mRNA_M-pyrifera_M_contig90070.20880.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S1C9R4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1C9R4_9STRA) HSP 1 Score: 94.0 bits (232), Expect = 1.860e-22 Identity = 49/79 (62.03%), Postives = 60/79 (75.95%), Query Frame = 1 Query: 16 AGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRASEALLFA 252 AGRAW +ELR KSF+DLH LWFV LKEKN LL++R ++ Q G PD RL+KV+ +MARI+VVLGER+RA A L A Sbjct: 30 AGRAWRTAELRLKSFDDLHKLWFVLLKEKNVLLTQRTYFKQTGLTMPDPYRLKKVKLSMARIQVVLGERRRARAAALDA 108
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A5A8CIA3_CAFRO (Uncharacterized protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CIA3_CAFRO) HSP 1 Score: 95.5 bits (236), Expect = 5.720e-22 Identity = 47/78 (60.26%), Postives = 59/78 (75.64%), Query Frame = 1 Query: 19 GRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRASEALLFA 252 GR+W +ELRGKSFEDLH LW+VCLKEKN L+++R++Y Q PD R+RKVRKTMARIK VL ER+ A + + A Sbjct: 32 GRSWRAAELRGKSFEDLHRLWWVCLKEKNALMTDRMYYNQVSVEMPDSSRVRKVRKTMARIKRVLSERKMAVDRAIAA 109
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A812U425_9DINO (MRPL4 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812U425_9DINO) HSP 1 Score: 93.2 bits (230), Expect = 9.520e-21 Identity = 46/77 (59.74%), Postives = 58/77 (75.32%), Query Frame = 1 Query: 22 RAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRASEALLFA 252 R+W +ELRGKSFEDLH LW+VCLKEKN L+++R++Y Q PD R+RKVRKTMARIK VL ER+ A + + A Sbjct: 81 RSWRAAELRGKSFEDLHRLWWVCLKEKNALMTDRMYYNQVSVEMPDSSRVRKVRKTMARIKRVLSERKMAVDRAIAA 157
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S0W7Y5_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0W7Y5_9CRYP) HSP 1 Score: 84.0 bits (206), Expect = 3.540e-18 Identity = 43/74 (58.11%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 7 FCRAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQR 228 F GRAW ELR KSFEDLH LW++CLKE+N L ER G + R RK+RKTM+RIKVVLGER+R Sbjct: 65 FPAVGRAWKAEELRQKSFEDLHKLWWICLKERNSLAGERHQARANGLVMMNPTRWRKIRKTMSRIKVVLGERRR 138
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: L8GV09_ACACA (Mitochondrial 39S ribosomal protein L47 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GV09_ACACA) HSP 1 Score: 80.5 bits (197), Expect = 3.050e-17 Identity = 42/70 (60.00%), Postives = 50/70 (71.43%), Query Frame = 1 Query: 16 AGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQ 225 AGRAW SELR KSFEDLH LWFV KE+N LL+E++ EG+ KVR++MARIK+VLGERQ Sbjct: 17 AGRAWKASELRLKSFEDLHKLWFVLQKERNLLLTEKMLAKSEGKQMXXXXXXXKVRQSMARIKLVLGERQ 86
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S0UCY3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S0UCY3_HEMAN) HSP 1 Score: 82.4 bits (202), Expect = 3.480e-17 Identity = 42/74 (56.76%), Postives = 50/74 (67.57%), Query Frame = 1 Query: 7 FCRAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQR 228 F GRAW ELR KSF+DLH LW++CLKE+N L ER G + R RK+RKTM+RIKVVLGER+R Sbjct: 110 FPAVGRAWKADELRQKSFDDLHKLWWICLKERNSLAGERHQARANGLVMMNPSRWRKIRKTMSRIKVVLGERRR 183
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A2V3J3H1_9FLOR (39S ribosomal protein L47, mitochondrial n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3J3H1_9FLOR) HSP 1 Score: 80.5 bits (197), Expect = 5.750e-17 Identity = 47/88 (53.41%), Postives = 58/88 (65.91%), Query Frame = 1 Query: 13 RAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDG-IRLRKVRKTMARIKVVLGER------QRASEALLFAR 255 R GRAW SELR KS+EDLH LWF+ LKE+N LLSE+ W R +G L KV+++MAR+K V+GER +RA EALL R Sbjct: 55 RTGRAWRTSELRLKSYEDLHKLWFILLKERNILLSEKAWCKTNSRHWVNGPSNLYKVKRSMARLKGVVGERTRAYKAKRAKEALLAER 142
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S0M160_9CRYP (Hypothetical protein (Fragment) n=1 Tax=Cryptomonas curvata TaxID=233186 RepID=A0A7S0M160_9CRYP) HSP 1 Score: 81.3 bits (199), Expect = 5.940e-17 Identity = 45/77 (58.44%), Postives = 54/77 (70.13%), Query Frame = 1 Query: 1 MAFCRAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRA 231 M F GRAW+ +ELR KSF+DLH LW+V LKE+N L +ER +G + R RKVRK+MARIKVVLGER RA Sbjct: 104 MTFPAVGRAWTAAELRLKSFDDLHKLWWVLLKERNSLATERAAARAKGLQLLNPRRWRKVRKSMARIKVVLGERSRA 180
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A7S3CE46_9CHLO (Hypothetical protein n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3CE46_9CHLO) HSP 1 Score: 80.1 bits (196), Expect = 1.410e-16 Identity = 46/88 (52.27%), Postives = 57/88 (64.77%), Query Frame = 1 Query: 19 GRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGER---------QRASEALLFAR 255 GRAW ELR KSFEDLH LWFV LKEKN L+SER + G P R++KV+++MARIK VL ER +R +EA+L A+ Sbjct: 108 GRAWEAKELRLKSFEDLHKLWFVLLKEKNVLVSERHRFNSRGLLMPQKQRIKKVKQSMARIKTVLRERALEMEDEEERREAEAILDAK 195
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Match: A0A0L0DJW8_THETB (Mitochondrial/chloroplast ribosomal protein L4/L29 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DJW8_THETB) HSP 1 Score: 79.7 bits (195), Expect = 1.550e-16 Identity = 48/94 (51.06%), Postives = 62/94 (65.96%), Query Frame = 1 Query: 19 GRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFPPDGIRLRKVRKTMARIKVVLGERQRASEA--LLFARGELGKRQVQEKLD 294 GRAWS SELR KS E+LH LWFV L+E+N+L SER + R RL K RK+MARIK +LGER +A E+ LL + KR++Q ++D Sbjct: 73 GRAWSASELRLKSLEELHALWFVLLRERNKLNSEREAARSQVRPMAAPHRLEKTRKSMARIKRILGERSQAVESARLLLRQRADAKRELQSRID 166 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90070.20880.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig90070.20880.1 >prot_M-pyrifera_M_contig90070.20880.1 ID=prot_M-pyrifera_M_contig90070.20880.1|Name=mRNA_M-pyrifera_M_contig90070.20880.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=98bp MAFCRAGRAWSVSELRGKSFEDLHGLWFVCLKEKNRLLSERLWYAQEGRFback to top mRNA from alignment at M-pyrifera_M_contig90070:416..709- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig90070.20880.1 ID=mRNA_M-pyrifera_M_contig90070.20880.1|Name=mRNA_M-pyrifera_M_contig90070.20880.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=294bp|location=Sequence derived from alignment at M-pyrifera_M_contig90070:416..709- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig90070:416..709- >mRNA_M-pyrifera_M_contig90070.20880.1 ID=mRNA_M-pyrifera_M_contig90070.20880.1|Name=mRNA_M-pyrifera_M_contig90070.20880.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig90070:416..709- (Macrocystis pyrifera P11B4 male)back to top |