mRNA_M-pyrifera_M_contig90043.20866.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig90043.20866.1
Unique NamemRNA_M-pyrifera_M_contig90043.20866.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: A0A517PT28_9PLAN (Non-specific serine/threonine protein kinase n=3 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PT28_9PLAN)

HSP 1 Score: 508 bits (1309), Expect = 3.390e-175
Identity = 259/260 (99.62%), Postives = 259/260 (99.62%), Query Frame = 1
Query:    1 MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKRYDVEST 780
            MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKR DVEST
Sbjct:    1 MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKRSDVEST 260          
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: A6BZ68_9PLAN (Non-specific serine/threonine protein kinase n=4 Tax=Planctomycetaceae TaxID=126 RepID=A6BZ68_9PLAN)

HSP 1 Score: 429 bits (1102), Expect = 1.560e-145
Identity = 208/260 (80.00%), Postives = 241/260 (92.69%), Query Frame = 1
Query:    1 MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKRYDVEST 780
            MNN PYDP+DDDL+A A T+DRICDSFESSWKQG+ PEIES+L ET+GKTQSI+FAEL+RLDIHYR +NGNL+SLD+YQSRFPQYS+ILQDF+SQLADS +Q+RR+GRYRLEKIVG+GAFG+VWKAWDEELQR VA+K+PR +SLS  ER RF REARSAARLSHPGIVSI+DFEEIDG+ +LVTE+++GSTLR+WTRHHEVDF  AA+ICRDLA ALHAAHQ+SVIHRDLKPNNVL+T+D Q+RITDFGLAKR DVEST
Sbjct:    1 MNNFPYDPSDDDLIAVAITVDRICDSFESSWKQGRPPEIESYLNETAGKTQSIIFAELIRLDIHYRSLNGNLISLDEYQSRFPQYSEILQDFSSQLADSHQQIRRIGRYRLEKIVGQGAFGVVWKAWDEELQRIVAVKIPRNQSLSEQERNRFFREARSAARLSHPGIVSIYDFEEIDGSPILVTEYIQGSTLRDWTRHHEVDFIAAATICRDLASALHAAHQESVIHRDLKPNNVLITEDGQVRITDFGLAKRCDVEST 260          
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: A0A2E2C6X7_9PLAN (Non-specific serine/threonine protein kinase n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C6X7_9PLAN)

HSP 1 Score: 423 bits (1088), Expect = 7.880e-142
Identity = 210/261 (80.46%), Postives = 239/261 (91.57%), Query Frame = 1
Query:    1 MNNPPYDPADDD-LMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKRYDVEST 780
            M NPPY+P DDD LMA A TIDRICDSFESSWKQG++P IESFL ET+GKTQSIVF EL+RLDIHYR +NG L+SLD+YQSRFPQYS+ILQDF+SQLADS +Q+RR+GRYRLEKIVGRGAFG+VWKAWDEELQR VA+K+PR +SLS  ER RF REARSAARLSHPGIVSI+DFEEIDG+ VLVTE+++GSTLR+WTRHHEVDF +AA+ICRDLA ALHAAHQ+SVIHRDLKPNNVL+T+D Q+RITDFGLAKR DVEST
Sbjct:    1 MTNPPYNPVDDDDLMAVAITIDRICDSFESSWKQGRAPLIESFLNETAGKTQSIVFPELIRLDIHYRSLNGTLISLDEYQSRFPQYSEILQDFSSQLADSHQQIRRIGRYRLEKIVGRGAFGVVWKAWDEELQRIVAVKIPRNQSLSEQERNRFFREARSAARLSHPGIVSIYDFEEIDGSPVLVTEYIQGSTLRDWTRHHEVDFIEAATICRDLASALHAAHQESVIHRDLKPNNVLITEDGQVRITDFGLAKRSDVEST 261          
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: A0A6I6AGT6_9PLAN (Non-specific serine/threonine protein kinase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A6I6AGT6_9PLAN)

HSP 1 Score: 372 bits (955), Expect = 1.250e-122
Identity = 190/193 (98.45%), Postives = 192/193 (99.48%), Query Frame = 1
Query:  202 MNGNLLSLDDYQSRFPQYSDILQDFTSQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKRYDVEST 780
            MNGNLLSLDDYQSRFPQYS+ILQDF+SQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKR DVEST
Sbjct:    1 MNGNLLSLDDYQSRFPQYSEILQDFSSQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKRSDVEST 193          
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: A0A2E7KBA2_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Gimesia sp. TaxID=2024833 RepID=A0A2E7KBA2_9PLAN)

HSP 1 Score: 268 bits (685), Expect = 7.990e-89
Identity = 132/134 (98.51%), Postives = 133/134 (99.25%), Query Frame = 1
Query:    1 MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRT 402
            MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDF+SQL DSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRT
Sbjct:    1 MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFSSQLTDSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRT 134          
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: A0A518IF67_9PLAN (Non-specific serine/threonine protein kinase n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518IF67_9PLAN)

HSP 1 Score: 196 bits (497), Expect = 4.210e-54
Identity = 112/264 (42.42%), Postives = 153/264 (57.95%), Query Frame = 1
Query:    1 MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLADSFRQVR----RLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKRYDVEST 780
            MN+P  D   D+    A  ID ICD FES WK    P+I  +L      ++S +  EL+RLD  YR   G   S ++Y S FP YSD+L    ++ +   ++V     ++G   L +I G GAFG VWKAWD EL+R VA+KLP  K     +   F  EA++AA+L HP IV ++   +IDG   +V ++++G TLR       +   +AA IC  LA  L  AHQQ VIHRDLKP+N+L+ +  Q  ITDFGLAKR DV ++
Sbjct:    1 MNSPDLDWVPDEDSFTANQIDLICDEFESIWKSEDRPQISDYLYRVEEPSRSALLVELVRLDYAYRLEKGETPSSEEYVSLFPDYSDVLLTRVNEFSSIGKEVSEAPSKIGDIELLEIAGFGAFGTVWKAWDLELKRQVAVKLPSNKLDGKQQVDLFLHEAQAAAKLHHPNIVPVYSSGQIDGRGYIVFKYIQGETLRALLNKQALAHEQAAQICLALAAGLDHAHQQGVIHRDLKPSNILIDETGQPHITDFGLAKRIDVTAS 264          
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: A0A517WTY5_9PLAN (Non-specific serine/threonine protein kinase n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WTY5_9PLAN)

HSP 1 Score: 194 bits (492), Expect = 2.330e-53
Identity = 112/264 (42.42%), Postives = 154/264 (58.33%), Query Frame = 1
Query:    1 MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDIL----QDFTSQLADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKRYDVEST 780
            MN+P      D+    A  ID ICD FES+WK    P+I  +L     +++S +  EL+RLD  YR   G   S ++Y S FP YSD+L     DF+S   D      ++G   L + VG GAFG VWKAWD EL+R VA+KLP  +     + + F  EA++AA+L HP IV ++   +I+G   +V +F++G TLR         F +AA IC  LA  L  AHQQ V+HRDLKP+N+L+ +  Q  ITDFGLAKR D+ ++
Sbjct:    1 MNSPDSGWPPDEDSFTANQIDLICDEFESAWKSEGHPKIADYLSRMEEQSRSALLVELVRLDCAYRLNQGETPSAEEYVSLFPDYSDVLLTHVNDFSSIGKDFAEVPSKIGDIELLERVGFGAFGTVWKAWDLELKRQVAVKLPSNRLEGKQQIELFLHEAQAAAKLHHPNIVPVYSSGQIEGRGYIVFKFIKGETLRVLLNKQTPTFEQAAQICLALAEGLEHAHQQGVVHRDLKPSNILIDEAGQPHITDFGLAKRIDITAS 264          
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: M5T4Z8_9BACT (Non-specific serine/threonine protein kinase n=2 Tax=Rhodopirellula TaxID=265488 RepID=M5T4Z8_9BACT)

HSP 1 Score: 171 bits (434), Expect = 2.350e-46
Identity = 95/262 (36.26%), Postives = 157/262 (59.92%), Query Frame = 1
Query:   58 IDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLA------DSF--------------------RQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTL-VLVTEFVEGSTLREWTRHHEVDFS-KAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAK 759
            +D IC+ FES+ + G+ P IE++L++        +  ELL++D+ +++ +  L   + Y++RFP++ D +     +LA      DS                       +R++GR+   + +G G FG+VW+A+D +L+RTVALK+P  K      R+RF+RE+++AARLSH GIVS++D   ++G L V+V++F++G +L +  +   V    +AA++C DLA AL  AH + ++HRDLKP N+L   D +  +TDFGLAK
Sbjct:   10 LDEICNRFESAHRSGEQPAIEAYLQQAISSDPQKLLTELLQIDLWWKQKSAFLPDPEHYRTRFPEHPDAIDAAYRELAVKTLPPDSGMTRCDQNYSDHESTDRSPIPESLRKIGRFEFNEQIGSGGFGVVWRAYDTQLRRTVALKIPHAKHFKGSVRERFTRESQAAARLSHDGIVSVYDICLVEGNLPVIVSQFIDGPSLADVKKRQRVFAGIEAAAVCADLADALSHAHGKGIVHRDLKPGNILTDSDGKAYVTDFGLAK 271          
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: A3ZXL6_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Blastopirellula marina DSM 3645 TaxID=314230 RepID=A3ZXL6_9BACT)

HSP 1 Score: 174 bits (441), Expect = 3.100e-46
Identity = 97/252 (38.49%), Postives = 141/252 (55.95%), Query Frame = 1
Query:   34 DLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQ---LADSFRQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAKRYDVEST 780
            D +A    +D ICD FES W+Q + P I  +        +  +  EL+R+D+ YR   G   S++DY++       ++   +++   L +      RLGR+ L K VG G+FG VWKA D  L R VA+KL R     + E+  F+REARS ARL HP +V++H++ EIDG   +V+EF++G TLR       +    AA    DLA AL   H + ++HRDLKP+N+L     +  I DFGLAK  D ++T
Sbjct:    4 DKIAIECELDAICDDFESHWQQAERPVISQYATRVDPSLRDTLLVELIRVDVAYRLQTGEDCSIEDYRTLIAHSVPLIDTLSAEFSGLREEASLPERLGRFELLKRVGEGSFGTVWKAIDTRLDRVVAVKLLRNHLAGSAEQAMFAREARSLARLKHPNVVAVHEYGEIDGRPYIVSEFMDGETLRTRISAGPLAPKSAAKFTVDLADALQHFHSKGIVHRDLKPSNILFDQFGEPSIADFGLAKYLDGQTT 255          
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Match: A0A517TBZ3_9PLAN (Non-specific serine/threonine protein kinase n=1 Tax=Calycomorphotria hydatis TaxID=2528027 RepID=A0A517TBZ3_9PLAN)

HSP 1 Score: 170 bits (431), Expect = 8.450e-45
Identity = 98/249 (39.36%), Postives = 141/249 (56.63%), Query Frame = 1
Query:   58 IDRICDSFESSWKQGQSPEIESFLKETSGKTQSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLADSFRQ---------------VRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVERKRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHHEVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFGLAK 759
            +DR+C  F +SW++G+ P IE F+ ET G  Q+ +   L+ LD+  R   G    L +Y SRFP   +++   +    DS                  V RLGRY +   +G G+FG VW+AWD +L+R VALK+  +  LS  E      EA +AA+LSHP IVS++D  E DG   +V E+VEG+ L+      +++  +A  +   LA AL  AH+Q VIHRD+KP+NVLV      R+TDFG+A+
Sbjct:   22 VDRVCHRFLNSWQKGEKPRIEDFVVETRGFDQTTLLNRLILLDVKERIKLGEHPELSEYASRFPSSVEVINRLSPLFQDSGSDILAINDATAILDVCAVGRLGRYDISSRLGTGSFGAVWRAWDRKLKRNVALKVIDRARLSKHEVDLALHEAGAAAQLSHPNIVSVYDVGEADGAFFIVAEYVEGADLKTHLAQGKLNPERAVKMVCQLAQALQHAHEQGVIHRDVKPSNVLVDYQGNARLTDFGIAR 270          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90043.20866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PT28_9PLAN3.390e-17599.62Non-specific serine/threonine protein kinase n=3 T... [more]
A6BZ68_9PLAN1.560e-14580.00Non-specific serine/threonine protein kinase n=4 T... [more]
A0A2E2C6X7_9PLAN7.880e-14280.46Non-specific serine/threonine protein kinase n=4 T... [more]
A0A6I6AGT6_9PLAN1.250e-12298.45Non-specific serine/threonine protein kinase n=2 T... [more]
A0A2E7KBA2_9PLAN7.990e-8998.51Uncharacterized protein (Fragment) n=1 Tax=Gimesia... [more]
A0A518IF67_9PLAN4.210e-5442.42Non-specific serine/threonine protein kinase n=1 T... [more]
A0A517WTY5_9PLAN2.330e-5342.42Non-specific serine/threonine protein kinase n=1 T... [more]
M5T4Z8_9BACT2.350e-4636.26Non-specific serine/threonine protein kinase n=2 T... [more]
A3ZXL6_9BACT3.100e-4638.49Non-specific serine/threonine protein kinase n=1 T... [more]
A0A517TBZ3_9PLAN8.450e-4539.36Non-specific serine/threonine protein kinase n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90043contigM-pyrifera_M_contig90043:17..796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score433.3
Seed ortholog evalue7.8e-119
Seed eggNOG ortholog344747.PM8797T_28584
Hectar predicted targeting categoryother localisation
EggNOG free text desc.PFAM Protein kinase domain
EggNOG OGs2IY73@203682,COG0515@1,COG0515@2
COG Functional cat.KLT
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size780
Cds size780
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816811.6512272-CDS-M-pyrifera_M_contig90043:16..7961622816811.6512272-CDS-M-pyrifera_M_contig90043:16..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90043 17..796 +
1692278192.7276926-CDS-M-pyrifera_M_contig90043:16..7961692278192.7276926-CDS-M-pyrifera_M_contig90043:16..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig90043 17..796 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90043.20866.1prot_M-pyrifera_M_contig90043.20866.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig90043 17..796 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig90043.20866.1

>prot_M-pyrifera_M_contig90043.20866.1 ID=prot_M-pyrifera_M_contig90043.20866.1|Name=mRNA_M-pyrifera_M_contig90043.20866.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=260bp
MNNPPYDPADDDLMAAAYTIDRICDSFESSWKQGQSPEIESFLKETSGKT
QSIVFAELLRLDIHYRRMNGNLLSLDDYQSRFPQYSDILQDFTSQLADSF
RQVRRLGRYRLEKIVGRGAFGLVWKAWDEELQRTVALKLPRKKSLSAVER
KRFSREARSAARLSHPGIVSIHDFEEIDGTLVLVTEFVEGSTLREWTRHH
EVDFSKAASICRDLAIALHAAHQQSVIHRDLKPNNVLVTDDDQLRITDFG
LAKRYDVEST
back to top

mRNA from alignment at M-pyrifera_M_contig90043:17..796+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig90043.20866.1 ID=mRNA_M-pyrifera_M_contig90043.20866.1|Name=mRNA_M-pyrifera_M_contig90043.20866.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=780bp|location=Sequence derived from alignment at M-pyrifera_M_contig90043:17..796+ (Macrocystis pyrifera P11B4 male)
ATGAATAATCCCCCCTATGATCCTGCAGATGATGATCTCATGGCGGCAGC CTATACCATTGATCGCATCTGTGACAGCTTCGAATCATCCTGGAAACAGG GACAATCTCCCGAAATCGAGAGTTTCCTCAAAGAGACTTCCGGTAAGACC CAGTCTATTGTCTTCGCCGAATTACTCCGACTCGATATCCACTATCGCAG GATGAACGGGAACCTGCTCTCCCTGGATGACTATCAGTCCCGCTTTCCAC AGTACAGTGATATCCTGCAGGACTTCACCTCCCAGCTCGCAGATTCATTT CGGCAGGTACGTCGGCTCGGCCGCTATCGGCTTGAAAAAATCGTCGGCCG AGGTGCCTTCGGTCTGGTCTGGAAAGCATGGGACGAAGAACTCCAGCGGA CCGTCGCCCTCAAGCTTCCTCGAAAAAAGTCACTCTCGGCTGTCGAACGG AAACGCTTCTCCCGGGAAGCCCGCTCTGCCGCCCGACTTTCCCACCCCGG AATTGTATCCATCCACGACTTCGAGGAAATTGACGGCACTCTCGTACTGG TCACGGAATTTGTCGAAGGCTCCACCCTCCGCGAATGGACCAGACACCAC GAGGTCGACTTCAGCAAAGCCGCGAGCATCTGTCGTGACCTGGCCATCGC CCTCCATGCCGCGCACCAGCAGTCAGTAATCCACCGGGATCTCAAGCCGA ATAACGTCTTGGTTACAGATGACGACCAGCTGCGCATCACCGATTTTGGT CTCGCCAAACGCTATGATGTCGAGTCCACA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig90043:17..796+

>mRNA_M-pyrifera_M_contig90043.20866.1 ID=mRNA_M-pyrifera_M_contig90043.20866.1|Name=mRNA_M-pyrifera_M_contig90043.20866.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1560bp|location=Sequence derived from alignment at M-pyrifera_M_contig90043:17..796+ (Macrocystis pyrifera P11B4 male)
ATGAATAATCCCCCCTATGATCCTGCAGATGATGATCTCATGGCGGCAGC
CTATACCATTGATCGCATCTGTGACAGCTTCGAATCATCCTGGAAACAGG
GACAATCTCCCGAAATCGAGAGTTTCCTCAAAGAGACTTCCGGTAAGACC
CAGTCTATTGTCTTCGCCGAATTACTCCGACTCGATATCCACTATCGCAG
GATGAACGGGAACCTGCTCTCCCTGGATGACTATCAGTCCCGCTTTCCAC
AGTACAGTGATATCCTGCAGGACTTCACCTCCCAGCTCGCAGATTCATTT
CGGCAGGTACGTCGGCTCGGCCGCTATCGGCTTGAAAAAATCGTCGGCCG
AGGTGCCTTCGGTCTGGTCTGGAAAGCATGGGACGAAGAACTCCAGCGGA
CCGTCGCCCTCAAGCTTCCTCGAAAAAAGTCACTCTCGGCTGTCGAACGG
AAACGCTTCTCCCGGGAAGCCCGCTCTGCCGCCCGACTTTCCCACCCCGG
AATTGTATCCATCCACGACTTCGAGGAAATTGACGGCACTCTCGTACTGG
TCACGGAATTTGTCGAAGGCTCCACCCTCCGCGAATGGACCAGACACCAC
GAGGTCGACTTCAGCAAAGCCGCGAGCATCTGTCGTGACCTGGCCATCGC
CCTCCATGCCGCGCACCAGCAGTCAGTAATCCACCGGGATCTCAAGCCGA
ATAACGTCTTGGTTACAGATGACGACCAGCTGCGCATCACCGATTTTGGT
CTCGCCAAACGCTATGATGTCGAGTCCACAATGAATAATCCCCCCTATGA
TCCTGCAGATGATGATCTCATGGCGGCAGCCTATACCATTGATCGCATCT
GTGACAGCTTCGAATCATCCTGGAAACAGGGACAATCTCCCGAAATCGAG
AGTTTCCTCAAAGAGACTTCCGGTAAGACCCAGTCTATTGTCTTCGCCGA
ATTACTCCGACTCGATATCCACTATCGCAGGATGAACGGGAACCTGCTCT
CCCTGGATGACTATCAGTCCCGCTTTCCACAGTACAGTGATATCCTGCAG
GACTTCACCTCCCAGCTCGCAGATTCATTTCGGCAGGTACGTCGGCTCGG
CCGCTATCGGCTTGAAAAAATCGTCGGCCGAGGTGCCTTCGGTCTGGTCT
GGAAAGCATGGGACGAAGAACTCCAGCGGACCGTCGCCCTCAAGCTTCCT
CGAAAAAAGTCACTCTCGGCTGTCGAACGGAAACGCTTCTCCCGGGAAGC
CCGCTCTGCCGCCCGACTTTCCCACCCCGGAATTGTATCCATCCACGACT
TCGAGGAAATTGACGGCACTCTCGTACTGGTCACGGAATTTGTCGAAGGC
TCCACCCTCCGCGAATGGACCAGACACCACGAGGTCGACTTCAGCAAAGC
CGCGAGCATCTGTCGTGACCTGGCCATCGCCCTCCATGCCGCGCACCAGC
AGTCAGTAATCCACCGGGATCTCAAGCCGAATAACGTCTTGGTTACAGAT
GACGACCAGCTGCGCATCACCGATTTTGGTCTCGCCAAACGCTATGATGT
CGAGTCCACA
back to top