mRNA_M-pyrifera_M_contig90183.20902.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: A0A7S4I848_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4I848_9EUKA) HSP 1 Score: 112 bits (279), Expect = 1.980e-27 Identity = 52/113 (46.02%), Postives = 71/113 (62.83%), Query Frame = 1 Query: 1 GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEYLVEQKQVKINRLKVDLDGLRL 339 G+ + YWL+P +LV FDF+PH+ + P ENRY TT+ ++TY LQP LS++L YQ+YHL HHLYP IPFYRY KW ++E L + K K LK+ + R+ Sbjct: 222 GYFYQVYYYWLLPCVFCHTMLVFAFDFLPHFQHDTRPTENRYNTTSNIETYRVLQPLLSIILHYQNYHLSHHLYPSIPFYRYKGKWNARREEL-KAKNAKTLILKLPISKPRM 333
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: A0A382K9Y8_9ZZZZ (FA_desaturase domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382K9Y8_9ZZZZ) HSP 1 Score: 82.0 bits (201), Expect = 9.860e-17 Identity = 40/96 (41.67%), Postives = 57/96 (59.38%), Query Frame = 1 Query: 1 GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEYLVEQ 288 G+ +L W++PS +G L+ ++F F+PH+ T EN YQ T + + +L LSV YQ+YHLIHHLYP +PFY Y N W + + L Q Sbjct: 123 GYGMEVLFLWILPSRIGLALVALVFVFLPHYPSNITAEENEYQATTIRLGWEWLLTPLSV---YQNYHLIHHLYPTLPFYNYINVWHLRYDELTSQ 215
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: F6ELS3_HOYSD (Electron transfer protein FdxB n=3 Tax=Hoyosella TaxID=697025 RepID=F6ELS3_HOYSD) HSP 1 Score: 84.3 bits (207), Expect = 1.130e-16 Identity = 41/96 (42.71%), Postives = 61/96 (63.54%), Query Frame = 1 Query: 1 GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEYLVEQ 288 G +LL +L+P +G +L FD++PH L AT AENR+ T + + +L L+ L+ YQ+YHL+HHL+P IPFYRY + WR ++ +EQ Sbjct: 220 GLGWYLLVIYLIPQRIGLTVLAWWFDWLPHHGLAATAAENRFHATRVRVGWEWL---LTPLMLYQNYHLVHHLHPAIPFYRYVSAWRNNEQAYLEQ 312
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: A0A2H0DM10_9BACT (Delta(12)-fatty acid dehydrogenase n=1 Tax=Elusimicrobia bacterium CG22_combo_CG10-13_8_21_14_all_63_91 TaxID=2014312 RepID=A0A2H0DM10_9BACT) HSP 1 Score: 82.4 bits (202), Expect = 1.150e-16 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1 Query: 4 FTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEYLVEQ 288 FT +L YW+VP+ L LL FD++PH E+RY+ + ++ +P L+ L +Q+YHLIHHL+P +PFY Y+ WR +KE+L+ + Sbjct: 165 FTPGVLFYWIVPAKLASALLAFSFDYLPHRPHSVPAREDRYRASHVID-----EPLLTPLFLFQNYHLIHHLHPGVPFYGYTALWRRQKEFLLSR 254
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: A0A7C7SD90_9GAMM (FA_desaturase domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C7SD90_9GAMM) HSP 1 Score: 79.7 bits (195), Expect = 1.660e-16 Identity = 41/96 (42.71%), Postives = 55/96 (57.29%), Query Frame = 1 Query: 1 GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEYLVEQ 288 G+ +L WL+ S L+ ++F ++PH+ + T EN YQ T + Q + FL L+ L YQ+YHLIHHLYP PFY Y WR K E L Q Sbjct: 49 GYGMEVLFLWLLASRFALFLVALVFVYLPHYPAKVTAQENEYQATTISQGWEFL---LTPLFVYQNYHLIHHLYPTAPFYNYIKIWRLKYEELNAQ 141
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: A0A7S4P6I3_9EUKA (Hypothetical protein n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4P6I3_9EUKA) HSP 1 Score: 82.0 bits (201), Expect = 2.400e-16 Identity = 39/104 (37.50%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 1 GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEYLVEQKQVKINRL 312 G+ L W++PS L FD++PH ++RY TTA++ ++ L P + LL YQ+YH++HHLYP IPF RY + KK+ L ++K++ + RL Sbjct: 191 GYFHEALVCWVIPSRFAIFTLAATFDYLPHSPHVVPITQSRYHTTALMVSHKMLTPLFTCLLLYQNYHIMHHLYPTIPFPRYKRAYECKKQEL-DEKKIPVRRL 293
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: S4Y2Z1_SORCE (FA_desaturase domain-containing protein n=5 Tax=Sorangium cellulosum TaxID=56 RepID=S4Y2Z1_SORCE) HSP 1 Score: 82.0 bits (201), Expect = 2.600e-16 Identity = 41/108 (37.96%), Postives = 62/108 (57.41%), Query Frame = 1 Query: 1 GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEYLVEQKQVKINRLKVDL 324 G+ L YW+VP+ L L FD++PH+ E T +NRY+ T + + F +VLL Q YHLIHHLYP +PF+RY W+ ++E L++ + + L+ L Sbjct: 172 GYGELALLYWIVPARLAIFFLAFAFDYLPHYPHEITAGQNRYRATRAIDSALF-----NVLLFGQTYHLIHHLYPAVPFFRYRTVWKYQREELMKLQSENLAPLRAPL 274
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: A0A2D8J4K7_9ALTE (FA_desaturase domain-containing protein n=1 Tax=Alteromonadaceae bacterium TaxID=1916082 RepID=A0A2D8J4K7_9ALTE) HSP 1 Score: 80.9 bits (198), Expect = 4.380e-16 Identity = 42/113 (37.17%), Postives = 65/113 (57.52%), Query Frame = 1 Query: 1 GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEYLVEQKQVKINRLKVDLDGLRL 339 G+ + +L YWL+P + V L + FD++PH AT +N +Q T Y +L L+ +L +Q+YHL+HHLYP++PFYRY WR + + + L VD+ G R+ Sbjct: 162 GWGQEVLLYWLLPGRIALVFLALAFDYLPHHPRLATQQQNPWQATNNRVGYEWL---LTPVLMWQNYHLVHHLYPRVPFYRYLRVWRAGSDLFMPNQP-----LLVDIFGRRI 266
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: A9FXA0_SORC5 (Delta(12)-fatty acid dehydrogenase n=2 Tax=Sorangium cellulosum TaxID=56 RepID=A9FXA0_SORC5) HSP 1 Score: 80.9 bits (198), Expect = 1.190e-15 Identity = 39/101 (38.61%), Postives = 58/101 (57.43%), Query Frame = 1 Query: 1 GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEYLVEQKQVKI 303 G+ L YW++P+ L L FD++PH+ E T +NRY T + + F +VLL Q YHLIHHLYP +PF+RY W+ ++E L++ + I Sbjct: 236 GYGELALLYWILPARLAIFFLAFAFDYLPHYPHEITATQNRYSATRAVDSALF-----NVLLFGQTYHLIHHLYPAVPFFRYRTVWKHQREELMKLRSESI 331
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Match: UPI0011CBB592 (fatty acid desaturase n=1 Tax=Vogesella mureinivorans TaxID=657276 RepID=UPI0011CBB592) HSP 1 Score: 80.1 bits (196), Expect = 1.270e-15 Identity = 39/92 (42.39%), Postives = 56/92 (60.87%), Query Frame = 1 Query: 1 GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTYSFLQPFLSVLLQYQDYHLIHHLYPQIPFYRYSNKWREKKEY 276 GF +L YW +P + V+LV+ F +PH E T +++Y+ T + Y +L LS LL Q+YHL+HHLYP +PFYRY WR K+ + Sbjct: 186 GFGWEVLLYWFLPGRIAIVMLVLTFSVLPHVPHEVTQKDDKYRATNVRVGYEWL---LSPLLLNQNYHLVHHLYPTVPFYRYLAVWRAKERF 274 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90183.20902.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90183.20902.1 >prot_M-pyrifera_M_contig90183.20902.1 ID=prot_M-pyrifera_M_contig90183.20902.1|Name=mRNA_M-pyrifera_M_contig90183.20902.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=114bp GFTRHLLTYWLVPSFLGQVLLVILFDFIPHWNLEATPAENRYQTTAMLQTback to top mRNA from alignment at M-pyrifera_M_contig90183:441..782- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90183.20902.1 ID=mRNA_M-pyrifera_M_contig90183.20902.1|Name=mRNA_M-pyrifera_M_contig90183.20902.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=342bp|location=Sequence derived from alignment at M-pyrifera_M_contig90183:441..782- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90183:441..782- >mRNA_M-pyrifera_M_contig90183.20902.1 ID=mRNA_M-pyrifera_M_contig90183.20902.1|Name=mRNA_M-pyrifera_M_contig90183.20902.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=684bp|location=Sequence derived from alignment at M-pyrifera_M_contig90183:441..782- (Macrocystis pyrifera P11B4 male)back to top |