prot_M-pyrifera_M_contig90024.20861.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig90024.20861.1
Unique Nameprot_M-pyrifera_M_contig90024.20861.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length210
Homology
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: A0A7Y2ILX0_9ACTN (Cytochrome-c oxidase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2ILX0_9ACTN)

HSP 1 Score: 298 bits (764), Expect = 5.240e-97
Identity = 145/224 (64.73%), Postives = 170/224 (75.89%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKLEEKNEPT----------ELDVMVIGQQWWWEYRYDVDGDGFFRDADGDG----EIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITPADVPTDES-ALAGRTLFQANCASCHVI 209
            WT  PA++L  +SV TV SIW LEEKN P           +LDV+VIGQQWWWEYRYD+D DGFF D DGDG    ++W       D DD EWPLE+ALD DD+SVANE+VIPAG Q+DLTITSRDVIHS+WIPRLNGKRDAVPGR HTW++EAD  G+YTGWCTE+CGLSHARMRM+ +AL  +++D W ANQ TPAD+P + S A AGR  FQ  CASCH+I
Sbjct:  101 WTAAPAVLLIFISVFTVFSIWDLEEKNTPGGGVAACGDTGDLDVLVIGQQWWWEYRYDIDCDGFFEDLDGDGVNNTDVW-------DADDAEWPLEIALDDDDVSVANEMVIPAGQQIDLTITSRDVIHSFWIPRLNGKRDAVPGRLHTWNLEADFPGEYTGWCTEFCGLSHARMRMNVIALTDSEFDEWLANQSTPADIPPEGSEAAAGRETFQQQCASCHII 317          
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: A0A7Y2DLJ3_9ACTN (Cytochrome-c oxidase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2DLJ3_9ACTN)

HSP 1 Score: 290 bits (741), Expect = 1.680e-93
Identity = 143/222 (64.41%), Postives = 166/222 (74.77%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKLEEKNEPT-------ELDVMVIGQQWWWEYRYDVDGDGFFRDAD-----GDGEIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITPADVPTDES-ALAGRTLFQANCASCHVI 209
            WT  PA++LA +SV TV++IW LEE N+P        ELDVMVIGQQWWWEYRYD+DGDGFF D          + W       D DD EWPLE+ALD DD+SVANELVIPAG Q+DLTITSRDVIHS+WIPRLNGKRDAVPGR H+W+  A+E G+YTGWCTEYCGLSHARMRM+T+AL   ++D W ANQ T AD+P   S A AGR LFQ  CASCH++
Sbjct:  106 WTAAPAVLLAGISVFTVLAIWDLEEANDPGGYLDGEGELDVMVIGQQWWWEYRYDIDGDGFFEDXXXXXXPNSTDEW-------DPDDAEWPLEIALDDDDISVANELVIPAGQQIDLTITSRDVIHSFWIPRLNGKRDAVPGRLHSWNFTAEEPGEYTGWCTEYCGLSHARMRMNTIALPPDEFDEWIANQATTADIPAAGSEAAAGRELFQQQCASCHIV 320          
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: A0A5Q2RQL6_9ACTN (Cytochrome c oxidase subunit 2 n=2 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RQL6_9ACTN)

HSP 1 Score: 198 bits (503), Expect = 9.660e-59
Identity = 101/210 (48.10%), Postives = 130/210 (61.90%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKLEEKNEPTELDVMVIGQQWWWEYRYDVDGDGFFRDADGDGEIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITPADVPTDESALAGRTLFQANCASCHVIR 210
            WTILPA++LA V+V T+++I++LE++++   +D+ V+G QWWW++ YDVD DG F                                 D S A E+VIPAG QV+L+I S DVIHS+WIPRLNGKRDAVPGR HT S+E+DE G + G CTE+CGLSH  MRM  +AL Q ++D W   Q      P   S   GR  F+ANCASCH IR
Sbjct:  103 WTILPAVILAFVAVFTLVTIFELEKRDDDA-VDINVVGNQWWWQFNYDVDDDGEF---------------------------------DFSTATEMVIPAGRQVNLSIESNDVIHSFWIPRLNGKRDAVPGRTHTLSMESDEPGYFFGQCTEFCGLSHGVMRMRVIALPQDEYDAWLEEQAQDVGEPETASQARGREAFEANCASCHSIR 278          
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: UPI001AA0647F (cytochrome c oxidase subunit II n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA0647F)

HSP 1 Score: 195 bits (496), Expect = 1.970e-57
Identity = 108/210 (51.43%), Postives = 130/210 (61.90%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKLEEKNEPTELDVMVIGQQWWWEYRYDVDGDGFFRDADGDGEIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITPADVPTDES-ALAGRTLFQANCASCHVI 209
            WT LPA++LA ++V TVI+I KLE++++   L V V GQQWWW Y+YDVDGDG +   DG G                          D++ ANELVIPAG +V LTI+S DVIHS+WIP LNGK+DAVPG    W IEAD+ G Y G CTE+CGLSHA MRM   AL+ A +D W ANQ  PA  P   S A AG   F   CA CHV+
Sbjct:  103 WTALPALILAAIAVFTVITIIKLEQRSDDA-LAVRVYGQQWWWSYQYDVDGDGSY---DGQG--------------------------DITTANELVIPAGREVSLTISSHDVIHSFWIPALNGKKDAVPGMDSHWKIEADQPGVYMGQCTEFCGLSHANMRMVVRALDPAQFDEWVANQQRPARSPEPGSLAAAGEAQFGNLCAQCHVV 282          
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: A0A7K2EB10_9ACTN (Cytochrome c oxidase subunit 2 n=2 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7K2EB10_9ACTN)

HSP 1 Score: 194 bits (494), Expect = 5.760e-57
Identity = 103/211 (48.82%), Postives = 128/211 (60.66%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKLEEKNEPTE-LDVMVIGQQWWWEYRYDVDGDGFFRDADGDGEIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITPA-DVPTDESALAGRTLFQANCASCHVI 209
            WTI+P I+LAV+SV  +IS+ +L E +   + L V V+GQQWWWE++Y +DGD                                  P D+  ANELVIP   QV L ITSRDVIHS+WIPRLNGKRDAVPGR H W IEADE G+Y G CTE+CGLSHA MRM  V LE A+W+ W   Q+  A  +   +    G+ +F ANCA+CHV+
Sbjct:  123 WTIIPTILLAVISVFALISLVELNEVSAAEDDLRVTVVGQQWWWEFQYHLDGD-------------------------------TSTPPDIVTANELVIPVYQQVPLEITSRDVIHSFWIPRLNGKRDAVPGRTHPWVIEADEPGRYMGQCTEFCGLSHAYMRMYAVVLEPAEWEEWVQGQLVDAAPLEPGDPGYEGQEVFLANCANCHVV 302          
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: A0A349B924_9ACTN (Cytochrome c oxidase subunit 2 n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B924_9ACTN)

HSP 1 Score: 193 bits (490), Expect = 1.400e-56
Identity = 102/209 (48.80%), Postives = 127/209 (60.77%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKLEEKNEPTELDVMVIGQQWWWEYRYDVDGDGFFRDADGDGEIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITPADVPTDESALAGRTLFQANCASCHVI 209
            WT LPA++LA ++V TV +I  L E        + V+GQQWWW Y YD+DGDG + D D            G E+  E+         D+ VANE+VIPAG  V L I +RDVIHS+WIP LNGK+DAVPGR H  S+EADE G Y G CTEYCGLSHA MRM   AL +A+++ W   Q+ PA  P      AG  +F   CASCH++
Sbjct:  106 WTALPAVILAFMAVFTVSTILDLAEDPGEEATRIRVVGQQWWWSYDYDIDGDGVYADDDVI--------APGIENPEEYET-------DIEVANEMVIPAGKPVYLEIEARDVIHSFWIPALNGKKDAVPGRTHYLSLEADEPGTYVGQCTEYCGLSHAYMRMVVHALPEAEYEAWVEEQLAPATEPQGAEEQAGAEVFAGRCASCHLV 299          
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: A0A6N7FH09_9ACTN (Cytochrome c oxidase subunit 2 n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6N7FH09_9ACTN)

HSP 1 Score: 192 bits (488), Expect = 7.680e-56
Identity = 99/210 (47.14%), Postives = 129/210 (61.43%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKLEEKNEPTELDVMVIGQQWWWEYRYDVDGDGFFRDADGDGEIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITPADVPTD-ESALAGRTLFQANCASCHVI 209
            WTILPA++LAV++VPTV +++ L E  +   + V V GQQWWW +RYD+DGDG F     DG                        P+D++ A ELV+PA  +V L +TS DVIHS+WIP+LNGKRD VPG  H W ++AD  G Y G CTE+CGLSHA MRM+ VA+   ++  W A+Q  PA VP D E+A+ G   F   C +CH I
Sbjct:  129 WTILPAVILAVIAVPTVATVFSLFEPRDEA-MTVEVTGQQWWWSFRYDIDGDGEF-----DG------------------------PEDITTATELVVPADTEVALRMTSEDVIHSFWIPQLNGKRDVVPGSVHDWWVQADAPGYYLGQCTEFCGLSHAYMRMAVVAVTDDEFSQWVADQQAPATVPEDDEAAMRGLETFVQQCTTCHQI 308          
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: A0A0C1UEM0_9ACTN (Cytochrome c oxidase subunit 2 n=2 Tax=unclassified Actinomycetia TaxID=52018 RepID=A0A0C1UEM0_9ACTN)

HSP 1 Score: 191 bits (484), Expect = 1.070e-55
Identity = 105/225 (46.67%), Postives = 138/225 (61.33%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKL------------EEKNEPTELDVMVIGQQWWWEYRYDVDGDGFFRDADGDGEIWGQDGVGGDEDDREWPLEVA--LDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITP--ADVPTDESALAGRTLFQANCASCHVI 209
            WTI+P ++LAVVSV T+I++  +            EE++   E +V+VIGQQWWWE+RY  DG                DGV          L  A  L P D+  A +LV+PAG +++L+ITSRDVIHS+WIP LNGKRDA PGR H W +EADE G Y G CTE+CGLSH+RMRM  +ALE  D+  W   Q+T   +D+ T+E+   G T+F+  CA CHV+
Sbjct:   95 WTIIPTLILAVVSVFTLITLSSINSTDTNEVMITVEEESVLWEPEVVVIGQQWWWEFRYYFDG---------------LDGV---------DLSDARNLPPADIVTAGQLVMPAGQEIELSITSRDVIHSFWIPALNGKRDAAPGRVHPWKLEADEPGVYFGQCTEFCGLSHSRMRMQAIALEPEDFQIWVDEQLTDQDSDLITNEAVSRGLTVFENQCARCHVV 295          
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: A0A7X6P1Z3_9ACTN (Cytochrome c oxidase subunit 2 n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6P1Z3_9ACTN)

HSP 1 Score: 191 bits (484), Expect = 1.100e-55
Identity = 97/216 (44.91%), Postives = 128/216 (59.26%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKLEEKNEPTELDVMVIGQQWWWEYRYDVDGDGFFRDADGDGEIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITPADVPTDES---------ALAGRTLFQANCASCH 207
            WTI PA++LA ++V  V +IW+LE++++P  + V V GQQWWWEYRYDVD DG         EI                        D+  AN++V+PAG  +DL I S DVIHS+WIP LNGK+DAVPGR H W+I+A + G Y G CTE+CGLSHA MRM   A+  A+++ W   Q  PA++P D +          L G   F A+CA+CH
Sbjct:  108 WTIAPAVLLAFLAVFNVQAIWELEKRDDPNMISVEVYGQQWWWEYRYDVDSDG---------EI------------------------DIITANQMVVPAGTLIDLDIRSNDVIHSFWIPTLNGKKDAVPGRTHHWTIQAHKPGLYEGTCTEFCGLSHAHMRMEVKAVTTAEYEQWVEEQTAPANIPEDPTPDDSSDDDLVLTGYKAFVASCATCH 290          
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Match: A0A6L8GYM7_9ACTN (Cytochrome c oxidase subunit 2 n=4 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A6L8GYM7_9ACTN)

HSP 1 Score: 191 bits (485), Expect = 1.320e-55
Identity = 101/211 (47.87%), Postives = 127/211 (60.19%), Query Frame = 0
Query:    1 WTILPAIVLAVVSVPTVISIWKLEEKNEPTE-LDVMVIGQQWWWEYRYDVDGDGFFRDADGDGEIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPAGVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWCTEYCGLSHARMRMSTVALEQADWDTWFANQITPA-DVPTDESALAGRTLFQANCASCHVI 209
            WTI+P I+LAV+SV T+IS+ +L E +   + L V V+GQQWWWE++Y +DGD                                  P D+  ANELV+P   QV L ITSRDVIHS+WIPRLNGKRDAVPGR H W IEA+E G+Y G CTE+CGLSHA MRM  V L   +W+ W   QI  A  +   +    G+ +F ANCA+CHV+
Sbjct:  125 WTIIPTILLAVISVFTLISLVELNEVSAAEDDLRVTVVGQQWWWEFQYHLDGD-------------------------------TSTPPDIVTANELVMPVRQQVPLEITSRDVIHSFWIPRLNGKRDAVPGRTHPWVIEANEVGRYMGQCTEFCGLSHAYMRMYAVVLSPEEWEEWVHGQIVDAAPLEPGDPGFEGQEVFLANCANCHVV 304          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig90024.20861.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Y2ILX0_9ACTN5.240e-9764.73Cytochrome-c oxidase n=1 Tax=Acidimicrobiales bact... [more]
A0A7Y2DLJ3_9ACTN1.680e-9364.41Cytochrome-c oxidase n=1 Tax=Acidimicrobiales bact... [more]
A0A5Q2RQL6_9ACTN9.660e-5948.10Cytochrome c oxidase subunit 2 n=2 Tax=Actinomarin... [more]
UPI001AA0647F1.970e-5751.43cytochrome c oxidase subunit II n=1 Tax=Rhabdother... [more]
A0A7K2EB10_9ACTN5.760e-5748.82Cytochrome c oxidase subunit 2 n=2 Tax=Acidimicrob... [more]
A0A349B924_9ACTN1.400e-5648.80Cytochrome c oxidase subunit 2 n=1 Tax=Acidimicrob... [more]
A0A6N7FH09_9ACTN7.680e-5647.14Cytochrome c oxidase subunit 2 n=1 Tax=Acidimicrob... [more]
A0A0C1UEM0_9ACTN1.070e-5546.67Cytochrome c oxidase subunit 2 n=2 Tax=unclassifie... [more]
A0A7X6P1Z3_9ACTN1.100e-5544.91Cytochrome c oxidase subunit 2 n=1 Tax=Actinomycet... [more]
A0A6L8GYM7_9ACTN1.320e-5547.87Cytochrome c oxidase subunit 2 n=4 Tax=Acidimicrob... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01166CYCOXIDASEIIcoord: 5..25
score: 27.66
coord: 88..109
score: 28.54
coord: 132..149
score: 22.89
coord: 112..132
score: 59.66
coord: 28..47
score: 36.34
coord: 150..167
score: 34.94
NoneNo IPR availableGENE3D2.60.40.2600coord: 27..210
e-value: 6.9E-48
score: 165.4
NoneNo IPR availablePANTHERPTHR22888CYTOCHROME C OXIDASE, SUBUNIT IIcoord: 1..185
NoneNo IPR availablePANTHERPTHR22888:SF17coord: 1..185
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..210
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.639
IPR002429Cytochrome c oxidase subunit II-like C-terminalPFAMPF00116COX2coord: 90..163
e-value: 3.9E-18
score: 65.5
IPR002429Cytochrome c oxidase subunit II-like C-terminalPROSITEPS50857COX2_CUAcoord: 29..179
score: 31.398
IPR014222Cytochrome c oxidase, subunit IITIGRFAMTIGR02866TIGR02866coord: 1..177
e-value: 4.4E-45
score: 151.7
IPR001505Copper centre Cu(A)PROSITEPS00078COX2coord: 113..161
IPR011759Cytochrome C oxidase subunit II, transmembrane domainPROSITEPS50999COX2_TMcoord: 1..27
score: 10.981
IPR009056Cytochrome c-like domainPROSITEPS51007CYTCcoord: 190..210
score: 7.378
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 29..208

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig90024contigM-pyrifera_M_contig90024:166..795 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig90024.20861.1mRNA_M-pyrifera_M_contig90024.20861.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig90024 166..795 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig90024.20861.1 ID=prot_M-pyrifera_M_contig90024.20861.1|Name=mRNA_M-pyrifera_M_contig90024.20861.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=210bp
WTILPAIVLAVVSVPTVISIWKLEEKNEPTELDVMVIGQQWWWEYRYDVD
GDGFFRDADGDGEIWGQDGVGGDEDDREWPLEVALDPDDLSVANELVIPA
GVQVDLTITSRDVIHSYWIPRLNGKRDAVPGRFHTWSIEADEAGKYTGWC
TEYCGLSHARMRMSTVALEQADWDTWFANQITPADVPTDESALAGRTLFQ
ANCASCHVIR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002429CcO_II-like_C
IPR014222Cyt_c_oxidase_su2
IPR001505Copper_CuA
IPR011759Cyt_c_oxidase_su2_TM_dom
IPR009056Cyt_c-like_dom
IPR008972Cupredoxin