mRNA_M-pyrifera_M_contig902.20911.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: D7FPR2_ECTSI (NADH dehydrogenase (Ubiquinone) n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPR2_ECTSI) HSP 1 Score: 226 bits (577), Expect = 5.850e-71 Identity = 111/123 (90.24%), Postives = 117/123 (95.12%), Query Frame = 2 Query: 83 MASGLGNYMMKSVGPSRTGAASPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLLNPGAQNDARAVKETFLDKFMAGTS 451 MASGLGNYMMKSVGPSRTG ASPA QLYRAIAKEVPR+LTIYD+DMDFAQAR AIALYFRNNGHLKDPRVVDALVMKGYM+LEETTMQYKQKTHLL+LLNP A NDARAVK+ F+DKFMAGTS Sbjct: 1 MASGLGNYMMKSVGPSRTGTASPATQLYRAIAKEVPRILTIYDVDMDFAQARAAIALYFRNNGHLKDPRVVDALVMKGYMDLEETTMQYKQKTHLLRLLNPSAHNDARAVKDDFMDKFMAGTS 123
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: A0A7S2XV13_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XV13_9STRA) HSP 1 Score: 115 bits (288), Expect = 6.180e-28 Identity = 56/103 (54.37%), Postives = 72/103 (69.90%), Query Frame = 2 Query: 140 AASPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLLNPGAQNDARAVKETFLDKFMAGT 448 A +P QLYR I KE+PRV+ IYD+DM +A AIA +FR + H+KD RV+D LV KGYM +EE TMQYKQKTHL+ +L+P ++ ETF +KF GT Sbjct: 16 AQNPVLQLYRKILKELPRVMIIYDVDMPKEEANAAIAYHFRKSAHVKDERVIDLLVAKGYMHVEEATMQYKQKTHLMSILDPWELSEKFKEPETFEEKFYKGT 118
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: A0A4D9D5Z3_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D5Z3_9STRA) HSP 1 Score: 114 bits (285), Expect = 1.950e-27 Identity = 62/124 (50.00%), Postives = 81/124 (65.32%), Query Frame = 2 Query: 95 LGNYMMKSVGPSRTGAASPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLLNPGAQNDAR-AVKETFLDKFMAGTS*RAE 463 + +YM K P +P QLYR I+KE+PRVLTIYD D+ A+AR + + FR N HL+DP +VD LV KGYMELEET MQ+KQKTHLL+LL + + K TF +KF++ + R E Sbjct: 6 VASYMGKEKTPR-----NPVVQLYRTISKELPRVLTIYDADLAPAEARAQVQVLFRKNAHLQDPVIVDMLVKKGYMELEETLMQWKQKTHLLRLLAADTEAPRKYREKNTFTEKFLSNSFVREE 124
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: A0A835YPN0_9STRA (NADH dehydrogenase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPN0_9STRA) HSP 1 Score: 112 bits (281), Expect = 3.590e-27 Identity = 55/99 (55.56%), Postives = 72/99 (72.73%), Query Frame = 2 Query: 83 MASGLGNYMMKSVGPSRTGAASPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLL 379 +A GL N + KS G G+ +P LYR+I +E+PRVLTIYD+DMD A AR + FR NGHL+DP V+ +V KGYMELEET +Q+KQ+THL++LL Sbjct: 1 VAQGLRNAIFKSGGGFLGGSTAPIMDLYRSICREIPRVLTIYDVDMDPAVARRKVNELFRKNGHLQDPEVIKIVVSKGYMELEETVLQFKQRTHLMRLL 99
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: A0A067CET6_SAPPC (Complex1_LYR_dom domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CET6_SAPPC) HSP 1 Score: 109 bits (273), Expect = 9.580e-26 Identity = 57/105 (54.29%), Postives = 73/105 (69.52%), Query Frame = 2 Query: 146 SPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLLNPGA--QNDARAVKETF---LDKFMAG 445 +PA LYR I K+VPRVLT+YDI+M+ +AR A+ +FR N +KDPRV+D L+ K MELEET MQ+KQK+HLL LL+ G QN+ V + F LD F AG Sbjct: 8 NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKSHLLTLLDSGVKLQNEKNVVYDDFEEGLDNFFAG 112
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: A0A7S1XWB6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XWB6_9STRA) HSP 1 Score: 108 bits (269), Expect = 9.800e-25 Identity = 59/115 (51.30%), Postives = 77/115 (66.96%), Query Frame = 2 Query: 80 TMASGLGNYMMKSVGPSRTGAASPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLLN-------PGAQNDA 403 + + + N G GAA PA QL+R I K + RVLTIYD+++ A+AR+AIA FRNNGH+KDPR+VD LV KGY+ LEET +Q+KQK HL +LL+ PGA +DA Sbjct: 28 SQGAAMSNQAAIRAGAQAIGAA-PARQLFRDICKNLGRVLTIYDLNITTAEARSAIAQRFRNNGHIKDPRIVDVLVAKGYLHLEETLLQHKQKNHLWQLLDNEEGKNFPGAPDDA 141
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: A0A024FTL2_9STRA (Complex1_LYR_dom domain-containing protein n=2 Tax=Albugo TaxID=65356 RepID=A0A024FTL2_9STRA) HSP 1 Score: 107 bits (266), Expect = 1.310e-24 Identity = 58/102 (56.86%), Postives = 71/102 (69.61%), Query Frame = 2 Query: 146 SPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLLNPGAQNDARA--VKETFLDKFMAG 445 SPA LYR I K+VPRVLT+YDI M+ ++AR AI FR N ++KDPRVVD L+ K MELEET +Q+KQK HLL LL G Q A A VK+ + F+AG Sbjct: 16 SPAVTLYRYIIKQVPRVLTLYDITMEPSEARLAIQALFRKNANIKDPRVVDMLITKANMELEETLLQWKQKVHLLTLLETGMQLRASADKVKKDPFENFIAG 117
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: A0A7S1U9Y6_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U9Y6_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.330e-24 Identity = 59/110 (53.64%), Postives = 75/110 (68.18%), Query Frame = 2 Query: 95 LGNYMMKSVGPSRTGAASPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLLN-------PGAQNDA 403 + N G GAA PA QL+R I K + RVLTIYD+++ A+AR+AIA FRNNGH+KDPR+VD LV KGY+ LEET +Q+KQK HL +LL+ PGA +DA Sbjct: 32 MSNQAAIRAGAQAIGAA-PARQLFRDICKNLGRVLTIYDLNITTAEARSAIAQRFRNNGHIKDPRIVDVLVAKGYLHLEETLLQHKQKNHLWQLLDNEEGKNFPGAPDDA 140
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: A0A485LSK2_9STRA (Aste57867_25210 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LSK2_9STRA) HSP 1 Score: 105 bits (263), Expect = 3.180e-24 Identity = 58/110 (52.73%), Postives = 74/110 (67.27%), Query Frame = 2 Query: 131 RTGAASPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLLNPGAQ-NDARAVK----ETFLDKFMAG 445 + G ++PA LYR I K+VPRVLT+YDI M+ AQAR A+ +FR N +KDPRVVD L+ K MELEET MQ+KQK HL LL+ G + ND +A E L+ F +G Sbjct: 9 KLGGSTPAVTLYRQITKQVPRVLTLYDISMEPAQARLAVQAFFRKNADVKDPRVVDMLITKAGMELEETLMQWKQKAHLQTLLDSGVKLNDNKAKVFDEYEEGLEAFFSG 118
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Match: A0A1V9YKZ4_9STRA (Complex1_LYR_dom domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YKZ4_9STRA) HSP 1 Score: 105 bits (262), Expect = 4.430e-24 Identity = 52/100 (52.00%), Postives = 72/100 (72.00%), Query Frame = 2 Query: 146 SPAAQLYRAIAKEVPRVLTIYDIDMDFAQARTAIALYFRNNGHLKDPRVVDALVMKGYMELEETTMQYKQKTHLLKLLNPGAQNDARAVKETFLDKFMAG 445 +PA LYR I K+VPRVLT+YDI+M+ +AR A+ +FR N +KDPRV+D L+ K MELEET MQ+KQK HL+ LL+ GA+ +A K++ D++ G Sbjct: 14 NPAVTLYRHITKQVPRVLTLYDINMEPREARLAVQAFFRKNAEIKDPRVIDMLISKANMELEETLMQWKQKAHLVTLLDSGAK--LQAEKDSVFDEYEDG 111 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig902.20911.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig902.20911.1 >prot_M-pyrifera_M_contig902.20911.1 ID=prot_M-pyrifera_M_contig902.20911.1|Name=mRNA_M-pyrifera_M_contig902.20911.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=124bp MASGLGNYMMKSVGPSRTGAASPAAQLYRAIAKEVPRVLTIYDIDMDFAQback to top mRNA from alignment at M-pyrifera_M_contig902:15427..19437- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig902.20911.1 ID=mRNA_M-pyrifera_M_contig902.20911.1|Name=mRNA_M-pyrifera_M_contig902.20911.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=4011bp|location=Sequence derived from alignment at M-pyrifera_M_contig902:15427..19437- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig902:15427..19437- >mRNA_M-pyrifera_M_contig902.20911.1 ID=mRNA_M-pyrifera_M_contig902.20911.1|Name=mRNA_M-pyrifera_M_contig902.20911.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=744bp|location=Sequence derived from alignment at M-pyrifera_M_contig902:15427..19437- (Macrocystis pyrifera P11B4 male)back to top |