prot_M-pyrifera_M_contig90070.20880.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90070.20880.1
Unique Nameprot_M-pyrifera_M_contig90070.20880.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length98
Homology
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S1C9R4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9R4_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 1.860e-22
Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 0
Query:    6 AGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRASEALLFA 84
            AGRAW  +ELR KSF+DLH LWFV LKEKN LL++R ++ Q G   PD  RL+KV+ +MARI+VVLGER+RA  A L A
Sbjct:   30 AGRAWRTAELRLKSFDDLHKLWFVLLKEKNVLLTQRTYFKQTGLTMPDPYRLKKVKLSMARIQVVLGERRRARAAALDA 108          
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A5A8CIA3_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CIA3_CAFRO)

HSP 1 Score: 95.5 bits (236), Expect = 5.720e-22
Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 0
Query:    7 GRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRASEALLFA 84
            GR+W  +ELRGKSFEDLH LW+VCLKEKN L+++R++Y Q     PD  R+RKVRKTMARIK VL ER+ A +  + A
Sbjct:   32 GRSWRAAELRGKSFEDLHRLWWVCLKEKNALMTDRMYYNQVSVEMPDSSRVRKVRKTMARIKRVLSERKMAVDRAIAA 109          
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A812U425_9DINO (MRPL4 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812U425_9DINO)

HSP 1 Score: 93.2 bits (230), Expect = 9.520e-21
Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 0
Query:    8 RAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRASEALLFA 84
            R+W  +ELRGKSFEDLH LW+VCLKEKN L+++R++Y Q     PD  R+RKVRKTMARIK VL ER+ A +  + A
Sbjct:   81 RSWRAAELRGKSFEDLHRLWWVCLKEKNALMTDRMYYNQVSVEMPDSSRVRKVRKTMARIKRVLSERKMAVDRAIAA 157          
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S0W7Y5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W7Y5_9CRYP)

HSP 1 Score: 84.0 bits (206), Expect = 3.540e-18
Identity = 43/74 (58.11%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    3 FCRAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQR 76
            F   GRAW   ELR KSFEDLH LW++CLKE+N L  ER      G    +  R RK+RKTM+RIKVVLGER+R
Sbjct:   65 FPAVGRAWKAEELRQKSFEDLHKLWWICLKERNSLAGERHQARANGLVMMNPTRWRKIRKTMSRIKVVLGERRR 138          
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: L8GV09_ACACA (Mitochondrial 39S ribosomal protein L47 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GV09_ACACA)

HSP 1 Score: 80.5 bits (197), Expect = 3.050e-17
Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 0
Query:    6 AGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQ 75
            AGRAW  SELR KSFEDLH LWFV  KE+N LL+E++    EG+         KVR++MARIK+VLGERQ
Sbjct:   17 AGRAWKASELRLKSFEDLHKLWFVLQKERNLLLTEKMLAKSEGKQMXXXXXXXKVRQSMARIKLVLGERQ 86          
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S0UCY3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UCY3_HEMAN)

HSP 1 Score: 82.4 bits (202), Expect = 3.480e-17
Identity = 42/74 (56.76%), Postives = 50/74 (67.57%), Query Frame = 0
Query:    3 FCRAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQR 76
            F   GRAW   ELR KSF+DLH LW++CLKE+N L  ER      G    +  R RK+RKTM+RIKVVLGER+R
Sbjct:  110 FPAVGRAWKADELRQKSFDDLHKLWWICLKERNSLAGERHQARANGLVMMNPSRWRKIRKTMSRIKVVLGERRR 183          
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A2V3J3H1_9FLOR (39S ribosomal protein L47, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3H1_9FLOR)

HSP 1 Score: 80.5 bits (197), Expect = 5.750e-17
Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 0
Query:    5 RAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDG-IRLRKVRKTMARIKVVLGER------QRASEALLFAR 85
            R GRAW  SELR KS+EDLH LWF+ LKE+N LLSE+ W     R   +G   L KV+++MAR+K V+GER      +RA EALL  R
Sbjct:   55 RTGRAWRTSELRLKSYEDLHKLWFILLKERNILLSEKAWCKTNSRHWVNGPSNLYKVKRSMARLKGVVGERTRAYKAKRAKEALLAER 142          
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S0M160_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M160_9CRYP)

HSP 1 Score: 81.3 bits (199), Expect = 5.940e-17
Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 0
Query:    1 MAFCRAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRA 77
            M F   GRAW+ +ELR KSF+DLH LW+V LKE+N L +ER     +G    +  R RKVRK+MARIKVVLGER RA
Sbjct:  104 MTFPAVGRAWTAAELRLKSFDDLHKLWWVLLKERNSLATERAAARAKGLQLLNPRRWRKVRKSMARIKVVLGERSRA 180          
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S3CE46_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CE46_9CHLO)

HSP 1 Score: 80.1 bits (196), Expect = 1.410e-16
Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = 0
Query:    7 GRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGER---------QRASEALLFAR 85
            GRAW   ELR KSFEDLH LWFV LKEKN L+SER  +   G   P   R++KV+++MARIK VL ER         +R +EA+L A+
Sbjct:  108 GRAWEAKELRLKSFEDLHKLWFVLLKEKNVLVSERHRFNSRGLLMPQKQRIKKVKQSMARIKTVLRERALEMEDEEERREAEAILDAK 195          
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A0L0DJW8_THETB (Mitochondrial/chloroplast ribosomal protein L4/L29 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DJW8_THETB)

HSP 1 Score: 79.7 bits (195), Expect = 1.550e-16
Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 0
Query:    7 GRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRASEA--LLFARGELGKRQVQEKLD 98
            GRAWS SELR KS E+LH LWFV L+E+N+L SER     + R      RL K RK+MARIK +LGER +A E+  LL  +    KR++Q ++D
Sbjct:   73 GRAWSASELRLKSLEELHALWFVLLRERNKLNSEREAARSQVRPMAAPHRLEKTRKSMARIKRILGERSQAVESARLLLRQRADAKRELQSRID 166          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S1C9R4_9STRA1.860e-2262.03Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
A0A5A8CIA3_CAFRO5.720e-2260.26Uncharacterized protein n=4 Tax=Cafeteria roenberg... [more]
A0A812U425_9DINO9.520e-2159.74MRPL4 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=2... [more]
A0A7S0W7Y5_9CRYP3.540e-1858.11Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
L8GV09_ACACA3.050e-1760.00Mitochondrial 39S ribosomal protein L47 n=1 Tax=Ac... [more]
A0A7S0UCY3_HEMAN3.480e-1756.76Hypothetical protein n=1 Tax=Hemiselmis andersenii... [more]
A0A2V3J3H1_9FLOR5.750e-1753.4139S ribosomal protein L47, mitochondrial n=1 Tax=G... [more]
A0A7S0M160_9CRYP5.940e-1758.44Hypothetical protein (Fragment) n=1 Tax=Cryptomona... [more]
A0A7S3CE46_9CHLO1.410e-1652.27Hypothetical protein n=1 Tax=Chloropicon roscoffen... [more]
A0A0L0DJW8_THETB1.550e-1651.06Mitochondrial/chloroplast ribosomal protein L4/L29... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038340MRP-L47 superfamily, mitochondrialGENE3D1.20.1280.190coord: 2..84
e-value: 1.8E-24
score: 87.7
IPR010729Ribosomal protein L47, mitochondrialPFAMPF06984MRP-L47coord: 6..74
e-value: 2.0E-21
score: 75.9
IPR010729Ribosomal protein L47, mitochondrialPANTHERPTHR21183RIBOSOMAL PROTEIN L47, MITOCHONDRIAL-RELATEDcoord: 6..94
IPR036049Ribosomal protein L29/L35 superfamilySUPERFAMILY46561Ribosomal protein L29 (L29p)coord: 11..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90070contigM-pyrifera_M_contig90070:416..709 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90070.20880.1mRNA_M-pyrifera_M_contig90070.20880.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90070 416..709 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90070.20880.1 ID=prot_M-pyrifera_M_contig90070.20880.1|Name=mRNA_M-pyrifera_M_contig90070.20880.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp
MAFCRAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRF
PPDGIRLRKVRKTMARIKVVLGERQRASEALLFARGELGKRQVQEKLD
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038340MRP-L47_sf
IPR010729Ribosomal_L47_mit
IPR036049Ribosomal_L29/L35_sf