mRNA_M-pyrifera_M_contig90175.20898.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90175.20898.1
Unique NamemRNA_M-pyrifera_M_contig90175.20898.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A7Y3A8U6_9ACTN (AMP-binding protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7Y3A8U6_9ACTN)

HSP 1 Score: 276 bits (706), Expect = 7.300e-87
Identity = 157/264 (59.47%), Postives = 175/264 (66.29%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            SDP     ELA H  RT+PVIG    +RAD+YR AA         PIV +DES    A    L+           PG   E   W  P L DR AVMFTSGTTG PKGVEITQANYAF G  MAEAA L A DR +VVLPLFHANAQYYSFASAIWAGASV L+H FSAS F+P   R  AT ASLFAAPIRMILA+ +  E +SLR+CWFAQN++ + +D  +   GCRPRQLYGMTETIPAVLTD +  PRPD MG  T  C
Sbjct:   93 SDPMGRTPELADHIERTQPVIGFCSVERADIYRAAAPAAM-----PIVEIDESDVSLA----LL-----------PGT--EFADWASPALTDRAAVMFTSGTTGRPKGVEITQANYAFAGKAMAEAAALTAGDRHIVVLPLFHANAQYYSFASAIWAGASVALMHTFSASSFLPQCARHRATCASLFAAPIRMILARGSKTEGVSLRNCWFAQNIAADQHDTISDWLGCRPRQLYGMTETIPAVLTDEAADPRPDSMGRVTGGC 334          
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A6G2KPL8_9ACTN (ATP-dependent acyl-CoA ligase n=5 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6G2KPL8_9ACTN)

HSP 1 Score: 276 bits (705), Expect = 1.060e-86
Identity = 155/264 (58.71%), Postives = 177/264 (67.05%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            SDP     ELA H  RTRP  G   T RADVYR+AAA  P      I  +DE      A GSL A    A++            WP  ++RDR AVMFTSGTTG PKGVEITQANYAF G VMAE A LA +DRQLVVLPLFHANAQYYSFASAIW GASV L+  FSASGF+  A R  AT ASLFAAP+RMILA+ A  + + LRHCW+AQN++ + Y+      GCRPRQLYGMTETIPAVLT+ +++P P  MG  TP C
Sbjct:   90 SDPMGKAPELADHIERTRPKAGFCATSRADVYRQAAAVSPDLA---ITELDE------AGGSLDALMGNARVD-----------WPAADIRDRAAVMFTSGTTGRPKGVEITQANYAFCGQVMAERADLAPEDRQLVVLPLFHANAQYYSFASAIWTGASVALMPAFSASGFLAQAARHRATCASLFAAPMRMILARGAPVDGVGLRHCWYAQNIADDQYETLTAWLGCRPRQLYGMTETIPAVLTEPADNPVPSSMGQVTPGC 333          
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A7K2CTB9_9ACTN (ATP-dependent acyl-CoA ligase n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2CTB9_9ACTN)

HSP 1 Score: 272 bits (695), Expect = 2.170e-85
Identity = 154/264 (58.33%), Postives = 179/264 (67.80%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            SDP   V ELA H  RTRP  G   TDRA+VYR+AA   P+     I  +DE      A+GSL A    A++            WP   L DR AVMFTSGTTG PKGVE+TQANYAF G VMAE A LA +DRQLVVLPLFHANAQYYSFASAIW GASV L+  FSASGF+    R +AT ASLFAAP+RMILA+ A    + LRHCW+AQN++ E Y+  A+  GCRPRQLYGMTET+PAVLT+ +++P P  MG  TP C
Sbjct:   90 SDPMGKVPELADHIERTRPKAGFCATDRAEVYRQAAEMSPNLA---ITELDE------ASGSLEALVGSARVD-----------WPDVNLWDRAAVMFTSGTTGRPKGVEVTQANYAFCGQVMAERADLAPNDRQLVVLPLFHANAQYYSFASAIWTGASVALMPTFSASGFLAQVARHQATCASLFAAPLRMILARGAPVHGVGLRHCWYAQNIADEQYETLASWFGCRPRQLYGMTETVPAVLTEPTDNPVPSSMGQVTPGC 333          
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A4R7I428_9ACTN (Crotonobetaine/carnitine-CoA ligase n=1 Tax=Ilumatobacter fluminis TaxID=467091 RepID=A0A4R7I428_9ACTN)

HSP 1 Score: 272 bits (695), Expect = 5.650e-85
Identity = 154/269 (57.25%), Postives = 171/269 (63.57%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAK-----TADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            SDP     E A H  RT P +GV    RAD Y  AA         P++ +DE             A    +  P  G  +    WP  +  DR AVMFTSGTTG PKGVEITQANYAF G  MA AA L ADDRQ+VVLPLFHANAQYYSFASAI  GASV L+H FSASGF+P A R  ATHASLFA PIRMILA+      +DGE L LRHCWFAQNL  + ++ F    GCRPRQLYGMTETIPAVLTD ++ PRPD MGT T  C
Sbjct:   92 SDPMGRTPEFAEHIDRTSPAVGVCAASRADTYLPAAG------GRPVIQIDE-------------ADASFEWLPADGVGE----WPDVQATDRAAVMFTSGTTGRPKGVEITQANYAFAGTTMASAADLGADDRQIVVLPLFHANAQYYSFASAIAVGASVALMHTFSASGFIPQAARHRATHASLFAGPIRMILARGGPLDPSDGE-LQLRHCWFAQNLGDDQFETFGEWIGCRPRQLYGMTETIPAVLTDTTDDPRPDSMGTVTDGC 336          
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A848UB97_9ACTN (AMP-binding protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UB97_9ACTN)

HSP 1 Score: 270 bits (689), Expect = 4.240e-84
Identity = 155/264 (58.71%), Postives = 172/264 (65.15%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            SDP     ELA H  RT P +G    DR++VYR  AA G      P+  +DE             A       P     D    WP P L DR AVMFTSGTTG PKGVEITQANYAF G VMAEAA LA DDRQLVVLPLFHANAQYYSF SAIWAGASV L+H FSASGF+  ARR  AT ASLFAAP+RMILA+      ++LRHCWFAQN++T+ +D  +   GCRPRQLYGMTETIPAVLTD S  P P  MG+ T  C
Sbjct:   93 SDPMGRTPELADHVERTDPTVGFCARDRSEVYR--AAIGGR----PVFEIDE-------------ADAALAWLPDVAFTD----WPEPGLHDRAAVMFTSGTTGRPKGVEITQANYAFAGKVMAEAASLAPDDRQLVVLPLFHANAQYYSFCSAIWAGASVALMHTFSASGFLDQARRHAATCASLFAAPMRMILARGGPVGGVALRHCWFAQNVTTDQFDTLSEWFGCRPRQLYGMTETIPAVLTDTSADPDPASMGSVTAGC 333          
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A2E4MRQ0_9BACT (Acyl-CoA synthetase n=2 Tax=Bacteria TaxID=2 RepID=A0A2E4MRQ0_9BACT)

HSP 1 Score: 268 bits (684), Expect = 1.520e-83
Identity = 151/265 (56.98%), Postives = 176/265 (66.42%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAA-TGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            SDP +   ELA H  RTRP +G+   DRADVYR A    G  AE   ++ VDE+                A   P  GA    T W  P L DR AVMFTSGTTG PKGVEITQANYAF G VMAEA+ L  +DRQ+VVLPLFHANAQYYSFA AIW+GASV L+H FSAS F+P   R  AT ASLFAAPIRMILA+  + + + LRHCW+AQN++ E Y++ +   GCR RQLYGMTETIPAVLT+  + PR D MG+ T  C
Sbjct:   93 SDPMARRPELADHLERTRPSVGLCAVDRADVYRSALVDAGVSAE---VIEVDEAD---------------ASSLPSSGA--SYTDWVTPALSDRAAVMFTSGTTGRPKGVEITQANYAFAGKVMAEASELTVEDRQIVVLPLFHANAQYYSFAPAIWSGASVALMHTFSASNFLPQCARHSATAASLFAAPIRMILARGEEVDGVRLRHCWYAQNVTVEQYEQLSRWLGCRARQLYGMTETIPAVLTEAVDKPRHDSMGSVTEGC 337          
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A2E8DDS2_9ACTN (Acyl-CoA synthetase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8DDS2_9ACTN)

HSP 1 Score: 264 bits (675), Expect = 3.570e-82
Identity = 149/265 (56.23%), Postives = 168/265 (63.40%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGAR-DESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            SDP  SV+EL  H  RT PV+GV  + R+DVY++A                         G + A Q   Q    P    D  T W  P   DR AVMFTSGTTGDPKGVE+TQANYAF G  MA AAGL   DRQLVVLP+FH NAQYYSFASAIW GASV L+  FSASGF+P A R  AT ASLFAAP+RMILA+ A  E L LRHCW+AQN++ + Y   +   GCRPRQLYGMTETIPAVLTD +E P P  MG  T  C
Sbjct:   93 SDPLGSVAELEGHIRRTGPVVGVCASQRSDVYQQAC------------------------GGIQAVQVDEQDPGLPSLLGDPFTSWSQPGPTDRAAVMFTSGTTGDPKGVEVTQANYAFAGRTMALAAGLDETDRQLVVLPMFHVNAQYYSFASAIWVGASVALMPSFSASGFLPQAARYGATAASLFAAPLRMILARGASVEGLRLRHCWYAQNITADQYSMVSEWFGCRPRQLYGMTETIPAVLTDETEDPEPSSMGRVTAGC 333          
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A6B1E9G1_9ACTN (ATP-dependent acyl-CoA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1E9G1_9ACTN)

HSP 1 Score: 263 bits (673), Expect = 5.770e-82
Identity = 151/264 (57.20%), Postives = 169/264 (64.02%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            SDP     ELA H  RT P +G+    RA  YR A       +  P++ +DE+    A      AA   A   P PG            LRDR AVMFTSGTTG PKGVE+TQANYAF G VMA+AAGL  DDRQLVVLPLFHANAQYYSFASAIWAGASV L+  FSASGF+P+A R  AT ASLFAAPIRMILA+        LRHCW+AQN+S + Y   A   GCRPRQLYGMTETIPAVLTD +  P    MG  +P C
Sbjct:   76 SDPMGRAPELAGHIERTGPAVGLCAGARAGTYRAAVDEAGRPDL-PVIEIDEADTALAL---FDAAPLAASQRPAPG------------LRDRAAVMFTSGTTGRPKGVEVTQANYAFAGKVMADAAGLTGDDRQLVVLPLFHANAQYYSFASAIWAGASVALMPAFSASGFLPAAARHSATCASLFAAPIRMILARGRPAAGARLRHCWYAQNISADQYSTVAQWFGCRPRQLYGMTETIPAVLTDEAADPHHASMGRVSPGC 323          
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A381ZKG9_9ZZZZ (Uncharacterized protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381ZKG9_9ZZZZ)

HSP 1 Score: 261 bits (666), Expect = 4.690e-81
Identity = 147/264 (55.68%), Postives = 167/264 (63.26%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            SDP   V ELA H  RTRP++G   + RA+VYRKA        S  +V +DES       G+                 D    WPVP   DR AVMFTSGTTG PKGVE+TQANYAFTG  MAEAA L   DRQLVVLPLFHANAQYYSFA A+W G SV L+  FSAS F+  A R EAT ASLFAAPIRMIL++    E L LRHCWFAQN++ + Y       GC+PRQLYGMTET+PAVLTD ++ P P  MG  T  C
Sbjct:   76 SDPMGGVDELAGHIARTRPMVGFCASTRAEVYRKACG------SIGVVEIDESAVDLDVMGT-----------------DPFDAWPVPGPTDRAAVMFTSGTTGMPKGVEVTQANYAFTGQTMAEAAELGVTDRQLVVLPLFHANAQYYSFAPAVWVGGSVALMSSFSASRFLTQAARHEATAASLFAAPIRMILSRGGPVEGLQLRHCWFAQNITQDQYGTVTEWFGCQPRQLYGMTETMPAVLTDEADQPDPSSMGRITDRC 316          
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Match: A0A6B1B327_9ACTN (ATP-dependent acyl-CoA ligase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1B327_9ACTN)

HSP 1 Score: 261 bits (668), Expect = 5.850e-81
Identity = 149/264 (56.44%), Postives = 168/264 (63.64%), Query Frame = 1
Query:    1 SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGVDESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTSGTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYSFASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTADGETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSEHPRPDVMGTPTPPC 792
            +DP     E A    RT P +G   T R+  YR   A      S P V    +  P  A   +   +T A  T +P A  E T W  PE  D  AVMFTSGTTG PKGV +TQANYAF G +MA+AA L  +DRQLVVLPLFHANAQYYSFASAIW GASV L+H FSASGF+P A R +AT ASLFAAP+RMILA+    + L LRHCWFAQNL+ + Y       GCRPRQLYGMTETIPAVLTD    PRPD MG  T  C
Sbjct:   93 ADPMGKEPEFAEQIERTSPTVGFCSTSRSAQYRAGVANAAAVASVPAVLAGSA--PPEAMTVIEIDETDA--TFEPFAETEFTAWATPEPTDLAAVMFTSGTTGRPKGVSVTQANYAFAGKIMAQAADLTPEDRQLVVLPLFHANAQYYSFASAIWTGASVALMHTFSASGFLPQAARHQATCASLFAAPLRMILARGGPVQGLKLRHCWFAQNLADDQYQTICDWFGCRPRQLYGMTETIPAVLTDGPGDPRPDSMGFVTAGC 352          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90175.20898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y3A8U6_9ACTN7.300e-8759.47AMP-binding protein n=1 Tax=Acidimicrobiia bacteri... [more]
A0A6G2KPL8_9ACTN1.060e-8658.71ATP-dependent acyl-CoA ligase n=5 Tax=Acidimicrobi... [more]
A0A7K2CTB9_9ACTN2.170e-8558.33ATP-dependent acyl-CoA ligase n=1 Tax=Acidimicrobi... [more]
A0A4R7I428_9ACTN5.650e-8557.25Crotonobetaine/carnitine-CoA ligase n=1 Tax=Ilumat... [more]
A0A848UB97_9ACTN4.240e-8458.71AMP-binding protein n=1 Tax=Ilumatobacter sp. TaxI... [more]
A0A2E4MRQ0_9BACT1.520e-8356.98Acyl-CoA synthetase n=2 Tax=Bacteria TaxID=2 RepID... [more]
A0A2E8DDS2_9ACTN3.570e-8256.23Acyl-CoA synthetase n=1 Tax=Acidimicrobiaceae bact... [more]
A0A6B1E9G1_9ACTN5.770e-8257.20ATP-dependent acyl-CoA ligase n=2 Tax=Acidimicrobi... [more]
A0A381ZKG9_9ZZZZ4.690e-8155.68Uncharacterized protein (Fragment) n=1 Tax=marine ... [more]
A0A6B1B327_9ACTN5.850e-8156.44ATP-dependent acyl-CoA ligase n=1 Tax=Acidimicrobi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90175contigM-pyrifera_M_contig90175:3..794 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score263.1
Seed ortholog evalue1.4e-67
Seed eggNOG ortholog1313172.YM304_42230
KEGG koko:K02182
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM AMP-dependent synthetase and ligase
EggNOG OGs2GIUC@201174,COG0318@1,COG0318@2
EC6.2.1.48
COG Functional cat.IQ
Best tax levelActinobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000
Exons1
Model size792
Cds size792
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816812.8818-CDS-M-pyrifera_M_contig90175:2..7941622816812.8818-CDS-M-pyrifera_M_contig90175:2..794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90175 3..794 +
1692278193.3721771-CDS-M-pyrifera_M_contig90175:2..7941692278193.3721771-CDS-M-pyrifera_M_contig90175:2..794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90175 3..794 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90175.20898.1prot_M-pyrifera_M_contig90175.20898.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90175 3..794 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90175.20898.1

>prot_M-pyrifera_M_contig90175.20898.1 ID=prot_M-pyrifera_M_contig90175.20898.1|Name=mRNA_M-pyrifera_M_contig90175.20898.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp
SDPASSVSELAHHRTRTRPVIGVYGTDRADVYRKAAATGPHAESGPIVGV
DESQFPAAAAGSLIAAQTKAQMTPKPGARDESTRWPVPELRDRLAVMFTS
GTTGDPKGVEITQANYAFTGMVMAEAAGLAADDRQLVVLPLFHANAQYYS
FASAIWAGASVGLVHRFSASGFVPSARRLEATHASLFAAPIRMILAKTAD
GETLSLRHCWFAQNLSTEHYDRFATLAGCRPRQLYGMTETIPAVLTDRSE
HPRPDVMGTPTPPC
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mRNA from alignment at M-pyrifera_M_contig90175:3..794+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90175.20898.1 ID=mRNA_M-pyrifera_M_contig90175.20898.1|Name=mRNA_M-pyrifera_M_contig90175.20898.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig90175:3..794+ (Macrocystis pyrifera P11B4 male)
TCCGATCCGGCCTCTTCGGTGTCGGAGCTTGCCCACCACCGAACCAGGAC CCGGCCTGTGATCGGTGTGTACGGCACCGATCGTGCCGACGTCTACCGCA AGGCGGCGGCCACCGGACCACACGCCGAGTCCGGGCCGATCGTCGGAGTC GACGAATCACAGTTCCCGGCGGCGGCTGCCGGCTCGTTGATCGCCGCCCA GACCAAGGCACAGATGACGCCGAAGCCCGGCGCCCGCGACGAGAGCACCC GCTGGCCTGTTCCCGAGTTGCGAGATCGACTCGCCGTCATGTTCACCAGT GGGACGACCGGCGACCCCAAGGGCGTCGAGATCACCCAGGCGAACTACGC CTTCACCGGCATGGTCATGGCCGAGGCTGCCGGCCTCGCCGCCGACGATC GTCAGCTCGTGGTGCTTCCGCTCTTCCACGCCAACGCCCAGTACTACTCC TTTGCCTCGGCCATCTGGGCCGGTGCCAGCGTCGGCCTCGTGCACCGGTT CTCGGCCAGCGGCTTCGTGCCATCGGCCCGACGGCTGGAGGCGACACATG CCTCGCTGTTCGCCGCCCCGATCCGGATGATCTTGGCCAAGACCGCTGAC GGCGAGACGCTCTCGCTCCGCCACTGCTGGTTCGCCCAGAACCTGAGCAC CGAGCACTACGACCGGTTTGCCACACTCGCCGGGTGTCGTCCTCGTCAGC TCTATGGGATGACCGAGACCATCCCGGCCGTCCTCACCGATCGCTCCGAG CACCCACGACCCGACGTGATGGGGACCCCCACGCCGCCGTGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90175:3..794+

>mRNA_M-pyrifera_M_contig90175.20898.1 ID=mRNA_M-pyrifera_M_contig90175.20898.1|Name=mRNA_M-pyrifera_M_contig90175.20898.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig90175:3..794+ (Macrocystis pyrifera P11B4 male)
TCCGATCCGGCCTCTTCGGTGTCGGAGCTTGCCCACCACCGAACCAGGAC
CCGGCCTGTGATCGGTGTGTACGGCACCGATCGTGCCGACGTCTACCGCA
AGGCGGCGGCCACCGGACCACACGCCGAGTCCGGGCCGATCGTCGGAGTC
GACGAATCACAGTTCCCGGCGGCGGCTGCCGGCTCGTTGATCGCCGCCCA
GACCAAGGCACAGATGACGCCGAAGCCCGGCGCCCGCGACGAGAGCACCC
GCTGGCCTGTTCCCGAGTTGCGAGATCGACTCGCCGTCATGTTCACCAGT
GGGACGACCGGCGACCCCAAGGGCGTCGAGATCACCCAGGCGAACTACGC
CTTCACCGGCATGGTCATGGCCGAGGCTGCCGGCCTCGCCGCCGACGATC
GTCAGCTCGTGGTGCTTCCGCTCTTCCACGCCAACGCCCAGTACTACTCC
TTTGCCTCGGCCATCTGGGCCGGTGCCAGCGTCGGCCTCGTGCACCGGTT
CTCGGCCAGCGGCTTCGTGCCATCGGCCCGACGGCTGGAGGCGACACATG
CCTCGCTGTTCGCCGCCCCGATCCGGATGATCTTGGCCAAGACCGCTGAC
GGCGAGACGCTCTCGCTCCGCCACTGCTGGTTCGCCCAGAACCTGAGCAC
CGAGCACTACGACCGGTTTGCCACACTCGCCGGGTGTCGTCCTCGTCAGC
TCTATGGGATGACCGAGACCATCCCGGCCGTCCTCACCGATCGCTCCGAG
CACCCACGACCCGACGTGATGGGGACCCCCACGCCGCCGTGCTCCGATCC
GGCCTCTTCGGTGTCGGAGCTTGCCCACCACCGAACCAGGACCCGGCCTG
TGATCGGTGTGTACGGCACCGATCGTGCCGACGTCTACCGCAAGGCGGCG
GCCACCGGACCACACGCCGAGTCCGGGCCGATCGTCGGAGTCGACGAATC
ACAGTTCCCGGCGGCGGCTGCCGGCTCGTTGATCGCCGCCCAGACCAAGG
CACAGATGACGCCGAAGCCCGGCGCCCGCGACGAGAGCACCCGCTGGCCT
GTTCCCGAGTTGCGAGATCGACTCGCCGTCATGTTCACCAGTGGGACGAC
CGGCGACCCCAAGGGCGTCGAGATCACCCAGGCGAACTACGCCTTCACCG
GCATGGTCATGGCCGAGGCTGCCGGCCTCGCCGCCGACGATCGTCAGCTC
GTGGTGCTTCCGCTCTTCCACGCCAACGCCCAGTACTACTCCTTTGCCTC
GGCCATCTGGGCCGGTGCCAGCGTCGGCCTCGTGCACCGGTTCTCGGCCA
GCGGCTTCGTGCCATCGGCCCGACGGCTGGAGGCGACACATGCCTCGCTG
TTCGCCGCCCCGATCCGGATGATCTTGGCCAAGACCGCTGACGGCGAGAC
GCTCTCGCTCCGCCACTGCTGGTTCGCCCAGAACCTGAGCACCGAGCACT
ACGACCGGTTTGCCACACTCGCCGGGTGTCGTCCTCGTCAGCTCTATGGG
ATGACCGAGACCATCCCGGCCGTCCTCACCGATCGCTCCGAGCACCCACG
ACCCGACGTGATGGGGACCCCCACGCCGCCGTGC
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