mRNA_M-pyrifera_M_contig90198.20908.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90198.20908.1
Unique NamemRNA_M-pyrifera_M_contig90198.20908.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: D8UDQ2_VOLCA (Inosine triphosphate pyrophosphatase n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8UDQ2_VOLCA)

HSP 1 Score: 134 bits (338), Expect = 1.160e-37
Identity = 64/100 (64.00%), Postives = 82/100 (82.00%), Query Frame = 1 
Query:   16 GHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRALALFKRDLESRAQE 315
            GHDGLN++LAG++DK+A AQCIFA++TGP  EP V+VGRTPGRIVA RGPP+FGWDP+FEPE G   TYAEMDK  K++ISHR R+L L +  L+  +++
Sbjct:   95 GHDGLNKMLAGFDDKTAYAQCIFAYTTGPEVEPIVFVGRTPGRIVAARGPPDFGWDPIFEPE-GFETTYAEMDKETKNKISHRYRSLDLLRSHLQHHSEK 193
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: A0A7S4RKQ8_9DINO (Inosine triphosphate pyrophosphatase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4RKQ8_9DINO)

HSP 1 Score: 134 bits (336), Expect = 4.290e-37
Identity = 70/110 (63.64%), Postives = 84/110 (76.36%), Query Frame = 1 
Query:   16 GHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRALALFKRDL-ESRAQEVADAVAAAA 342
            GH+GLN LLAGYEDKSA AQC FA S GPG E  V+VG+T G+IV  +GP +FGWDPVFEP EGGG+TYAEM K +K+ ISHRGR+L L ++ L E+    V +A AAAA
Sbjct:  101 GHEGLNNLLAGYEDKSAYAQCTFALSAGPGCEVRVFVGKTEGKIVPAKGPKDFGWDPVFEPVEGGGRTYAEMPKNEKNAISHRGRSLELLRKWLIENEDIIVKEATAAAA 210
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: A0A6G1ML38_ORBOL (Inosine triphosphate pyrophosphatase n=6 Tax=Orbiliaceae TaxID=47021 RepID=A0A6G1ML38_ORBOL)

HSP 1 Score: 131 bits (329), Expect = 2.390e-36
Identity = 63/96 (65.62%), Postives = 76/96 (79.17%), Query Frame = 1 
Query:   16 GHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRALALFKRDLES 303
            GH GLN+LLAG+EDKSA A C FAFS GPG+EP ++ GRT G+IV PRGPP+FGWDP+FE E   G+TYAEMDK  K+ +SHRG+AL  FK  LE+
Sbjct:   90 GHSGLNKLLAGFEDKSAEAVCTFAFSEGPGSEPLIFQGRTQGKIVCPRGPPKFGWDPIFEYE---GQTYAEMDKEKKNSVSHRGKALQKFKEFLET 182
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: A0A7S1AIT3_NOCSC (Inosine triphosphate pyrophosphatase n=1 Tax=Noctiluca scintillans TaxID=2966 RepID=A0A7S1AIT3_NOCSC)

HSP 1 Score: 131 bits (329), Expect = 3.940e-36
Identity = 64/86 (74.42%), Postives = 69/86 (80.23%), Query Frame = 1 
Query:   19 HDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRAL 276
            HDGLN+LLAGYEDKSA AQCIFA   GPG E  V+ GRT G+IV PRGP +FGWDPVFEP EG G TYAEM K DK+ ISHRGRAL
Sbjct:  103 HDGLNKLLAGYEDKSAYAQCIFALCAGPGREVRVFDGRTEGKIVQPRGPTDFGWDPVFEPFEGKGLTYAEMAKVDKNAISHRGRAL 188
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: F0XWP7_AURAN (Inosine triphosphate pyrophosphatase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWP7_AURAN)

HSP 1 Score: 131 bits (330), Expect = 4.630e-36
Identity = 70/114 (61.40%), Postives = 78/114 (68.42%), Query Frame = 1 
Query:    1 FFVFAGHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRALALFKRDLESRAQEVADAVAAAA 342
            F    GH GLN LLA Y+DK A AQC+FA   GPGA   ++ GRT G IV  RGP +FGWDPVFEP E GG TYAEMDKA K+ ISHRGRALA  +  L   A E AD +AAAA
Sbjct:  113 FLQKTGHAGLNNLLAAYDDKGAYAQCLFALCAGPGAPVRLFDGRTRGAIVPARGPTDFGWDPVFEPAESGGLTYAEMDKAAKNAISHRGRALAQLRTWLADHAAEFADEIAAAA 226
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: A0A815TPX2_9BILA (Inosine triphosphate pyrophosphatase n=3 Tax=Rotaria TaxID=231623 RepID=A0A815TPX2_9BILA)

HSP 1 Score: 130 bits (327), Expect = 5.080e-36
Identity = 65/95 (68.42%), Postives = 76/95 (80.00%), Query Frame = 1 
Query:   16 GHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEP--EEG--GGKTYAEMDKADKDRISHRGRALALFK 288
            GHDGLN+LLAGYEDK+A AQC+FAF  GP +EP V+ GR PGRIV  RGP  FGWDPVF+P  E+G  GGKT+AEMDK +K+RISHR R+L L K
Sbjct:   88 GHDGLNKLLAGYEDKTAYAQCVFAFCAGPTSEPIVFDGRCPGRIVPARGPNSFGWDPVFQPDDEQGQPGGKTFAEMDKTEKNRISHRSRSLQLVK 182
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: A0A7R9UGY0_9STRA (Inosine triphosphate pyrophosphatase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGY0_9STRA)

HSP 1 Score: 137 bits (345), Expect = 7.190e-36
Identity = 62/87 (71.26%), Postives = 76/87 (87.36%), Query Frame = 1 
Query:   16 GHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRAL 276
            GHDGLNR+LAG++DKSA AQCIFA++ GPGA+  V+VGRTPGRIV  RGP +FGWDP+F+P+EG G TYAEMDK+ K+ ISHRGR+L
Sbjct:  432 GHDGLNRMLAGFDDKSAYAQCIFAYTDGPGADVEVFVGRTPGRIVPARGPLDFGWDPIFQPDEGEGMTYAEMDKSSKNLISHRGRSL 518
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: A0A836BS33_9CHLO (Inosine triphosphate pyrophosphatase n=5 Tax=Chlamydomonadales TaxID=3042 RepID=A0A836BS33_9CHLO)

HSP 1 Score: 130 bits (326), Expect = 7.390e-36
Identity = 63/91 (69.23%), Postives = 75/91 (82.42%), Query Frame = 1 
Query:   16 GHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRALALFK 288
            GHDGLNR+LAG+EDK+A AQCIFA++ GP  EP V+VGRTPGRIV  RGP +FGWDPVFEPE G  +TYAEMDK  K++ISHR R+L L +
Sbjct:   95 GHDGLNRMLAGFEDKTAYAQCIFAYTPGPDTEPIVFVGRTPGRIVPARGPSDFGWDPVFEPE-GFSETYAEMDKDTKNKISHRYRSLDLLR 184
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: A0A7R9VBI1_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas euryale TaxID=1486919 RepID=A0A7R9VBI1_9CHLO)

HSP 1 Score: 127 bits (318), Expect = 1.040e-35
Identity = 63/98 (64.29%), Postives = 78/98 (79.59%), Query Frame = 1 
Query:   16 GHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRALALFKRDLESRA 309
            GH+GLNR+LAG+EDK+A AQCIFA++ GPG EP  +VGRT GRIVA RGP +FGWDPVFE + G G+TYAEMDK  K+ ISHR R+LA+ +  L + A
Sbjct:   14 GHEGLNRMLAGFEDKTAYAQCIFAYTPGPGVEPITFVGRTKGRIVAARGPSDFGWDPVFEAD-GFGQTYAEMDKEVKNTISHRYRSLAMLREYLVANA 110
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BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Match: S8A4A4_DACHA (Inosine triphosphate pyrophosphatase n=1 Tax=Dactylellina haptotyla (strain CBS 200.50) TaxID=1284197 RepID=S8A4A4_DACHA)

HSP 1 Score: 129 bits (323), Expect = 1.880e-35
Identity = 63/96 (65.62%), Postives = 74/96 (77.08%), Query Frame = 1 
Query:   16 GHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIVAPRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRALALFKRDLES 303
            GH GLN+LLAG+EDKSA A C FAFS GPG EP ++ GRT G+IV PRGPP+FGWDP+FE E   G TYAEMDK  K+ +SHRG+AL  FK  LE+
Sbjct:   90 GHSGLNKLLAGFEDKSAEAVCTFAFSEGPGCEPMIFQGRTEGKIVCPRGPPKFGWDPIFEYE---GVTYAEMDKDRKNSVSHRGKALEKFKTFLET 182
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90198.20908.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8UDQ2_VOLCA1.160e-3764.00Inosine triphosphate pyrophosphatase n=1 Tax=Volvo... [more]
A0A7S4RKQ8_9DINO4.290e-3763.64Inosine triphosphate pyrophosphatase n=1 Tax=Alexa... [more]
A0A6G1ML38_ORBOL2.390e-3665.63Inosine triphosphate pyrophosphatase n=6 Tax=Orbil... [more]
A0A7S1AIT3_NOCSC3.940e-3674.42Inosine triphosphate pyrophosphatase n=1 Tax=Nocti... [more]
F0XWP7_AURAN4.630e-3661.40Inosine triphosphate pyrophosphatase n=1 Tax=Aureo... [more]
A0A815TPX2_9BILA5.080e-3668.42Inosine triphosphate pyrophosphatase n=3 Tax=Rotar... [more]
A0A7R9UGY0_9STRA7.190e-3671.26Inosine triphosphate pyrophosphatase n=1 Tax=Pingu... [more]
A0A836BS33_9CHLO7.390e-3669.23Inosine triphosphate pyrophosphatase n=5 Tax=Chlam... [more]
A0A7R9VBI1_9CHLO1.040e-3564.29Hypothetical protein n=1 Tax=Chlamydomonas euryale... [more]
S8A4A4_DACHA1.880e-3565.63Inosine triphosphate pyrophosphatase n=1 Tax=Dacty... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90198contigM-pyrifera_M_contig90198:16..357 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score137.9
Seed ortholog evalue3e-30
Seed eggNOG ortholog3067.XP_002956779.1
KEGG rclassRC00002
KEGG koko:K01519
KEGG ReactionR00426,R00720,R01855,R02100,R02720,R03531,R08243
KEGG Pathwayko00230,ko00983,ko01100,map00230,map00983,map01100
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006139,GO:0006725,GO:0006753,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0009056,GO:0009058,GO:0009141,GO:0009143,GO:0009987,GO:0016462,GO:0016787,GO:0016817,GO:0016818,GO:0018130,GO:0019438,GO:0019439,GO:0019637,GO:0034404,GO:0034641,GO:0034654,GO:0034655,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044270,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046434,GO:0046483,GO:0046700,GO:0047429,GO:0055086,GO:0071704,GO:1901292,GO:1901360,GO:1901361,GO:1901362,GO:1901575,GO:1901576
EggNOG free text desc.Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions
EggNOG OGs34JW4@3041,37PRW@33090,COG0127@1,KOG3222@2759
COG Functional cat.F
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size342
Cds size342
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816813.270281-CDS-M-pyrifera_M_contig90198:15..3571622816813.270281-CDS-M-pyrifera_M_contig90198:15..357Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90198 16..357 +
1692278193.5335298-CDS-M-pyrifera_M_contig90198:15..3571692278193.5335298-CDS-M-pyrifera_M_contig90198:15..357Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90198 16..357 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90198.20908.1prot_M-pyrifera_M_contig90198.20908.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90198 16..357 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90198.20908.1

>prot_M-pyrifera_M_contig90198.20908.1 ID=prot_M-pyrifera_M_contig90198.20908.1|Name=mRNA_M-pyrifera_M_contig90198.20908.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp
FFVFAGHDGLNRLLAGYEDKSAVAQCIFAFSTGPGAEPSVYVGRTPGRIV
APRGPPEFGWDPVFEPEEGGGKTYAEMDKADKDRISHRGRALALFKRDLE
SRAQEVADAVAAAA
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mRNA from alignment at M-pyrifera_M_contig90198:16..357+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90198.20908.1 ID=mRNA_M-pyrifera_M_contig90198.20908.1|Name=mRNA_M-pyrifera_M_contig90198.20908.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig90198:16..357+ (Macrocystis pyrifera P11B4 male)
TTCTTCGTCTTCGCAGGGCACGATGGACTAAACCGTCTGTTGGCTGGGTA
CGAGGACAAGAGCGCGGTGGCGCAGTGCATTTTCGCGTTTTCCACGGGCC
CTGGGGCAGAGCCGAGCGTGTACGTGGGGCGCACGCCTGGTCGGATCGTG
GCTCCCCGAGGCCCGCCTGAATTTGGGTGGGACCCCGTGTTTGAGCCGGA
GGAGGGCGGAGGAAAGACGTACGCCGAGATGGACAAGGCGGACAAGGACC
GCATCTCCCATCGAGGCCGCGCGCTGGCTCTATTCAAGCGCGACCTCGAG
AGCCGCGCGCAGGAAGTCGCCGATGCCGTCGCAGCGGCAGCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90198:16..357+

>mRNA_M-pyrifera_M_contig90198.20908.1 ID=mRNA_M-pyrifera_M_contig90198.20908.1|Name=mRNA_M-pyrifera_M_contig90198.20908.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig90198:16..357+ (Macrocystis pyrifera P11B4 male)
TTCTTCGTCTTCGCAGGGCACGATGGACTAAACCGTCTGTTGGCTGGGTA
CGAGGACAAGAGCGCGGTGGCGCAGTGCATTTTCGCGTTTTCCACGGGCC
CTGGGGCAGAGCCGAGCGTGTACGTGGGGCGCACGCCTGGTCGGATCGTG
GCTCCCCGAGGCCCGCCTGAATTTGGGTGGGACCCCGTGTTTGAGCCGGA
GGAGGGCGGAGGAAAGACGTACGCCGAGATGGACAAGGCGGACAAGGACC
GCATCTCCCATCGAGGCCGCGCGCTGGCTCTATTCAAGCGCGACCTCGAG
AGCCGCGCGCAGGAAGTCGCCGATGCCGTCGCAGCGGCAGCGTTCTTCGT
CTTCGCAGGGCACGATGGACTAAACCGTCTGTTGGCTGGGTACGAGGACA
AGAGCGCGGTGGCGCAGTGCATTTTCGCGTTTTCCACGGGCCCTGGGGCA
GAGCCGAGCGTGTACGTGGGGCGCACGCCTGGTCGGATCGTGGCTCCCCG
AGGCCCGCCTGAATTTGGGTGGGACCCCGTGTTTGAGCCGGAGGAGGGCG
GAGGAAAGACGTACGCCGAGATGGACAAGGCGGACAAGGACCGCATCTCC
CATCGAGGCCGCGCGCTGGCTCTATTCAAGCGCGACCTCGAGAGCCGCGC
GCAGGAAGTCGCCGATGCCGTCGCAGCGGCAGCG
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