prot_M-pyrifera_M_contig90172.20894.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig90172.20894.1
Unique Name	prot_M-pyrifera_M_contig90172.20894.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	113

Homology

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BLAST of mRNA_M-pyrifera_M_contig90172.20894.1 vs. uniprot
Match: UPI0003812ABE (glycosyltransferase n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI0003812ABE)

HSP 1 Score: 104 bits (259), Expect = 2.070e-24
Identity = 52/111 (46.85%), Postives = 75/111 (67.57%), Query Frame = 0

Query:    1 QQRRWLRGGFESQWSFKIWLALGFGFHFSISLLFLTGLFFSLQTSLFVLALKFLSDLFMLTSQKILLRKKNILRYFPIQFVYILLIMIWLPASVVINSKISWKGEGYEIKY 111
            QQRRWL+GGFE  W + I L L FGFH  +S+LF+TGLF SL+T++  L +K  +D  +L S+K LL++  +LRY      +++  ++WLP S++INS I W G+ Y I Y
Sbjct:  240 QQRRWLKGGFEGSWKYWIGLVLAFGFHNVLSILFVTGLFVSLKTTMIALIIKTGADFLLLASEKTLLKEPKLLRYLFFMEFHLITTLLWLPISLLINSTIHWMGDDYVITY 350

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig90172.20894.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig90172.20894.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
UPI0003812ABE	2.070e-24	46.85	glycosyltransferase n=1 Tax=Balneola vulgaris TaxI...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 52..71
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 93..112
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 18..51
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..17
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 72..92
None	No IPR available	TMHMM	TMhelix		coord: 20..42
None	No IPR available	TMHMM	TMhelix		coord: 75..97

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig90172	contig	M-pyrifera_M_contig90172:2..340 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig90172.20894.1	mRNA_M-pyrifera_M_contig90172.20894.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig90172 2..340 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig90172.20894.1 ID=prot_M-pyrifera_M_contig90172.20894.1|Name=mRNA_M-pyrifera_M_contig90172.20894.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=113bp
QQRRWLRGGFESQWSFKIWLALGFGFHFSISLLFLTGLFFSLQTSLFVLA
LKFLSDLFMLTSQKILLRKKNILRYFPIQFVYILLIMIWLPASVVINSKI
SWKGEGYEIKYE*