mRNA_M-pyrifera_M_contig90189.20904.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90189.20904.1
Unique NamemRNA_M-pyrifera_M_contig90189.20904.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: A0A517PRH7_9PLAN (Glycogen debranching enzyme n=7 Tax=Planctomycetaceae TaxID=126 RepID=A0A517PRH7_9PLAN)

HSP 1 Score: 556 bits (1432), Expect = 1.460e-193
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRST 792
            RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRST
Sbjct:  348 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRST 611          
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: A0A517PLN5_9PLAN (Glycogen debranching enzyme n=2 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PLN5_9PLAN)

HSP 1 Score: 451 bits (1161), Expect = 1.200e-152
Identity = 207/264 (78.41%), Postives = 234/264 (88.64%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRST 792
            RRLI+DSLRYWAKEMHVDGFRFDLASVFSR  DG+++L+QPPLFDQIA DPDLA+VRLIAEPWDASGLYQLG SFPGRTWMQWN +FRDT+QQF+RGD GL+  LMTRLYGS+DLFPDDT HAFRPFQS+N++ SHDGFTM DL +YN KHN  N  NN DGP++FSWN GWEG +QVPQEV +LRKRQ K FCCLLML+NGSPMFRMGDEFMQTQ GNNNP+NQDNE SWLDW R ++++EVF FFK+MIAFRKSH +LG ST
Sbjct:  344 RRLILDSLRYWAKEMHVDGFRFDLASVFSRGGDGAVNLNQPPLFDQIASDPDLAHVRLIAEPWDASGLYQLGKSFPGRTWMQWNGQFRDTLQQFVRGDRGLISQLMTRLYGSNDLFPDDTYHAFRPFQSINFITSHDGFTMVDLTAYNRKHNAANGLNNQDGPHDFSWNCGWEGNDQVPQEVTDLRKRQVKYFCCLLMLSNGSPMFRMGDEFMQTQGGNNNPFNQDNETSWLDWDRLKQHEEVFRFFKKMIAFRKSHGMLGSST 607          
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: A0A518L145_9BACT (Glycogen debranching enzyme n=2 Tax=Planctomycetes bacterium TBK1r TaxID=2527963 RepID=A0A518L145_9BACT)

HSP 1 Score: 444 bits (1143), Expect = 5.540e-150
Identity = 204/264 (77.27%), Postives = 232/264 (87.88%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRST 792
            R LIVDSLRYWAKEMHVDGFRFDLASVFSR S+G+++L QPPLFDQIA DPDLANVRLIAEPWDA+GLYQLG+SFPG+TWMQWN R+RDT+Q+F+RGD G+VPDLMTRLYGSSDLFPD    +FRPFQS+N++ASHDG T+YDL+SYN KHN  N ++N DGP EF  N+GWEG  + PQEV++LRKRQ KNFCCLLML+ G+PMFRMGDEFMQTQ GNNNPYNQDNEISWLDW R E NQEVF FFK MIAFRK+H  +GRST
Sbjct:  347 RSLIVDSLRYWAKEMHVDGFRFDLASVFSRDSEGNVNLQQPPLFDQIASDPDLANVRLIAEPWDAAGLYQLGSSFPGQTWMQWNGRYRDTLQRFVRGDVGMVPDLMTRLYGSSDLFPDHPSQSFRPFQSINFIASHDGSTIYDLISYNEKHNEANGEDNRDGPTEFRCNNGWEGDTEAPQEVLDLRKRQVKNFCCLLMLSAGTPMFRMGDEFMQTQGGNNNPYNQDNEISWLDWSRLEANQEVFRFFKNMIAFRKAHPTIGRST 610          
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: A0A518I3E5_9BACT (Glycogen debranching enzyme n=4 Tax=Pirellulaceae TaxID=2691357 RepID=A0A518I3E5_9BACT)

HSP 1 Score: 440 bits (1132), Expect = 1.290e-148
Identity = 206/264 (78.03%), Postives = 228/264 (86.36%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRST 792
            R LIVDSLRYWAKEMHVDGFRFDLASVFSR S+G+I+L QPPLFDQIA DPDLANVRLIAEPWDA+GLYQLG+SFPG+TWMQWN R+RDT+Q+F+RGD G++PDLMTRLYGSSDLFPD    ++RPFQS+NYVASHDG T+YDLVSYN KHN  N Q N DGP EFS NSGWEG     Q V +LRKRQ KNFCCLLML+ G+PMFRMGDEFMQTQ GNNNPYNQDNE SWLDW R E NQEVF FFK+MIAFRK+H  +GRST
Sbjct:  322 RSLIVDSLRYWAKEMHVDGFRFDLASVFSRDSEGNINLQQPPLFDQIASDPDLANVRLIAEPWDAAGLYQLGSSFPGQTWMQWNGRYRDTLQRFVRGDAGMLPDLMTRLYGSSDLFPDHPSQSYRPFQSINYVASHDGSTLYDLVSYNDKHNEANGQGNQDGPKEFSSNSGWEGDADASQSVRDLRKRQVKNFCCLLMLSAGTPMFRMGDEFMQTQGGNNNPYNQDNEASWLDWHRLESNQEVFRFFKQMIAFRKTHPSIGRST 585          
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: A0A2E9VJJ1_9PLAN (Glycogen debranching enzyme n=1 Tax=Rubinisphaera sp. TaxID=2024857 RepID=A0A2E9VJJ1_9PLAN)

HSP 1 Score: 438 bits (1126), Expect = 8.160e-148
Identity = 204/263 (77.57%), Postives = 229/263 (87.07%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRS 789
            RRLI+DSLRYW KEMHVDGFRFDLASVFSRTSDGS+DLS+PPLFDQIA DP+LAN+RLIAEPWDA+GLYQLG SFPGRTWMQWN RFR+ +Q+F+RGD G++PDLMTRLYGSSDLFPDD  +AFRPFQS+NY+ASHDGFTMYDL+SY +KHN  N  +N DGP E+S N G EG E VP EV++LR RQ KNFCCLLMLA G+PMFRMGDEFM TQ GNNNPYNQDNE SWLDW R E+NQEVF FFK+MI+FRKSH   G S
Sbjct:  322 RRLILDSLRYWTKEMHVDGFRFDLASVFSRTSDGSVDLSRPPLFDQIASDPELANIRLIAEPWDAAGLYQLGTSFPGRTWMQWNGRFRECIQRFVRGDQGMIPDLMTRLYGSSDLFPDDIFNAFRPFQSINYIASHDGFTMYDLLSYRNKHNQANGHDNMDGPEEYSNNCGQEGDEHVPLEVMSLRMRQMKNFCCLLMLAAGTPMFRMGDEFMHTQGGNNNPYNQDNETSWLDWLRMEQNQEVFRFFKQMISFRKSHPFGGSS 584          
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: A0A5C6DQ88_9BACT (Glycogen debranching enzyme n=2 Tax=Novipirellula artificiosorum TaxID=2528016 RepID=A0A5C6DQ88_9BACT)

HSP 1 Score: 436 bits (1122), Expect = 7.000e-147
Identity = 205/264 (77.65%), Postives = 229/264 (86.74%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRST 792
            RRLI+DSLR+W KEMHVDGFRFDLASVFSR SDGS+DL  PPLFDQI  DP+LAN+RLIAEPWDASGLYQLGASFPGRTWMQWN RFRD +Q+F+RGD GLV DLMTR+YGSS LFPDDT HA RPFQSVN++ASHDGFTMYDLVS++HKHN  N  +N DGPNEFS N G+EG    P +V+NLRKRQ KNFCCLLML+ G+PMFRMGDEFMQTQ GNNNPYNQDNE +WLDWRR E+  +VF FFK+MIAFRK+H  LGRST
Sbjct:  348 RRLILDSLRFWVKEMHVDGFRFDLASVFSRASDGSVDLHGPPLFDQIDSDPELANIRLIAEPWDASGLYQLGASFPGRTWMQWNGRFRDCLQRFVRGDRGLVSDLMTRVYGSSHLFPDDTFHANRPFQSVNFIASHDGFTMYDLVSFDHKHNEANGHDNSDGPNEFSGNGGYEGDLNTPHDVMNLRKRQMKNFCCLLMLSAGTPMFRMGDEFMQTQYGNNNPYNQDNETTWLDWRRLEKFPDVFRFFKQMIAFRKAHPSLGRST 611          
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: UPI0013DA3789 (isoamylase n=1 Tax=Candidatus Laterigemmans baculatus TaxID=2770505 RepID=UPI0013DA3789)

HSP 1 Score: 429 bits (1103), Expect = 6.050e-144
Identity = 197/264 (74.62%), Postives = 226/264 (85.61%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRST 792
            R LIVDSLRYW +EMHVDGFRFDLASVFSR S+G I L QPPLFDQIA DP+LA++RLIAEPWDA+GLYQLG+SFPG+TWMQWN R+RDT+Q+F+RGD G+V DLMTRLYGS DLFPD    +FRPFQS+NY+ SHDGFT+YDLVS+N KHN  N   N DGP E+  NSGWEG    PQ V+++RKRQ KNFCCLLML+ G+PMFRMGDE+MQTQ GNNNPYNQDNE +WLDWRR +EN+EVF FFKRMIAFRKSH+ LGRST
Sbjct:  346 RSLIVDSLRYWVREMHVDGFRFDLASVFSRDSEGKISLQQPPLFDQIASDPELADIRLIAEPWDAAGLYQLGSSFPGQTWMQWNGRYRDTLQRFVRGDAGMVSDLMTRLYGSCDLFPDHPSRSFRPFQSINYITSHDGFTLYDLVSFNDKHNGANGHKNADGPIEYGCNSGWEGDINAPQHVLDVRKRQIKNFCCLLMLSAGTPMFRMGDEYMQTQGGNNNPYNQDNETTWLDWRRLKENEEVFSFFKRMIAFRKSHTSLGRST 609          
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: A0A517V6Y9_9PLAN (Glycogen debranching enzyme n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517V6Y9_9PLAN)

HSP 1 Score: 396 bits (1018), Expect = 1.550e-131
Identity = 177/263 (67.30%), Postives = 217/263 (82.51%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRS 789
            RRL+++SLRYW +EMHVDGFRFDLASVF+R SDGSI+ + PP+F QIA D DLA+VRLI EPWDA G YQLG +FPG  WMQWNA +RDT+Q+F+RG+ G VPD MTR+YGSSD FPDD VHA+ P+Q +NYV SHDGFT+YDLVS+NHK+N  N   N DG ++FSWN GWEG ++VP +V+ LRK+Q KNF CLLML+ G+PMFRMGDEF+QTQ GN+NPYNQDNE +WLDW+R E+N E+F FFK MI FR++H  + RS
Sbjct:  325 RRLLLESLRYWVREMHVDGFRFDLASVFTRNSDGSINTTDPPIFGQIAADADLAHVRLIGEPWDAGGAYQLGRNFPGTKWMQWNAAYRDTIQRFVRGEAGNVPDFMTRIYGSSDSFPDDLVHAYHPYQGINYVTSHDGFTLYDLVSFNHKNNWTNGHCNMDGHDDFSWNCGWEGDDEVPVDVMQLRKQQVKNFFCLLMLSEGTPMFRMGDEFLQTQHGNSNPYNQDNETTWLDWQRLEDNHEIFRFFKMMIQFRRTHPSICRS 587          
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: A0A518C5W4_9BACT (Glycogen debranching enzyme n=1 Tax=Bremerella volcania TaxID=2527984 RepID=A0A518C5W4_9BACT)

HSP 1 Score: 393 bits (1009), Expect = 3.400e-130
Identity = 177/263 (67.30%), Postives = 217/263 (82.51%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRS 789
            RR++++SLRYWA E+ VDGFRFDLAS F+R SDGSI+ + PP+F QIA D DLA+VRLIAEPWDA G YQLG +FPG  WMQWN  +RD +QQ +RGD  +VP+LMTR+YGSSDLFPDD  HA+ P+QSVNYV+SHDGFT+YDLVS+N+K+N  N   N DG N+FSWN GWEG +QVP +V+ LRK+Q KNF CLLML+ G+PMFRMGDEF+QTQ GNNNPYNQDNE +WL+WRR + +Q++F FFKRMI FR+SH  + RS
Sbjct:  320 RRMVLESLRYWAHELQVDGFRFDLASAFARNSDGSINTTDPPIFGQIAADDDLAHVRLIAEPWDAGGAYQLGRNFPGTKWMQWNGAYRDALQQVVRGDSSMVPELMTRIYGSSDLFPDDLSHAYHPYQSVNYVSSHDGFTLYDLVSFNYKNNWANGHENADGYNDFSWNCGWEGDDQVPADVMRLRKQQVKNFFCLLMLSAGTPMFRMGDEFLQTQRGNNNPYNQDNETTWLNWRRLDLHQDIFRFFKRMIRFRRSHPSIARS 582          
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Match: A0A518I9W7_9PLAN (Glycogen debranching enzyme n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I9W7_9PLAN)

HSP 1 Score: 385 bits (988), Expect = 4.370e-127
Identity = 178/263 (67.68%), Postives = 211/263 (80.23%), Query Frame = 1
Query:    1 RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGDPDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCGLVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHKHNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLANGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRMIAFRKSHSLLGRS 789
            R+LI+DSL+YW+KEMHVDGFRFDLAS+ +R +DGSI+ S P    QIA D  LA  R IAEPWDA+G +QLG+ FPG  WMQWNA +RDT+QQF+RGD G +PDLMTRLYGSSDLFPDD +HA RP+QSVNYV SHDGF++YDLVSYN K N  N +NN DG  ++SWN GWEG E    EV+ LRK+Q KNF CLLM++NGSPMFRMGDEF+QTQ GNNNPYNQDNE SWLDW R + ++++F F K +IAFRK HS L RS
Sbjct:  320 RKLIIDSLQYWSKEMHVDGFRFDLASILTRRNDGSIEESNPTTLGQIASDSALAGRRFIAEPWDAAGEFQLGSKFPGHRWMQWNAAYRDTIQQFVRGDAGRIPDLMTRLYGSSDLFPDDCMHALRPYQSVNYVTSHDGFSLYDLVSYNTKRNWKNGENNADGTRDYSWNCGWEGEEGASPEVMQLRKQQVKNFFCLLMVSNGSPMFRMGDEFLQTQEGNNNPYNQDNETSWLDWSRLDTHRDMFRFVKLIIAFRKRHSSLCRS 582          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90189.20904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PRH7_9PLAN1.460e-193100.00Glycogen debranching enzyme n=7 Tax=Planctomycetac... [more]
A0A517PLN5_9PLAN1.200e-15278.41Glycogen debranching enzyme n=2 Tax=Gimesia chilik... [more]
A0A518L145_9BACT5.540e-15077.27Glycogen debranching enzyme n=2 Tax=Planctomycetes... [more]
A0A518I3E5_9BACT1.290e-14878.03Glycogen debranching enzyme n=4 Tax=Pirellulaceae ... [more]
A0A2E9VJJ1_9PLAN8.160e-14877.57Glycogen debranching enzyme n=1 Tax=Rubinisphaera ... [more]
A0A5C6DQ88_9BACT7.000e-14777.65Glycogen debranching enzyme n=2 Tax=Novipirellula ... [more]
UPI0013DA37896.050e-14474.62isoamylase n=1 Tax=Candidatus Laterigemmans bacula... [more]
A0A517V6Y9_9PLAN1.550e-13167.30Glycogen debranching enzyme n=2 Tax=Gimesia TaxID=... [more]
A0A518C5W4_9BACT3.400e-13067.30Glycogen debranching enzyme n=1 Tax=Bremerella vol... [more]
A0A518I9W7_9PLAN4.370e-12767.68Glycogen debranching enzyme n=2 Tax=Gimesia TaxID=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90189contigM-pyrifera_M_contig90189:2..793 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score376.3
Seed ortholog evalue1.2e-101
Seed eggNOG ortholog237368.SCABRO_00749
Preferred nameglgX
KEGG koko:K01214
KEGG ReactionR09995,R11261
KEGG Pathwayko00500,ko01100,ko01110,map00500,map01100,map01110
KEGG ModuleM00565
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Belongs to the glycosyl hydrolase 13 family
EggNOG OGs2IXJM@203682,COG1523@1,COG1523@2
EC3.2.1.68
COG Functional cat.G
CAZyCBM48,GH13
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000
Exons1
Model size792
Cds size792
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816813.1061609-CDS-M-pyrifera_M_contig90189:1..7931622816813.1061609-CDS-M-pyrifera_M_contig90189:1..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90189 2..793 +
1692278193.4609523-CDS-M-pyrifera_M_contig90189:1..7931692278193.4609523-CDS-M-pyrifera_M_contig90189:1..793Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90189 2..793 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90189.20904.1prot_M-pyrifera_M_contig90189.20904.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90189 2..793 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90189.20904.1

>prot_M-pyrifera_M_contig90189.20904.1 ID=prot_M-pyrifera_M_contig90189.20904.1|Name=mRNA_M-pyrifera_M_contig90189.20904.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp
RRLIVDSLRYWAKEMHVDGFRFDLASVFSRTSDGSIDLSQPPLFDQIAGD
PDLANVRLIAEPWDASGLYQLGASFPGRTWMQWNARFRDTVQQFIRGDCG
LVPDLMTRLYGSSDLFPDDTVHAFRPFQSVNYVASHDGFTMYDLVSYNHK
HNHVNSQNNHDGPNEFSWNSGWEGVEQVPQEVVNLRKRQTKNFCCLLMLA
NGSPMFRMGDEFMQTQSGNNNPYNQDNEISWLDWRRFEENQEVFCFFKRM
IAFRKSHSLLGRST
back to top

mRNA from alignment at M-pyrifera_M_contig90189:2..793+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90189.20904.1 ID=mRNA_M-pyrifera_M_contig90189.20904.1|Name=mRNA_M-pyrifera_M_contig90189.20904.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig90189:2..793+ (Macrocystis pyrifera P11B4 male)
CGTCGTTTGATCGTGGATAGCTTGCGCTATTGGGCAAAGGAGATGCATGT CGATGGTTTTCGATTTGATCTGGCCTCAGTATTTTCACGAACATCGGATG GAAGTATCGATTTAAGTCAACCACCTCTTTTTGACCAGATCGCCGGCGAT CCGGATTTAGCCAACGTTCGCTTAATCGCTGAACCATGGGATGCTTCGGG TTTGTATCAACTTGGCGCATCCTTTCCAGGGCGTACCTGGATGCAGTGGA ATGCTCGGTTTCGTGATACAGTGCAGCAGTTTATACGAGGAGATTGTGGA CTGGTTCCCGATCTGATGACGCGTTTATATGGAAGTAGCGACTTATTTCC TGATGATACAGTCCATGCATTTCGTCCCTTTCAAAGTGTGAACTATGTTG CATCGCATGATGGTTTTACGATGTATGACCTCGTTTCGTATAATCATAAA CACAACCATGTAAACAGCCAAAACAATCACGATGGGCCGAACGAGTTTAG CTGGAATAGCGGCTGGGAAGGCGTTGAACAAGTGCCTCAAGAGGTCGTCA ACTTACGCAAACGACAGACCAAAAACTTTTGCTGTTTGCTCATGCTGGCG AATGGCAGCCCCATGTTTCGTATGGGTGATGAGTTTATGCAAACGCAAAG TGGTAACAACAATCCTTACAATCAAGATAACGAAATAAGTTGGCTCGATT GGCGGCGATTTGAAGAAAACCAAGAGGTGTTCTGCTTTTTCAAACGAATG ATTGCGTTCCGTAAATCGCATTCTTTGCTTGGACGCTCCACC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig90189:2..793+

>mRNA_M-pyrifera_M_contig90189.20904.1 ID=mRNA_M-pyrifera_M_contig90189.20904.1|Name=mRNA_M-pyrifera_M_contig90189.20904.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig90189:2..793+ (Macrocystis pyrifera P11B4 male)
CGTCGTTTGATCGTGGATAGCTTGCGCTATTGGGCAAAGGAGATGCATGT
CGATGGTTTTCGATTTGATCTGGCCTCAGTATTTTCACGAACATCGGATG
GAAGTATCGATTTAAGTCAACCACCTCTTTTTGACCAGATCGCCGGCGAT
CCGGATTTAGCCAACGTTCGCTTAATCGCTGAACCATGGGATGCTTCGGG
TTTGTATCAACTTGGCGCATCCTTTCCAGGGCGTACCTGGATGCAGTGGA
ATGCTCGGTTTCGTGATACAGTGCAGCAGTTTATACGAGGAGATTGTGGA
CTGGTTCCCGATCTGATGACGCGTTTATATGGAAGTAGCGACTTATTTCC
TGATGATACAGTCCATGCATTTCGTCCCTTTCAAAGTGTGAACTATGTTG
CATCGCATGATGGTTTTACGATGTATGACCTCGTTTCGTATAATCATAAA
CACAACCATGTAAACAGCCAAAACAATCACGATGGGCCGAACGAGTTTAG
CTGGAATAGCGGCTGGGAAGGCGTTGAACAAGTGCCTCAAGAGGTCGTCA
ACTTACGCAAACGACAGACCAAAAACTTTTGCTGTTTGCTCATGCTGGCG
AATGGCAGCCCCATGTTTCGTATGGGTGATGAGTTTATGCAAACGCAAAG
TGGTAACAACAATCCTTACAATCAAGATAACGAAATAAGTTGGCTCGATT
GGCGGCGATTTGAAGAAAACCAAGAGGTGTTCTGCTTTTTCAAACGAATG
ATTGCGTTCCGTAAATCGCATTCTTTGCTTGGACGCTCCACCCGTCGTTT
GATCGTGGATAGCTTGCGCTATTGGGCAAAGGAGATGCATGTCGATGGTT
TTCGATTTGATCTGGCCTCAGTATTTTCACGAACATCGGATGGAAGTATC
GATTTAAGTCAACCACCTCTTTTTGACCAGATCGCCGGCGATCCGGATTT
AGCCAACGTTCGCTTAATCGCTGAACCATGGGATGCTTCGGGTTTGTATC
AACTTGGCGCATCCTTTCCAGGGCGTACCTGGATGCAGTGGAATGCTCGG
TTTCGTGATACAGTGCAGCAGTTTATACGAGGAGATTGTGGACTGGTTCC
CGATCTGATGACGCGTTTATATGGAAGTAGCGACTTATTTCCTGATGATA
CAGTCCATGCATTTCGTCCCTTTCAAAGTGTGAACTATGTTGCATCGCAT
GATGGTTTTACGATGTATGACCTCGTTTCGTATAATCATAAACACAACCA
TGTAAACAGCCAAAACAATCACGATGGGCCGAACGAGTTTAGCTGGAATA
GCGGCTGGGAAGGCGTTGAACAAGTGCCTCAAGAGGTCGTCAACTTACGC
AAACGACAGACCAAAAACTTTTGCTGTTTGCTCATGCTGGCGAATGGCAG
CCCCATGTTTCGTATGGGTGATGAGTTTATGCAAACGCAAAGTGGTAACA
ACAATCCTTACAATCAAGATAACGAAATAAGTTGGCTCGATTGGCGGCGA
TTTGAAGAAAACCAAGAGGTGTTCTGCTTTTTCAAACGAATGATTGCGTT
CCGTAAATCGCATTCTTTGCTTGGACGCTCCACC
back to top