mRNA_M-pyrifera_M_contig90173.20896.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90173.20896.1
Unique NamemRNA_M-pyrifera_M_contig90173.20896.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: A0A3C1KL41_9GAMM (Histidine kinase n=5 Tax=Halieaceae TaxID=1706372 RepID=A0A3C1KL41_9GAMM)

HSP 1 Score: 507 bits (1306), Expect = 1.270e-178
Identity = 259/264 (98.11%), Postives = 261/264 (98.86%), Query Frame = 1
Query:    1 HPVLRSAAAPESPITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKYT 792
            HPVLRSAAAPESP+TAFEEGYRYANF GFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYA+PP ELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHT DLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKYT
Sbjct:   79 HPVLRSAAAPESPVTAFEEGYRYANFDGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYADPPTELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTTDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKYT 342          
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: A0A359EP16_9GAMM (Sensor histidine kinase (Fragment) n=1 Tax=Halieaceae bacterium TaxID=2026743 RepID=A0A359EP16_9GAMM)

HSP 1 Score: 488 bits (1257), Expect = 8.400e-173
Identity = 250/254 (98.43%), Postives = 252/254 (99.21%), Query Frame = 1
Query:    1 HPVLRSAAAPESPITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIR 762
            HPVLRSAAAPESP+TAFEEGYRYANF GFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYA+PPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFH IDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIR
Sbjct:   79 HPVLRSAAAPESPVTAFEEGYRYANFDGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYADPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHAIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIR 332          
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: A0A2E7C5K5_9GAMM (Histidine kinase n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C5K5_9GAMM)

HSP 1 Score: 462 bits (1190), Expect = 5.500e-161
Identity = 235/263 (89.35%), Postives = 247/263 (93.92%), Query Frame = 1
Query:    4 PVLRSAAAPESPITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKYT 792
            PVLRSAAAP++PI AF  GYRYANFGG+RWRTLTV+MG QRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELS QINRKA+DDL PL   +PP ELQQVI+STNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLE+EVPAGSSALQHA EGIERMHHLVEQLLDLARTQPELI ANF T+DLHTLAQRVTAE+WPAFE+R QSLSLQGE A MQGDETMLAIL+RNLLDNARKYT
Sbjct:   80 PVLRSAAAPDAPIAAFAAGYRYANFGGYRWRTLTVAMGDQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSEQINRKATDDLTPLPDTDPPTELQQVITSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLENEVPAGSSALQHATEGIERMHHLVEQLLDLARTQPELIKANFQTVDLHTLAQRVTAEMWPAFESRHQSLSLQGESAVMQGDETMLAILLRNLLDNARKYT 342          
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: A0A2D5F8Q1_9GAMM (Histidine kinase n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5F8Q1_9GAMM)

HSP 1 Score: 355 bits (912), Expect = 8.960e-119
Identity = 179/264 (67.80%), Postives = 210/264 (79.55%), Query Frame = 1
Query:    1 HPVLRSAAAPESPITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKYT 792
            H  L+S  AP  P+ AF  G  Y NF G+RWRTLT      RW MV ERAD+RH +AE VVLE+V+PLLLWLPVAA LIWV+VGWGLAPLR+LSA INRKASDDL+PL  + PP EL  ++++TN LLLRLA ALQRE+ FA+HAAHELRTPIS LK+HLHNL  E+PA S AL+HAN G+ERM HLVEQ+LDL+RTQP+LI ANF  +DLH LA++VTA+LWPAF ARQQSLSL G+P  + GD  ML IL+RNLLDNA KYT
Sbjct:   79 HLQLQSPGAPAEPVAAFAPGLDYHNFAGYRWRTLTEEDSRGRWLMVGERADLRHLIAEQVVLEAVVPLLLWLPVAAGLIWVVVGWGLAPLRQLSAAINRKASDDLSPLSISAPPVELAPLVAATNALLLRLAGALQREQQFAAHAAHELRTPISVLKVHLHNLAQELPADSEALRHANAGVERMQHLVEQILDLSRTQPDLIQANFQGLDLHALARQVTADLWPAFAARQQSLSLAGKPTQVLGDPAMLDILLRNLLDNAGKYT 342          
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: A0A3L7DZ30_9GAMM (Histidine kinase n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A3L7DZ30_9GAMM)

HSP 1 Score: 336 bits (862), Expect = 3.110e-111
Identity = 168/259 (64.86%), Postives = 201/259 (77.61%), Query Frame = 1
Query:   16 SAAAPESPITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKYT 792
            S  AP +PI  F EGYRY NF G+RW + T         +VAERAD+RHT+AE+VVLESV+PLLLWLPV+A+L+W+LVGWGL PL +LS QIN + SDDLAP+    PPAEL+Q+I STN LL RLAAA +REKHFA+HAAHELRTP+S LK+HLHNL  E+PA   AL HAN G+ERMHHLVEQ+LDL+RT PELI  NF  IDLH+LAQRVTA+ WP F AR Q LSL+G+ A ++GD  +L  L+ NLLDNA KYT
Sbjct:   84 SPGAPAAPIAEFSEGYRYGNFSGYRWLSYTQFAPDGTAYIVAERADLRHTVAENVVLESVLPLLLWLPVSAVLVWLLVGWGLRPLYDLSRQINARRSDDLAPVALHNPPAELRQLIESTNSLLARLAAAFEREKHFAAHAAHELRTPLSVLKVHLHNLAEELPADEPALAHANAGVERMHHLVEQILDLSRTNPELIVGNFQDIDLHSLAQRVTADAWPQFAARNQVLSLEGDEARLRGDPALLETLLCNLLDNAGKYT 342          
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: A0A4R5LNE0_9GAMM (Histidine kinase n=1 Tax=Seongchinamella unica TaxID=2547392 RepID=A0A4R5LNE0_9GAMM)

HSP 1 Score: 335 bits (858), Expect = 1.210e-110
Identity = 166/259 (64.09%), Postives = 199/259 (76.83%), Query Frame = 1
Query:   16 SAAAPESPITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKYT 792
            S  AP +PI  F EGYRY NF G+RW + T   G     MVAERAD+RHT+AE VVLESV+PLLLWLPV+A+L+W+LVGWGL PL ELS QIN + SDDLAP+    PP EL ++I STN LL RL+AA +REKHFA+HAAHELRTP+S LK+HLHNL  E+PA   AL HAN G+ERMHHLVEQ+LDL+RT PELI ANF  +DLH+LAQR+TAE WP F  +   LSL+G+ A ++GD  +L  L+ NLLDNARKYT
Sbjct:   84 SPGAPVAPIGDFSEGYRYGNFSGYRWLSYTRLAGDGTAYMVAERADLRHTVAEKVVLESVVPLLLWLPVSAVLVWLLVGWGLRPLHELSRQINTRRSDDLAPVTLDNPPVELLRLIDSTNSLLARLSAAFEREKHFAAHAAHELRTPLSVLKVHLHNLAEELPADEPALIHANAGVERMHHLVEQVLDLSRTNPELIVANFQDVDLHSLAQRITAEAWPQFAEKNLGLSLEGDEAILRGDPALLETLLGNLLDNARKYT 342          
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: A0A2N5X3C7_9GAMM (Histidine kinase n=1 Tax=Pseudohalioglobus lutimaris TaxID=1737061 RepID=A0A2N5X3C7_9GAMM)

HSP 1 Score: 334 bits (857), Expect = 1.520e-110
Identity = 165/261 (63.22%), Postives = 200/261 (76.63%), Query Frame = 1
Query:    7 VLRSAAAPESPITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKY 789
            +L S  +P +PI  F EGYRYANF G+RWRT T+    +   +VAERAD+RH +AE VVLESV+PLLLWLPV+ALL+W+LVGWGL PLRELS QIN + SDDL+P+    PP EL Q+I STN L  RLAAA +REK FASHAAHELRTP+S LK+HLHN+ +++P G+ AL+HAN G+ERMHHLVEQ+LDL+RT PELI A F  +DLH+L QRVTA  WP F  + Q LSL+G PA M GD  +L  L+ NLLDNA KY
Sbjct:   81 LLASEGSPAAPIGDFSEGYRYANFSGYRWRTYTLQAENKTVFVVAERADLRHLVAEKVVLESVLPLLLWLPVSALLVWLLVGWGLRPLRELSNQINTRRSDDLSPVRVRRPPRELVQLIDSTNSLFARLAAAFEREKQFASHAAHELRTPLSVLKVHLHNIAADLPPGAPALEHANAGVERMHHLVEQILDLSRTHPELIQAKFSELDLHSLCQRVTAAAWPRFTGKAQVLSLEGSPAPMSGDPALLETLLGNLLDNAAKY 341          
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: A0A5C9A9D0_9GAMM (Histidine kinase n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A9D0_9GAMM)

HSP 1 Score: 328 bits (841), Expect = 1.130e-107
Identity = 169/262 (64.50%), Postives = 200/262 (76.34%), Query Frame = 1
Query:    7 VLRSAAAPES-PITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKY 789
            +L+ A  P S P+ +F+ G+ YANFGGFRWRTLTV+     W  VAERAD+R TLAE VV+ESV+PLL WLPVAA+LIW LVGWGLAPLR LS QINRKASDDL PL +  PP EL+ V+ STN LL RL++ALQRE+ FASHAAHELRTPIS LKIHLHNL  ++ A   +L H    ++RM HLVEQLLD++RTQPEL+  +F T++LH LA+RV A LWP F     SLSL GE  T+QGDE ML  L+RNLLDNARKY
Sbjct:  111 LLQHAGVPGSEPMASFDAGFDYANFGGFRWRTLTVAGADGTWYQVAERADLRFTLAERVVMESVLPLLTWLPVAAVLIWFLVGWGLAPLRSLSQQINRKASDDLEPLVFPTPPVELRPVVGSTNALLARLSSALQRERDFASHAAHELRTPISGLKIHLHNLSQDLSADHPSLCHIRADVDRMQHLVEQLLDISRTQPELMRGHFATVNLHALAERVAASLWPLFSEAGLSLSLGGEDCTVQGDEVMLDTLLRNLLDNARKY 372          
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: UPI0019FEB4EC (Sensor histidine kinase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FEB4EC)

HSP 1 Score: 326 bits (836), Expect = 2.660e-107
Identity = 165/257 (64.20%), Postives = 195/257 (75.88%), Query Frame = 1
Query:   31 ESPITAFE---EGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKYT 792
            ESPI A E   EGYR AN+ G+RWR LT       W +VAER D+R+ LAE V LES+ PLLLWLP++ALLIWVLVGWGL PLR LS QIN K SDDL P+   EPPAEL Q+I STN LL RL+A+ +REKHFA+HAAHELRTP+S LK+HLHNL  E+P     L HAN G+ERMHHLVEQ+LDL RT P++I   F TIDLH+LAQRVTA  WPAF  + Q++SL GE  +MQGDE++L  L++NLLDNA KYT
Sbjct:   86 ESPIYALESLKEGYRDANYAGYRWRILTRRTASDHWYVVAERMDLRNALAEKVALESITPLLLWLPISALLIWVLVGWGLRPLRNLSRQINMKRSDDLEPIYEHEPPAELIQLIDSTNSLLARLSASFEREKHFAAHAAHELRTPLSVLKVHLHNLAEELPEQHPGLAHANAGVERMHHLVEQILDLNRTNPDIIQGMFKTIDLHSLAQRVTAAAWPAFSRKAQTISLDGEAVSMQGDESLLETLLQNLLDNASKYT 342          
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Match: A0A5C9A5V6_9GAMM (Histidine kinase n=1 Tax=Parahaliea aestuarii TaxID=1852021 RepID=A0A5C9A5V6_9GAMM)

HSP 1 Score: 323 bits (829), Expect = 3.040e-106
Identity = 165/259 (63.71%), Postives = 194/259 (74.90%), Query Frame = 1
Query:   13 RSAAAPESPITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERADVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRKASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELRTPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPELITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLAILIRNLLDNARKY 789
            R+  + E  +  F  GY YANF GFRWRTLTV+     W  VAERAD+R+TLAE VVL S++PLL WLPVAA+LIW LVGWGLAPLR LS QINRKASDDL PL +  PPAELQQ++ STN LL RL++ALQRE+ FASHAAHELRTPIS LKIHLHNL  ++PA   +L H    + RM HLVEQ+LDL+RTQPEL+   F ++DLH+LA+RV+A LWP F     SLSL G    + GDE ML  L+RNLLDNARKY
Sbjct:   82 RAGISGEQAMARFAPGYDYANFDGFRWRTLTVAGADDTWYQVAERADLRYTLAERVVLASILPLLTWLPVAAILIWFLVGWGLAPLRALSQQINRKASDDLEPLVFPAPPAELQQLVHSTNALLARLSSALQRERDFASHAAHELRTPISGLKIHLHNLSQDLPANHPSLAHTRADVSRMQHLVEQVLDLSRTQPELMRGQFDSVDLHSLAERVSASLWPVFTEAGLSLSLGGGSCVVAGDEGMLDTLLRNLLDNARKY 340          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90173.20896.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C1KL41_9GAMM1.270e-17898.11Histidine kinase n=5 Tax=Halieaceae TaxID=1706372 ... [more]
A0A359EP16_9GAMM8.400e-17398.43Sensor histidine kinase (Fragment) n=1 Tax=Halieac... [more]
A0A2E7C5K5_9GAMM5.500e-16189.35Histidine kinase n=1 Tax=Haliea sp. TaxID=1932666 ... [more]
A0A2D5F8Q1_9GAMM8.960e-11967.80Histidine kinase n=1 Tax=Haliea sp. TaxID=1932666 ... [more]
A0A3L7DZ30_9GAMM3.110e-11164.86Histidine kinase n=2 Tax=Proteobacteria TaxID=1224... [more]
A0A4R5LNE0_9GAMM1.210e-11064.09Histidine kinase n=1 Tax=Seongchinamella unica Tax... [more]
A0A2N5X3C7_9GAMM1.520e-11063.22Histidine kinase n=1 Tax=Pseudohalioglobus lutimar... [more]
A0A5C9A9D0_9GAMM1.130e-10764.50Histidine kinase n=1 Tax=Parahaliea maris TaxID=27... [more]
UPI0019FEB4EC2.660e-10764.20Sensor histidine kinase n=1 Tax=Proteobacteria bac... [more]
A0A5C9A5V6_9GAMM3.040e-10663.71Histidine kinase n=1 Tax=Parahaliea aestuarii TaxI... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90173contigM-pyrifera_M_contig90173:3..794 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score510.4
Seed ortholog evalue5.1e-142
Seed eggNOG ortholog1121937.AUHJ01000001_gene528
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.PhoQ Sensor
EggNOG OGs1N1Z2@1224,1RPG9@1236,467GZ@72275,COG0642@1,COG2205@2
COG Functional cat.T
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size792
Cds size792
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816812.8133419-CDS-M-pyrifera_M_contig90173:2..7941622816812.8133419-CDS-M-pyrifera_M_contig90173:2..794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90173 3..794 -
1692278193.3381658-CDS-M-pyrifera_M_contig90173:2..7941692278193.3381658-CDS-M-pyrifera_M_contig90173:2..794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90173 3..794 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90173.20896.1prot_M-pyrifera_M_contig90173.20896.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90173 3..794 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90173.20896.1

>prot_M-pyrifera_M_contig90173.20896.1 ID=prot_M-pyrifera_M_contig90173.20896.1|Name=mRNA_M-pyrifera_M_contig90173.20896.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=264bp
HPVLRSAAAPESPITAFEEGYRYANFGGFRWRTLTVSMGGQRWGMVAERA
DVRHTLAESVVLESVIPLLLWLPVAALLIWVLVGWGLAPLRELSAQINRK
ASDDLAPLDYAEPPAELQQVISSTNGLLLRLAAALQREKHFASHAAHELR
TPISALKIHLHNLESEVPAGSSALQHANEGIERMHHLVEQLLDLARTQPE
LITANFHTIDLHTLAQRVTAELWPAFEARQQSLSLQGEPATMQGDETMLA
ILIRNLLDNARKYT
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mRNA from alignment at M-pyrifera_M_contig90173:3..794-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90173.20896.1 ID=mRNA_M-pyrifera_M_contig90173.20896.1|Name=mRNA_M-pyrifera_M_contig90173.20896.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig90173:3..794- (Macrocystis pyrifera P11B4 male)
CACCCCGTGTTGCGCTCGGCTGCGGCACCGGAGTCGCCTATTACCGCGTT CGAGGAGGGCTATCGCTATGCCAATTTCGGCGGCTTTCGCTGGCGCACCC TGACCGTATCGATGGGCGGGCAGCGCTGGGGAATGGTGGCAGAGCGCGCG GATGTTCGCCACACCCTGGCGGAGAGCGTTGTGTTGGAGTCGGTCATCCC CCTGCTGCTCTGGCTGCCGGTTGCGGCACTGCTGATCTGGGTGCTGGTGG GTTGGGGCCTTGCACCTCTGCGCGAACTCAGTGCGCAGATCAATCGCAAG GCGAGTGATGACCTGGCGCCCCTGGACTACGCGGAGCCGCCGGCCGAGCT GCAGCAGGTTATCAGCTCTACCAATGGGCTTCTGCTGCGCCTGGCAGCTG CACTGCAGCGGGAAAAACATTTCGCTTCCCATGCCGCGCATGAATTGCGC ACGCCCATCAGCGCGCTGAAGATTCATCTGCACAATCTGGAAAGCGAGGT TCCTGCAGGAAGCAGTGCCCTGCAGCATGCCAACGAGGGCATCGAACGCA TGCATCACCTGGTCGAACAGCTGCTGGACCTTGCGCGCACACAGCCGGAA TTGATCACGGCGAACTTTCACACCATTGACCTGCACACATTGGCACAGCG GGTAACGGCAGAATTGTGGCCGGCATTCGAGGCGCGTCAGCAGTCGCTCT CCCTGCAGGGCGAGCCGGCGACGATGCAGGGTGATGAAACCATGCTCGCC ATTCTTATACGCAACCTGCTCGATAACGCGCGTAAATATACC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90173:3..794-

>mRNA_M-pyrifera_M_contig90173.20896.1 ID=mRNA_M-pyrifera_M_contig90173.20896.1|Name=mRNA_M-pyrifera_M_contig90173.20896.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1584bp|location=Sequence derived from alignment at M-pyrifera_M_contig90173:3..794- (Macrocystis pyrifera P11B4 male)
CACCCCGTGTTGCGCTCGGCTGCGGCACCGGAGTCGCCTATTACCGCGTT
CGAGGAGGGCTATCGCTATGCCAATTTCGGCGGCTTTCGCTGGCGCACCC
TGACCGTATCGATGGGCGGGCAGCGCTGGGGAATGGTGGCAGAGCGCGCG
GATGTTCGCCACACCCTGGCGGAGAGCGTTGTGTTGGAGTCGGTCATCCC
CCTGCTGCTCTGGCTGCCGGTTGCGGCACTGCTGATCTGGGTGCTGGTGG
GTTGGGGCCTTGCACCTCTGCGCGAACTCAGTGCGCAGATCAATCGCAAG
GCGAGTGATGACCTGGCGCCCCTGGACTACGCGGAGCCGCCGGCCGAGCT
GCAGCAGGTTATCAGCTCTACCAATGGGCTTCTGCTGCGCCTGGCAGCTG
CACTGCAGCGGGAAAAACATTTCGCTTCCCATGCCGCGCATGAATTGCGC
ACGCCCATCAGCGCGCTGAAGATTCATCTGCACAATCTGGAAAGCGAGGT
TCCTGCAGGAAGCAGTGCCCTGCAGCATGCCAACGAGGGCATCGAACGCA
TGCATCACCTGGTCGAACAGCTGCTGGACCTTGCGCGCACACAGCCGGAA
TTGATCACGGCGAACTTTCACACCATTGACCTGCACACATTGGCACAGCG
GGTAACGGCAGAATTGTGGCCGGCATTCGAGGCGCGTCAGCAGTCGCTCT
CCCTGCAGGGCGAGCCGGCGACGATGCAGGGTGATGAAACCATGCTCGCC
ATTCTTATACGCAACCTGCTCGATAACGCGCGTAAATATACCCACCCCGT
GTTGCGCTCGGCTGCGGCACCGGAGTCGCCTATTACCGCGTTCGAGGAGG
GCTATCGCTATGCCAATTTCGGCGGCTTTCGCTGGCGCACCCTGACCGTA
TCGATGGGCGGGCAGCGCTGGGGAATGGTGGCAGAGCGCGCGGATGTTCG
CCACACCCTGGCGGAGAGCGTTGTGTTGGAGTCGGTCATCCCCCTGCTGC
TCTGGCTGCCGGTTGCGGCACTGCTGATCTGGGTGCTGGTGGGTTGGGGC
CTTGCACCTCTGCGCGAACTCAGTGCGCAGATCAATCGCAAGGCGAGTGA
TGACCTGGCGCCCCTGGACTACGCGGAGCCGCCGGCCGAGCTGCAGCAGG
TTATCAGCTCTACCAATGGGCTTCTGCTGCGCCTGGCAGCTGCACTGCAG
CGGGAAAAACATTTCGCTTCCCATGCCGCGCATGAATTGCGCACGCCCAT
CAGCGCGCTGAAGATTCATCTGCACAATCTGGAAAGCGAGGTTCCTGCAG
GAAGCAGTGCCCTGCAGCATGCCAACGAGGGCATCGAACGCATGCATCAC
CTGGTCGAACAGCTGCTGGACCTTGCGCGCACACAGCCGGAATTGATCAC
GGCGAACTTTCACACCATTGACCTGCACACATTGGCACAGCGGGTAACGG
CAGAATTGTGGCCGGCATTCGAGGCGCGTCAGCAGTCGCTCTCCCTGCAG
GGCGAGCCGGCGACGATGCAGGGTGATGAAACCATGCTCGCCATTCTTAT
ACGCAACCTGCTCGATAACGCGCGTAAATATACC
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