mRNA_M-pyrifera_M_contig90201.20912.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90201.20912.1
Unique NamemRNA_M-pyrifera_M_contig90201.20912.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A517PY61_9PLAN (Sodium/glucose cotransporter n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517PY61_9PLAN)

HSP 1 Score: 506 bits (1304), Expect = 9.710e-177
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVLV 792
            RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVLV
Sbjct:  209 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVLV 472          
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A518AFN3_9PLAN (Sodium/glucose cotransporter n=8 Tax=Gimesia TaxID=1649453 RepID=A0A518AFN3_9PLAN)

HSP 1 Score: 488 bits (1257), Expect = 1.050e-169
Identity = 250/264 (94.70%), Postives = 259/264 (98.11%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVLV 792
            RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQW+SNWDTQPFFSTDPATRVTYVGTFLSILIWYVAT+CGDQVSVQRFMSTRDA AAR+SLAIQLTVSVVVSLTLAMVGFALLGYF AFP+EIPAGMELKKDADKFFPHYIANHLP+G+SGCVVSAMFAAAMSSIDSGVNSITAVVMTDF DRFG KPKTERGH+ SARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVP++RPAGVLV
Sbjct:  209 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWNSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATLCGDQVSVQRFMSTRDAVAARKSLAIQLTVSVVVSLTLAMVGFALLGYFTAFPNEIPAGMELKKDADKFFPHYIANHLPIGVSGCVVSAMFAAAMSSIDSGVNSITAVVMTDFFDRFGIKPKTERGHIFSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPYARPAGVLV 472          
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A518IL65_9PLAN (Sodium/glucose cotransporter n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IL65_9PLAN)

HSP 1 Score: 461 bits (1187), Expect = 3.950e-159
Identity = 236/264 (89.39%), Postives = 251/264 (95.08%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVLV 792
            RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPT+W+ NWDTQPFFS DP+TRVTYVGTFLSILIWYVAT CGDQVSVQRFMST+DA  AR+SLAIQLTVSVVVSLTLAMVGFALLGYF  FP+EIPAG++LKKDADKFFPHYIA HLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDF DRF  KP+TERGH+LSARLLA GIG IVV++SS+MGSIPGNITAVTNKTANLLTTPIFCLFFFALF+PF+RPAGVLV
Sbjct:  209 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTEWNENWDTQPFFSFDPSTRVTYVGTFLSILIWYVATSCGDQVSVQRFMSTKDAKTARKSLAIQLTVSVVVSLTLAMVGFALLGYFKEFPNEIPAGIDLKKDADKFFPHYIAYHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFFDRFDRKPQTERGHILSARLLAFGIGAIVVMASSVMGSIPGNITAVTNKTANLLTTPIFCLFFFALFIPFARPAGVLV 472          
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A517VMW9_9PLAN (Sodium/glucose cotransporter n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VMW9_9PLAN)

HSP 1 Score: 457 bits (1175), Expect = 2.790e-157
Identity = 233/264 (88.26%), Postives = 250/264 (94.70%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVLV 792
            RAVVITDLIQTILLFGGALLVIATITYHL GF WFPTQWD +WDTQPFFS DPATRVTYVGTFLSI++WYVAT CGDQVSVQRFMST+DA+AAR+SLA+QL+VSVVVSLTLAMVGFALLGYF  FP+EIPAG++LKKDADKFFPHYIA HLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRF   P+TE+GHV +ARLLA GIG IVVLSSS+MGSIPGNITAVTNKTANLLTTPIFCLFFFALFVP+SRPAGV+V
Sbjct:  209 RAVVITDLIQTILLFGGALLVIATITYHLDGFGWFPTQWDQHWDTQPFFSFDPATRVTYVGTFLSIMVWYVATACGDQVSVQRFMSTKDASAARKSLAVQLSVSVVVSLTLAMVGFALLGYFKEFPNEIPAGIDLKKDADKFFPHYIAYHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFDKSPRTEKGHVFTARLLAFGIGTIVVLSSSVMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPYSRPAGVIV 472          
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A517VNZ7_9PLAN (Sodium/glucose cotransporter n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VNZ7_9PLAN)

HSP 1 Score: 444 bits (1141), Expect = 4.670e-152
Identity = 222/264 (84.09%), Postives = 246/264 (93.18%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVLV 792
            RAVVITD+IQTILLFGGA LVIATI+YHLGG SWFPT+WD+NWDTQPF S DP+TR+TYVGTFLS+LIWY+AT CGDQVSVQRFMST+DA  AR+SLAIQL VSVVVS+TLA+VGFALLGYF  FP+EIPAG++LKKDADKFFPH+IA HLPVG+SGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFG  PKTE+GHVL+AR LALGIG  VVL+SS+MG IPGNITAVTNKTANLLTTPIFCLFFFALF+PF+RP GVL+
Sbjct:  213 RAVVITDVIQTILLFGGAWLVIATISYHLGGISWFPTEWDTNWDTQPFISFDPSTRITYVGTFLSVLIWYIATSCGDQVSVQRFMSTKDAKTARKSLAIQLIVSVVVSITLALVGFALLGYFKEFPNEIPAGIDLKKDADKFFPHFIAYHLPVGVSGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGRTPKTEKGHVLTARFLALGIGAFVVLASSVMGEIPGNITAVTNKTANLLTTPIFCLFFFALFIPFARPMGVLI 476          
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A517VVX6_9PLAN (Sodium/glucose cotransporter n=3 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VVX6_9PLAN)

HSP 1 Score: 380 bits (977), Expect = 5.490e-127
Identity = 191/262 (72.90%), Postives = 228/262 (87.02%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGV 786
            RAVVITDLIQTILLFGGALLVIATI++ +GGFSWFPTQWD+NWDTQP F  +P TRVT+VGT +S++IWY+AT  GDQVSVQRFMST+DA+AARRSLAIQL +S++V +TL++VGF++LGYF AFPSE+PA ++LK++AD  FP+ I+  LP+G+SG VV+AMFAAAMSS+DSGVNSITAVV+TDF DRFG K +TE+ HVL AR LA GIG IVV  SS MG I GNITAVT KTANLLTTPIFCLF FALF+PF++P GV
Sbjct:  234 RAVVITDLIQTILLFGGALLVIATISWKMGGFSWFPTQWDANWDTQPIFDFNPGTRVTFVGTIISVVIWYIATAGGDQVSVQRFMSTKDASAARRSLAIQLCISLIVGITLSLVGFSMLGYFQAFPSELPASIDLKQNADDIFPYVISYQLPIGVSGLVVAAMFAAAMSSVDSGVNSITAVVVTDFFDRFGIKFQTEKSHVLFARCLAFGIGGIVVFCSSFMGLIEGNITAVTGKTANLLTTPIFCLFVFALFIPFAKPLGV 495          
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A2E3ZB59_9PLAN (Sodium-coupled permease n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E3ZB59_9PLAN)

HSP 1 Score: 360 bits (923), Expect = 1.780e-119
Identity = 180/263 (68.44%), Postives = 218/263 (82.89%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVL 789
            RAVVITDL+QT+ LFGGA LVIA +T+ LGGF+WFPTQW  NWDTQP ++ DP TR+T VG+FL+ L+W+V T  GDQ SVQRFM+T+DA AARR+   Q+ VS++V++TL +VG ALLGY  A P ++P GM+LK DAD  FP YI + LPVG+SG V+SAMFAAAMSSIDSGVNSITAVVMTDFLDRFGF+ +TE+G + +A+ LALGIGVIVV  SS MG IPGNITAV++KTANLL +PIFCLFFFA+FVPF+ P GVL
Sbjct:  186 RAVVITDLLQTMFLFGGAWLVIAMVTWDLGGFNWFPTQWHENWDTQPVYTFDPQTRITLVGSFLTTLVWFVCTAGGDQTSVQRFMATKDARAARRAYGTQVLVSIIVTITLGLVGLALLGYAKANPDQLPVGMDLKADADDMFPWYILHRLPVGVSGLVISAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFRSQTEKGQMRTAKYLALGIGVIVVFGSSFMGYIPGNITAVSHKTANLLVSPIFCLFFFAIFVPFATPVGVL 448          
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A517ZG97_9PLAN (Sodium/glucose cotransporter n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZG97_9PLAN)

HSP 1 Score: 360 bits (924), Expect = 2.760e-119
Identity = 183/262 (69.85%), Postives = 214/262 (81.68%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGV 786
            +AVVITD +Q  LL+GGALLV+ T+T++ GGF WFPT W +NWDTQP    DP+TRV+ +G+ LS+  WY+AT  GDQ SVQRFM+T DA AARR+ A QLTV+V+V +TL +VG ALLGYF A P ++PAGM LK++AD  FP YIA HLPVG+SG VV+AMFAAAMSSIDSGVNSITAVVMTD LDRFG KP TE+ HVL AR LA GIG  VV+ SS M  IPGNITA+TNKTANLLTTPIFCLFFFALFVPF++PAGV
Sbjct:  210 QAVVITDAMQCTLLYGGALLVLGTVTWNYGGFGWFPTGWHANWDTQPIIPADPSTRVSMLGSILSVTFWYIATSGGDQTSVQRFMATTDAKAARRAFATQLTVAVIVLVTLGLVGVALLGYFEANPDQLPAGMTLKENADDIFPRYIAYHLPVGVSGLVVAAMFAAAMSSIDSGVNSITAVVMTDLLDRFGRKPDTEKKHVLWARCLAFGIGAAVVIGSSFMDRIPGNITAITNKTANLLTTPIFCLFFFALFVPFAKPAGV 471          
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A2D6LMB9_9BACT (Sodium-coupled permease n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D6LMB9_9BACT)

HSP 1 Score: 355 bits (911), Expect = 4.750e-118
Identity = 186/263 (70.72%), Postives = 209/263 (79.47%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVL 789
            RAVVITDL QTILLFGGALLVI T+T   GGF WFPTQW  NWD QP FS DP+TR+T VG  LS LIWYV T   DQ +VQRFM+TR+  AARRS AI L V   V++TLA+VGFALLG+F A P E+P GM++  +AD  FPHYIA HLP+GISG VV+AMFAAAMSSIDSGVNSITAVV TDFLDRFG +PKTE+GHV  A+LLA  IG IVV+ SS M  IPGNITAVT KT NLL TP+F LFFFALFVPF++P GVL
Sbjct:  159 RAVVITDLFQTILLFGGALLVIITVTIQTGGFDWFPTQWHDNWDRQPVFSFDPSTRITVVGVILSTLIWYVCTAGSDQTTVQRFMATRNVKAARRSYAINLIVGFTVAITLALVGFALLGFFKARPEELPQGMDVINNADFLFPHYIAYHLPMGISGLVVAAMFAAAMSSIDSGVNSITAVVTTDFLDRFGIRPKTEKGHVRVAQLLAFVIGAIVVVGSSFMEHIPGNITAVTQKTTNLLVTPLFGLFFFALFVPFAKPLGVL 421          
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Match: A0A2E8B1X5_9PLAN (Sodium-coupled permease n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8B1X5_9PLAN)

HSP 1 Score: 357 bits (915), Expect = 4.950e-118
Identity = 187/264 (70.83%), Postives = 213/264 (80.68%), Query Frame = 1
Query:    1 RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFSTDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQLTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANHLPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGHVLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFFALFVPFSRPAGVLV 792
            +AVVITDL+QTILLFGGA+LVIAT+TY LGGF WFPT+W SNWD+QP FS DP TRVT +GT L++LIWYV T  GDQ SVQRFM+T D  AARR+ A QL VSV V+L L +VG ALLGY  A    +P+ + +K  AD  FP YIA  LPVGISG VVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFG++PKTE+GHVL+ARLLA  IG IVV+ SS M  +PGNITAVT KT NLL  P+F LFFFALFVPF++P GVLV
Sbjct:  204 QAVVITDLMQTILLFGGAVLVIATVTYELGGFVWFPTEWHSNWDSQPLFSFDPKTRVTVIGTVLTMLIWYVCTAGGDQTSVQRFMATSDVRAARRAYATQLCVSVSVTLMLGLVGLALLGYAEANSDHLPSHVHIKDSADNLFPWYIAYRLPVGISGLVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGWRPKTEKGHVLAARLLAFSIGAIVVVGSSFMEHVPGNITAVTQKTNNLLVAPLFALFFFALFVPFAKPTGVLV 467          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90201.20912.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PY61_9PLAN9.710e-177100.00Sodium/glucose cotransporter n=3 Tax=Gimesia TaxID... [more]
A0A518AFN3_9PLAN1.050e-16994.70Sodium/glucose cotransporter n=8 Tax=Gimesia TaxID... [more]
A0A518IL65_9PLAN3.950e-15989.39Sodium/glucose cotransporter n=2 Tax=Gimesia TaxID... [more]
A0A517VMW9_9PLAN2.790e-15788.26Sodium/glucose cotransporter n=9 Tax=Planctomyceta... [more]
A0A517VNZ7_9PLAN4.670e-15284.09Sodium/glucose cotransporter n=2 Tax=Gimesia aquar... [more]
A0A517VVX6_9PLAN5.490e-12772.90Sodium/glucose cotransporter n=3 Tax=Gimesia aquar... [more]
A0A2E3ZB59_9PLAN1.780e-11968.44Sodium-coupled permease n=1 Tax=Planctomycetaceae ... [more]
A0A517ZG97_9PLAN2.760e-11969.85Sodium/glucose cotransporter n=1 Tax=Maioricimonas... [more]
A0A2D6LMB9_9BACT4.750e-11870.72Sodium-coupled permease n=1 Tax=Phycisphaerae bact... [more]
A0A2E8B1X5_9PLAN4.950e-11870.83Sodium-coupled permease n=1 Tax=Planctomycetaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90201contigM-pyrifera_M_contig90201:3..794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score456.8
Seed ortholog evalue6.7e-126
Seed eggNOG ortholog344747.PM8797T_10824
KEGG koko:K03307
KEGG TC2.A.21
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.Belongs to the sodium solute symporter (SSF) (TC 2.A.21) family
EggNOG OGs2J2BD@203682,COG0591@1,COG0591@2
COG Functional cat.E
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000
Exons1
Model size792
Cds size792
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816813.6901197-CDS-M-pyrifera_M_contig90201:2..7941622816813.6901197-CDS-M-pyrifera_M_contig90201:2..794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90201 3..794 -
1692278193.854214-CDS-M-pyrifera_M_contig90201:2..7941692278193.854214-CDS-M-pyrifera_M_contig90201:2..794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90201 3..794 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90201.20912.1prot_M-pyrifera_M_contig90201.20912.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90201 3..794 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90201.20912.1

>prot_M-pyrifera_M_contig90201.20912.1 ID=prot_M-pyrifera_M_contig90201.20912.1|Name=mRNA_M-pyrifera_M_contig90201.20912.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp
RAVVITDLIQTILLFGGALLVIATITYHLGGFSWFPTQWDSNWDTQPFFS
TDPATRVTYVGTFLSILIWYVATMCGDQVSVQRFMSTRDAAAARRSLAIQ
LTVSVVVSLTLAMVGFALLGYFNAFPSEIPAGMELKKDADKFFPHYIANH
LPVGISGCVVSAMFAAAMSSIDSGVNSITAVVMTDFLDRFGFKPKTERGH
VLSARLLALGIGVIVVLSSSLMGSIPGNITAVTNKTANLLTTPIFCLFFF
ALFVPFSRPAGVLV
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mRNA from alignment at M-pyrifera_M_contig90201:3..794-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90201.20912.1 ID=mRNA_M-pyrifera_M_contig90201.20912.1|Name=mRNA_M-pyrifera_M_contig90201.20912.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig90201:3..794- (Macrocystis pyrifera P11B4 male)
CGTGCTGTAGTCATCACCGATTTAATTCAGACGATTCTATTGTTTGGTGG AGCCTTGCTGGTGATTGCCACTATTACTTACCACCTGGGGGGCTTCAGCT GGTTTCCTACTCAGTGGGACTCTAACTGGGATACACAGCCATTTTTCAGT ACTGACCCGGCGACACGCGTGACTTATGTCGGCACATTTTTGTCAATTCT GATCTGGTATGTCGCTACCATGTGCGGAGACCAGGTTTCCGTGCAGCGAT TCATGTCGACCCGGGATGCAGCGGCGGCACGACGCTCTCTGGCTATCCAA CTGACCGTTTCAGTGGTTGTGTCATTGACTCTGGCGATGGTTGGTTTTGC GTTGCTGGGGTATTTCAATGCGTTTCCGAGTGAAATTCCTGCCGGTATGG AGCTCAAAAAGGATGCGGATAAATTTTTCCCACATTACATTGCAAATCAT CTTCCAGTTGGAATATCAGGGTGTGTTGTGTCAGCGATGTTTGCAGCAGC CATGTCTAGTATCGATTCCGGTGTGAACTCCATCACAGCAGTCGTAATGA CAGACTTTTTGGATCGATTTGGTTTCAAACCTAAAACAGAACGGGGACAT GTTTTATCAGCACGTCTGCTGGCACTGGGAATTGGAGTCATCGTGGTTCT GTCCAGTTCATTGATGGGAAGTATTCCAGGAAACATCACTGCTGTGACGA ATAAAACTGCGAACTTATTGACCACTCCTATATTCTGTCTCTTCTTTTTT GCTCTTTTCGTCCCTTTTTCCAGACCCGCCGGCGTACTGGTC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90201:3..794-

>mRNA_M-pyrifera_M_contig90201.20912.1 ID=mRNA_M-pyrifera_M_contig90201.20912.1|Name=mRNA_M-pyrifera_M_contig90201.20912.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig90201:3..794- (Macrocystis pyrifera P11B4 male)
CGTGCTGTAGTCATCACCGATTTAATTCAGACGATTCTATTGTTTGGTGG
AGCCTTGCTGGTGATTGCCACTATTACTTACCACCTGGGGGGCTTCAGCT
GGTTTCCTACTCAGTGGGACTCTAACTGGGATACACAGCCATTTTTCAGT
ACTGACCCGGCGACACGCGTGACTTATGTCGGCACATTTTTGTCAATTCT
GATCTGGTATGTCGCTACCATGTGCGGAGACCAGGTTTCCGTGCAGCGAT
TCATGTCGACCCGGGATGCAGCGGCGGCACGACGCTCTCTGGCTATCCAA
CTGACCGTTTCAGTGGTTGTGTCATTGACTCTGGCGATGGTTGGTTTTGC
GTTGCTGGGGTATTTCAATGCGTTTCCGAGTGAAATTCCTGCCGGTATGG
AGCTCAAAAAGGATGCGGATAAATTTTTCCCACATTACATTGCAAATCAT
CTTCCAGTTGGAATATCAGGGTGTGTTGTGTCAGCGATGTTTGCAGCAGC
CATGTCTAGTATCGATTCCGGTGTGAACTCCATCACAGCAGTCGTAATGA
CAGACTTTTTGGATCGATTTGGTTTCAAACCTAAAACAGAACGGGGACAT
GTTTTATCAGCACGTCTGCTGGCACTGGGAATTGGAGTCATCGTGGTTCT
GTCCAGTTCATTGATGGGAAGTATTCCAGGAAACATCACTGCTGTGACGA
ATAAAACTGCGAACTTATTGACCACTCCTATATTCTGTCTCTTCTTTTTT
GCTCTTTTCGTCCCTTTTTCCAGACCCGCCGGCGTACTGGTCCGTGCTGT
AGTCATCACCGATTTAATTCAGACGATTCTATTGTTTGGTGGAGCCTTGC
TGGTGATTGCCACTATTACTTACCACCTGGGGGGCTTCAGCTGGTTTCCT
ACTCAGTGGGACTCTAACTGGGATACACAGCCATTTTTCAGTACTGACCC
GGCGACACGCGTGACTTATGTCGGCACATTTTTGTCAATTCTGATCTGGT
ATGTCGCTACCATGTGCGGAGACCAGGTTTCCGTGCAGCGATTCATGTCG
ACCCGGGATGCAGCGGCGGCACGACGCTCTCTGGCTATCCAACTGACCGT
TTCAGTGGTTGTGTCATTGACTCTGGCGATGGTTGGTTTTGCGTTGCTGG
GGTATTTCAATGCGTTTCCGAGTGAAATTCCTGCCGGTATGGAGCTCAAA
AAGGATGCGGATAAATTTTTCCCACATTACATTGCAAATCATCTTCCAGT
TGGAATATCAGGGTGTGTTGTGTCAGCGATGTTTGCAGCAGCCATGTCTA
GTATCGATTCCGGTGTGAACTCCATCACAGCAGTCGTAATGACAGACTTT
TTGGATCGATTTGGTTTCAAACCTAAAACAGAACGGGGACATGTTTTATC
AGCACGTCTGCTGGCACTGGGAATTGGAGTCATCGTGGTTCTGTCCAGTT
CATTGATGGGAAGTATTCCAGGAAACATCACTGCTGTGACGAATAAAACT
GCGAACTTATTGACCACTCCTATATTCTGTCTCTTCTTTTTTGCTCTTTT
CGTCCCTTTTTCCAGACCCGCCGGCGTACTGGTC
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