mRNA_M-pyrifera_M_contig90067.20879.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90067.20879.1
Unique NamemRNA_M-pyrifera_M_contig90067.20879.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A3D5DC19_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DC19_9GAMM)

HSP 1 Score: 429 bits (1104), Expect = 5.510e-148
Identity = 207/240 (86.25%), Postives = 221/240 (92.08%), Query Frame = 1
Query:    1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720
            PRK+ARTLTA QID ILP PPP DP P TPA++IDQFRGW WLA++LL YPLGHAIV  GFGTSWTINAYNITFLVLAL LHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLG+LF+D AT TTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAG+ LDVSVVTITLAYAYGDS+TNLIQPFFAIPILAVTRM+FGDVVGYT LVA A F VT+I +F+LP+NL
Sbjct:  222 PRKDARTLTADQIDRILPTPPPADPTPSTPADYIDQFRGWTWLAVLLLTYPLGHAIVTRGFGTSWTINAYNITFLVLALILHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGSLFSDFATQTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGQTLDVSVVTITLAYAYGDSMTNLIQPFFAIPILAVTRMKFGDVVGYTFLVAAACFAVTSIGMFLLPSNL 461          
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A1Z9UK60_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UK60_9GAMM)

HSP 1 Score: 370 bits (951), Expect = 8.280e-125
Identity = 180/239 (75.31%), Postives = 203/239 (84.94%), Query Frame = 1
Query:    1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTN 717
            PR  ART++    + ILP PP  D    TPA  IDQFRGW+ LA+VLLAYPLGH+I+  GFGTSWTINAYNITFLVLAL LHG+   FLRACR GVDSAWG+IVQFPFYAGIFGL+Q T LG+WLG LFA ++TT TYP++VYVYSGFMNLFVPSAGSKWMIEAPFLIPAGE LDVSVVT+ LAYAYGDS+TNLIQPFFAIPILAVTRMRFGD+VGYT LVA+  FVV++IA+FM+P  
Sbjct:  220 PRTGARTISPEDAEKILPKPPVLDEKASTPASHIDQFRGWILLAVVLLAYPLGHSIMTRGFGTSWTINAYNITFLVLALILHGRAPSFLRACRNGVDSAWGVIVQFPFYAGIFGLMQKTDLGEWLGNLFATISTTETYPWVVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEQLDVSVVTVMLAYAYGDSVTNLIQPFFAIPILAVTRMRFGDIVGYTFLVALVCFVVSSIAMFMIPAQ 458          
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A2E9GM11_9DELT (Short-chain fatty acid transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2E9GM11_9DELT)

HSP 1 Score: 349 bits (896), Expect = 1.820e-116
Identity = 164/240 (68.33%), Postives = 196/240 (81.67%), Query Frame = 1
Query:    1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720
            PR++  T T  Q++A+LP  P  DP P+TP   +D FRGW WLA +LLAYPLGH+I+  GFGTSWTI+AYN+TFL  AL LHG+PLPFLRACR GVD+AWGII+QFPFYAGIFGL+Q TGLG W+G  FAD A+  +YPF+VY YS  MNLFVPSAGSKW+IEAPFL+PA E LDVSVVT+ LAYAYGDS TNLIQPFFAIPILAVTR+RFG++VGYT L+A A F V+ +A+ ++P  L
Sbjct:  221 PRRDPVTFTPQQVEAMLPTLPAVDPPPKTPGGRLDAFRGWNWLAALLLAYPLGHSILSRGFGTSWTIDAYNVTFLTAALLLHGRPLPFLRACRDGVDAAWGIILQFPFYAGIFGLMQNTGLGAWIGGFFADFASQGSYPFVVYSYSAVMNLFVPSAGSKWLIEAPFLLPAAEQLDVSVVTVLLAYAYGDSTTNLIQPFFAIPILAVTRIRFGEIVGYTFLIACACFAVSALAMVLIPARL 460          
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A2D6BHF4_9DELT (Short-chain fatty acid transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A2D6BHF4_9DELT)

HSP 1 Score: 338 bits (868), Expect = 4.390e-112
Identity = 161/234 (68.80%), Postives = 191/234 (81.62%), Query Frame = 1
Query:   19 TLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720
            TL   Q+DAILP PP    +  +P   I+ FRGWVWLA +L+AYPLGH+I   GFGTSWTINAYN  FLV AL LHG+PL FL ACR G+D+AWGI+VQFPFYAGIFG++  TGLG W+G LFA LA+ ++YPF+VY YSG MNLFVPSAGSKW+IEAPFLIPAGE LDVSVVT+ LAYAYGDS TNLIQPF+AIPILAVTR+RFGDVVGY LL+A A F+ +++A+ ++P  L
Sbjct:  238 TLRPEQVDAILPRPPDPPRSDGSPRGRIEGFRGWVWLAALLIAYPLGHSIATQGFGTSWTINAYNAAFLVAALLLHGRPLAFLGACRRGMDAAWGIVVQFPFYAGIFGIMVHTGLGTWIGDLFARLASQSSYPFVVYAYSGLMNLFVPSAGSKWLIEAPFLIPAGEALDVSVVTVLLAYAYGDSTTNLIQPFWAIPILAVTRLRFGDVVGYLLLIAAACFLASSVAMALIPAQL 471          
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A7Y3GDU2_9DELT (Short-chain fatty acid transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3GDU2_9DELT)

HSP 1 Score: 337 bits (863), Expect = 1.840e-111
Identity = 162/240 (67.50%), Postives = 191/240 (79.58%), Query Frame = 1
Query:    1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720
            PRK+  TL   +I A++P PPPE  A  TPA  +D FRGWV LA++L+AYPLGH+IV  GFGTSWTINAYN+ FL  AL LHG+ L FL ACR GVD+AWGII+QFPFYAGIFGL+  T LG WLG LFA  ++T ++P +VYVYS FMNLFVP+AGSKW+IEAPFLIPAGE L VSV T+ LAY+YGDS TNLIQPFFAIPIL V R+RFGDVVGYT LVA+A F V  +A+ ++P NL
Sbjct:  222 PRKDVLTLAPERIAALVPKPPPEPVARDTPAGRMDAFRGWVILAVILMAYPLGHSIVTRGFGTSWTINAYNVVFLCTALLLHGRALSFLEACRRGVDAAWGIILQFPFYAGIFGLMTHTNLGAWLGELFARASSTGSFPLVVYVYSAFMNLFVPTAGSKWLIEAPFLIPAGEELGVSVTTLLLAYSYGDSTTNLIQPFFAIPILTVMRLRFGDVVGYTFLVALACFAVNVVAMLLIPANL 461          
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A524L4V9_9DELT (Short-chain fatty acid transporter n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A524L4V9_9DELT)

HSP 1 Score: 332 bits (851), Expect = 1.160e-109
Identity = 164/240 (68.33%), Postives = 188/240 (78.33%), Query Frame = 1
Query:    1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720
            PR+ A TLT  Q+ AILP+PP     P TP   ID FRGW WLA +LLA PLG AI   GFGTSWTINAYN  FL  AL LHG+PL FLRACRAG+DSAWGIIVQFPFYAGIFG++Q TGLG+WL TLF  LAT  +YP IVY Y+  +N FVPSAGSKW+IEAP+LI AGE L VSVV++ L Y YGDS TNLIQPFFAIP+LAVTR+RFGDVVGYT LVA+A F  T +A+ ++PT+L
Sbjct:  221 PRRGAVTLTPEQVAAILPSPPEALAEPVTPGGRIDAFRGWTWLAALLLAAPLGFAIATRGFGTSWTINAYNAVFLATALVLHGRPLAFLRACRAGLDSAWGIIVQFPFYAGIFGVMQNTGLGRWLETLFVGLATRESYPAIVYCYTAVVNFFVPSAGSKWLIEAPYLIGAGEQLGVSVVSVLLPYTYGDSTTNLIQPFFAIPMLAVTRLRFGDVVGYTFLVAVACFATTLVAMALIPTDL 460          
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A6B1AK64_9BACT (Short-chain fatty acid transporter n=9 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A6B1AK64_9BACT)

HSP 1 Score: 316 bits (810), Expect = 2.000e-103
Identity = 149/237 (62.87%), Postives = 185/237 (78.06%), Query Frame = 1
Query:    1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLP 711
            P ++A TLT A++D ILPAPPP   A  TPAE +D+FRGW  LA +L AYPL H+I+  GFG SWTINAYN  FLVLA+ LHG+P  FLRACR GV +AWGI++QFPFYAGIFGL+Q T LG WLG  FA +ATT  YP +VYVYSG M++F+PSAGSKWMIEAP++IPAGE LDVSV+T+ LAY YGDS  NLI PF+A+PILAVTR RFG+++GY  L+ +A  ++    + ++P
Sbjct:  224 PHRDAVTLTEAEVDEILPAPPPRAGAATTPAERLDRFRGWSLLAALLFAYPLIHSIITRGFGASWTINAYNTVFLVLAIVLHGRPTSFLRACRDGVGAAWGIVLQFPFYAGIFGLIQNTNLGGWLGEQFAAVATTRLYPLVVYVYSGIMSMFIPSAGSKWMIEAPYVIPAGEALDVSVMTVLLAYTYGDSAFNLIHPFWALPILAVTRRRFGEILGYAFLLWLATILLGVATMLVIP 460          
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A2E6ZVM1_9BACT (Short-chain fatty acid transporter n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2E6ZVM1_9BACT)

HSP 1 Score: 303 bits (776), Expect = 2.620e-98
Identity = 149/240 (62.08%), Postives = 182/240 (75.83%), Query Frame = 1
Query:    1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720
            PR+NARTLT  +ID ++P  P E+  P TPA  ++ FRGW  LA+VL+ YPLGH+IV  GFG SWTINAYN  FL+ AL L G P   +RA   G  +A G+I+QFPFYAGIFG++  TGLG WLG +F  +ATT TYP IVYVYSG +N+FVPS GSKW+IEAP+L+PA   L VS  T  LAYAYGDS +NLIQPF+AIPIL VTRM+FGDV+GYT LVA+A+F VT IA+F++P  L
Sbjct:  224 PRQNARTLTPEEIDRMMPVMPTEE-EPTTPAASMEAFRGWTLLAVVLIGYPLGHSIVTQGFGASWTINAYNAVFLIGALLLQGSPANLVRAFANGARTASGVILQFPFYAGIFGVINGTGLGDWLGDIFVTIATTETYPLIVYVYSGIVNVFVPSGGSKWLIEAPYLLPAARELAVSPTTTVLAYAYGDSTSNLIQPFWAIPILTVTRMKFGDVLGYTGLVALALFAVTVIAMFLIPPML 462          
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A520W457_9BACT (Short-chain fatty acid transporter n=2 Tax=Bacteria TaxID=2 RepID=A0A520W457_9BACT)

HSP 1 Score: 298 bits (764), Expect = 1.900e-96
Identity = 143/240 (59.58%), Postives = 184/240 (76.67%), Query Frame = 1
Query:    1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720
            PRKNA+TLT+ +I+ +LP  P E PA  TPA  ++ FRGW++LA +L+ YPLG+++V  GFG +WTINAYN  FLV AL L G+P   ++A   G  +A G+I+QFPFYAGIFG++  TGLG WLG LF   ATT TYP +VY YSGFMN+FVPSAGSKW+IEAP+L+PA + L VS  T  LAYAYGDS TNLIQPF+AIPIL VTR++FGDV+GYT +VA+   +++ IA+ ++P NL
Sbjct:  228 PRKNAQTLTSDEIERMLPKLPEEKPA-TTPAARMESFRGWIFLAAILIGYPLGYSMVTRGFGATWTINAYNAVFLVSALLLQGRPSNLVQAFSNGARTASGVILQFPFYAGIFGVINNTGLGSWLGDLFVTFATTETYPLVVYFYSGFMNIFVPSAGSKWLIEAPYLLPAAKELGVSATTTVLAYAYGDSTTNLIQPFWAIPILTVTRLKFGDVLGYTGIVAIVCMIISVIAMLLIPPNL 466          
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Match: A0A6B1DFQ9_9BACT (Short-chain fatty acid transporter n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A6B1DFQ9_9BACT)

HSP 1 Score: 295 bits (755), Expect = 3.730e-95
Identity = 141/240 (58.75%), Postives = 183/240 (76.25%), Query Frame = 1
Query:    1 PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAYPLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAWGIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMNLFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFAIPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL 720
            PR+N +TL++ QID ++PA P E P P++PA  ++ FRGW+ LA +L+ YPLG+++V  GFG +WTINAYN  FLV AL L G+P   +RA   G  +A G+I+QFPFYAGIFG++  TGLG WLG LF   ATT TYP +VY YSGF+NLFVPS GSKW+IEAP+L+PA   L VS  T  LAYAYGDS+TN IQPF+AIPIL VTR++FGDV+GYT +VA+   +++ IA+F++P NL
Sbjct:  223 PRRNIQTLSSEQIDQMMPALPDEQP-PQSPAHRMEAFRGWIVLAAILIGYPLGYSMVTRGFGATWTINAYNAVFLVTALLLQGRPSNIVRAFGNGARTASGVILQFPFYAGIFGVINNTGLGAWLGELFVTFATTETYPAVVYFYSGFVNLFVPSGGSKWLIEAPYLLPAARELGVSPTTTVLAYAYGDSITNFIQPFWAIPILTVTRLKFGDVLGYTGIVAIVCTIISVIAMFLIPPNL 461          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90067.20879.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DC19_9GAMM5.510e-14886.25Uncharacterized protein n=1 Tax=Gammaproteobacteri... [more]
A0A1Z9UK60_9GAMM8.280e-12575.31Uncharacterized protein n=2 Tax=Gammaproteobacteri... [more]
A0A2E9GM11_9DELT1.820e-11668.33Short-chain fatty acid transporter n=1 Tax=Deltapr... [more]
A0A2D6BHF4_9DELT4.390e-11268.80Short-chain fatty acid transporter n=1 Tax=Deltapr... [more]
A0A7Y3GDU2_9DELT1.840e-11167.50Short-chain fatty acid transporter n=1 Tax=Myxococ... [more]
A0A524L4V9_9DELT1.160e-10968.33Short-chain fatty acid transporter n=1 Tax=Myxococ... [more]
A0A6B1AK64_9BACT2.000e-10362.87Short-chain fatty acid transporter n=9 Tax=Gemmati... [more]
A0A2E6ZVM1_9BACT2.620e-9862.08Short-chain fatty acid transporter n=1 Tax=Acidoba... [more]
A0A520W457_9BACT1.900e-9659.58Short-chain fatty acid transporter n=2 Tax=Bacteri... [more]
A0A6B1DFQ9_9BACT3.730e-9558.75Short-chain fatty acid transporter n=1 Tax=Acidoba... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90067contigM-pyrifera_M_contig90067:74..796 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score179.1
Seed ortholog evalue2.5e-42
Seed eggNOG ortholog1278073.MYSTI_00683
Preferred nameatoE
KEGG koko:K02106
KEGG TC2.A.73.1
KEGG Pathwayko02020,map02020
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0016020,GO:0044464,GO:0071944
EggNOG free text desc.Short chain fatty acid transporter
EggNOG OGs1MV5A@1224,2WITD@28221,2YUZH@29,42PE0@68525,COG2031@1,COG2031@2
COG Functional cat.I
BiGG ReactioniECUMN_1333.ECUMN_2561
Best tax levelMyxococcales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001
Exons1
Model size723
Cds size723
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816812.1836972-CDS-M-pyrifera_M_contig90067:73..7961622816812.1836972-CDS-M-pyrifera_M_contig90067:73..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90067 74..796 -
1692278193.0203733-CDS-M-pyrifera_M_contig90067:73..7961692278193.0203733-CDS-M-pyrifera_M_contig90067:73..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90067 74..796 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90067.20879.1prot_M-pyrifera_M_contig90067.20879.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90067 74..796 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90067.20879.1

>prot_M-pyrifera_M_contig90067.20879.1 ID=prot_M-pyrifera_M_contig90067.20879.1|Name=mRNA_M-pyrifera_M_contig90067.20879.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=241bp
PRKNARTLTAAQIDAILPAPPPEDPAPRTPAEFIDQFRGWVWLAIVLLAY
PLGHAIVENGFGTSWTINAYNITFLVLALALHGKPLPFLRACRAGVDSAW
GIIVQFPFYAGIFGLLQFTGLGKWLGTLFADLATTTTYPFIVYVYSGFMN
LFVPSAGSKWMIEAPFLIPAGEILDVSVVTITLAYAYGDSLTNLIQPFFA
IPILAVTRMRFGDVVGYTLLVAMAVFVVTTIAIFMLPTNL*
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mRNA from alignment at M-pyrifera_M_contig90067:74..796-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90067.20879.1 ID=mRNA_M-pyrifera_M_contig90067.20879.1|Name=mRNA_M-pyrifera_M_contig90067.20879.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=723bp|location=Sequence derived from alignment at M-pyrifera_M_contig90067:74..796- (Macrocystis pyrifera P11B4 male)
CCGCGCAAGAACGCGCGCACCCTGACCGCGGCGCAAATCGACGCGATCCT GCCGGCGCCACCACCGGAAGATCCGGCGCCGCGAACGCCAGCGGAATTTA TCGACCAGTTTCGCGGCTGGGTATGGCTCGCCATCGTCCTGCTCGCCTAT CCGCTTGGTCATGCGATTGTCGAAAATGGTTTTGGCACAAGCTGGACGAT CAACGCCTACAACATCACGTTTCTCGTCCTCGCACTCGCGCTGCATGGCA AACCCCTGCCATTCCTGCGCGCGTGCCGGGCCGGGGTCGATTCAGCGTGG GGAATCATCGTGCAGTTCCCGTTCTATGCCGGGATATTCGGGCTGCTCCA GTTTACCGGGCTCGGCAAATGGCTTGGTACGCTGTTCGCGGATCTGGCGA CGACGACGACGTATCCGTTCATCGTCTACGTTTATTCGGGTTTCATGAAT CTGTTCGTGCCGTCAGCCGGCTCGAAATGGATGATCGAAGCACCGTTTCT GATCCCGGCCGGCGAAATTCTCGACGTGTCCGTCGTCACGATAACGCTTG CATACGCCTACGGTGACTCGCTGACGAATCTGATTCAGCCATTTTTCGCG ATCCCGATCCTCGCGGTAACCCGCATGCGGTTCGGTGATGTCGTCGGCTA TACCTTGCTCGTGGCAATGGCGGTTTTCGTCGTAACCACGATCGCGATTT TCATGTTGCCAACAAACTTGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig90067:74..796-

>mRNA_M-pyrifera_M_contig90067.20879.1 ID=mRNA_M-pyrifera_M_contig90067.20879.1|Name=mRNA_M-pyrifera_M_contig90067.20879.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1446bp|location=Sequence derived from alignment at M-pyrifera_M_contig90067:74..796- (Macrocystis pyrifera P11B4 male)
CCGCGCAAGAACGCGCGCACCCTGACCGCGGCGCAAATCGACGCGATCCT
GCCGGCGCCACCACCGGAAGATCCGGCGCCGCGAACGCCAGCGGAATTTA
TCGACCAGTTTCGCGGCTGGGTATGGCTCGCCATCGTCCTGCTCGCCTAT
CCGCTTGGTCATGCGATTGTCGAAAATGGTTTTGGCACAAGCTGGACGAT
CAACGCCTACAACATCACGTTTCTCGTCCTCGCACTCGCGCTGCATGGCA
AACCCCTGCCATTCCTGCGCGCGTGCCGGGCCGGGGTCGATTCAGCGTGG
GGAATCATCGTGCAGTTCCCGTTCTATGCCGGGATATTCGGGCTGCTCCA
GTTTACCGGGCTCGGCAAATGGCTTGGTACGCTGTTCGCGGATCTGGCGA
CGACGACGACGTATCCGTTCATCGTCTACGTTTATTCGGGTTTCATGAAT
CTGTTCGTGCCGTCAGCCGGCTCGAAATGGATGATCGAAGCACCGTTTCT
GATCCCGGCCGGCGAAATTCTCGACGTGTCCGTCGTCACGATAACGCTTG
CATACGCCTACGGTGACTCGCTGACGAATCTGATTCAGCCATTTTTCGCG
ATCCCGATCCTCGCGGTAACCCGCATGCGGTTCGGTGATGTCGTCGGCTA
TACCTTGCTCGTGGCAATGGCGGTTTTCGTCGTAACCACGATCGCGATTT
TCATGTTGCCAACAAACTTGTAGCCGCGCAAGAACGCGCGCACCCTGACC
GCGGCGCAAATCGACGCGATCCTGCCGGCGCCACCACCGGAAGATCCGGC
GCCGCGAACGCCAGCGGAATTTATCGACCAGTTTCGCGGCTGGGTATGGC
TCGCCATCGTCCTGCTCGCCTATCCGCTTGGTCATGCGATTGTCGAAAAT
GGTTTTGGCACAAGCTGGACGATCAACGCCTACAACATCACGTTTCTCGT
CCTCGCACTCGCGCTGCATGGCAAACCCCTGCCATTCCTGCGCGCGTGCC
GGGCCGGGGTCGATTCAGCGTGGGGAATCATCGTGCAGTTCCCGTTCTAT
GCCGGGATATTCGGGCTGCTCCAGTTTACCGGGCTCGGCAAATGGCTTGG
TACGCTGTTCGCGGATCTGGCGACGACGACGACGTATCCGTTCATCGTCT
ACGTTTATTCGGGTTTCATGAATCTGTTCGTGCCGTCAGCCGGCTCGAAA
TGGATGATCGAAGCACCGTTTCTGATCCCGGCCGGCGAAATTCTCGACGT
GTCCGTCGTCACGATAACGCTTGCATACGCCTACGGTGACTCGCTGACGA
ATCTGATTCAGCCATTTTTCGCGATCCCGATCCTCGCGGTAACCCGCATG
CGGTTCGGTGATGTCGTCGGCTATACCTTGCTCGTGGCAATGGCGGTTTT
CGTCGTAACCACGATCGCGATTTTCATGTTGCCAACAAACTTGTAG
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