRNA_M-pyrifera_M_contig90202.20913.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp
SVVDTETTGKYGENDPRKCIVACEKYGVPQQRHRVILVGIRSDLGDIKLP
PLTPTPAPKVNDVIAGLPRLRSGLSRSRKNGNYVRFSDSSDSWIESIQSQ
IGLNDSNGSARWLSDLDEELASSIIKTASNLKKPRSDRGDVFIETDKLLL
DAEHTLYKWYTDYRMGGVCNHQTRSHLDSDLVRYLFAASYGKKYGISPRL
NQFPAALLPDHKNASSGKFNDRFRVQLGNQAATTVTSHISKDGHYFIHPD
PTQCRSLTVREAARL
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mRNA from alignment at M-pyrifera_M_contig90202:1..795-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90202.20913.1 ID=mRNA_M-pyrifera_M_contig90202.20913.1|Name=mRNA_M-pyrifera_M_contig90202.20913.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=795bp|location=Sequence derived from alignment at M-pyrifera_M_contig90202:1..795- (Macrocystis pyrifera P11B4 male)
TCTGTCGTTGATACTGAAACTACCGGGAAGTATGGAGAAAATGATCCCCG CAAGTGTATCGTAGCCTGCGAAAAATATGGCGTCCCACAACAGAGACACC GCGTTATTCTTGTCGGCATTCGCTCTGATCTAGGCGACATCAAATTACCA CCGCTAACCCCAACGCCTGCCCCCAAAGTCAATGATGTGATTGCAGGACT ACCACGGCTACGTAGTGGCTTATCTCGATCAAGAAAGAATGGTAATTATG TCCGTTTTAGTGACAGTTCTGATTCCTGGATTGAATCGATACAGTCACAA ATCGGCCTGAACGATTCAAACGGCTCAGCGCGGTGGTTAAGTGATTTAGA TGAAGAGCTTGCCAGCTCGATAATTAAAACTGCCAGCAACTTGAAGAAAC CCAGGTCTGATCGTGGCGATGTTTTTATTGAAACTGACAAACTATTACTT GACGCGGAACACACACTCTATAAATGGTACACAGATTACAGAATGGGTGG CGTCTGCAATCACCAGACACGTTCCCACTTAGACAGCGATTTAGTAAGGT ACCTCTTTGCTGCCTCGTATGGCAAGAAATATGGTATCTCGCCGCGACTG AATCAGTTTCCAGCAGCACTGCTACCGGATCATAAGAATGCATCCAGCGG GAAATTTAATGATCGATTCCGGGTCCAACTTGGAAATCAAGCTGCCACTA CAGTCACATCACATATATCCAAGGACGGGCATTATTTTATACATCCCGAC CCGACTCAATGCCGCAGTCTGACCGTGCGAGAGGCTGCACGGTTA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90202:1..795-

>mRNA_M-pyrifera_M_contig90202.20913.1 ID=mRNA_M-pyrifera_M_contig90202.20913.1|Name=mRNA_M-pyrifera_M_contig90202.20913.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig90202:1..795- (Macrocystis pyrifera P11B4 male)
TCTGTCGTTGATACTGAAACTACCGGGAAGTATGGAGAAAATGATCCCCG
CAAGTGTATCGTAGCCTGCGAAAAATATGGCGTCCCACAACAGAGACACC
GCGTTATTCTTGTCGGCATTCGCTCTGATCTAGGCGACATCAAATTACCA
CCGCTAACCCCAACGCCTGCCCCCAAAGTCAATGATGTGATTGCAGGACT
ACCACGGCTACGTAGTGGCTTATCTCGATCAAGAAAGAATGGTAATTATG
TCCGTTTTAGTGACAGTTCTGATTCCTGGATTGAATCGATACAGTCACAA
ATCGGCCTGAACGATTCAAACGGCTCAGCGCGGTGGTTAAGTGATTTAGA
TGAAGAGCTTGCCAGCTCGATAATTAAAACTGCCAGCAACTTGAAGAAAC
CCAGGTCTGATCGTGGCGATGTTTTTATTGAAACTGACAAACTATTACTT
GACGCGGAACACACACTCTATAAATGGTACACAGATTACAGAATGGGTGG
CGTCTGCAATCACCAGACACGTTCCCACTTAGACAGCGATTTAGTAAGGT
ACCTCTTTGCTGCCTCGTATGGCAAGAAATATGGTATCTCGCCGCGACTG
AATCAGTTTCCAGCAGCACTGCTACCGGATCATAAGAATGCATCCAGCGG
GAAATTTAATGATCGATTCCGGGTCCAACTTGGAAATCAAGCTGCCACTA
CAGTCACATCACATATATCCAAGGACGGGCATTATTTTATACATCCCGAC
CCGACTCAATGCCGCAGTCTGACCGTGCGAGAGGCTGCACGGTTATCTGT
CGTTGATACTGAAACTACCGGGAAGTATGGAGAAAATGATCCCCGCAAGT
GTATCGTAGCCTGCGAAAAATATGGCGTCCCACAACAGAGACACCGCGTT
ATTCTTGTCGGCATTCGCTCTGATCTAGGCGACATCAAATTACCACCGCT
AACCCCAACGCCTGCCCCCAAAGTCAATGATGTGATTGCAGGACTACCAC
GGCTACGTAGTGGCTTATCTCGATCAAGAAAGAATGGTAATTATGTCCGT
TTTAGTGACAGTTCTGATTCCTGGATTGAATCGATACAGTCACAAATCGG
CCTGAACGATTCAAACGGCTCAGCGCGGTGGTTAAGTGATTTAGATGAAG
AGCTTGCCAGCTCGATAATTAAAACTGCCAGCAACTTGAAGAAACCCAGG
TCTGATCGTGGCGATGTTTTTATTGAAACTGACAAACTATTACTTGACGC
GGAACACACACTCTATAAATGGTACACAGATTACAGAATGGGTGGCGTCT
GCAATCACCAGACACGTTCCCACTTAGACAGCGATTTAGTAAGGTACCTC
TTTGCTGCCTCGTATGGCAAGAAATATGGTATCTCGCCGCGACTGAATCA
GTTTCCAGCAGCACTGCTACCGGATCATAAGAATGCATCCAGCGGGAAAT
TTAATGATCGATTCCGGGTCCAACTTGGAAATCAAGCTGCCACTACAGTC
ACATCACATATATCCAAGGACGGGCATTATTTTATACATCCCGACCCGAC
TCAATGCCGCAGTCTGACCGTGCGAGAGGCTGCACGGTTA
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