mRNA_M-pyrifera_M_contig109972.2086.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: A0A7K1Z9W3_9ACTN (UDP-N-acetylmuramate--L-alanine ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z9W3_9ACTN) HSP 1 Score: 269 bits (688), Expect = 1.060e-85 Identity = 136/200 (68.00%), Postives = 160/200 (80.00%), Query Frame = 1
Query: 1 FEEFASGATTRVLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
F EF GA V+CADD ALA+ +G VTYGT+ ADY++V+I + R+SV FSL H G D+ + LPTPGLHNA NAAAA V L LGAP DAA+RAL +FGGVARR+EFRGEA GV FVDDYAHLP EV+AA+GAA DG+W R+VAVFQPHRYSR A L Q+FAD+F AD++VVTD+YSAGETPRPGV+GKLVVDA
Sbjct: 203 FVEFGDGAANCVMCADDRDGFALAQRLGAVTYGTTSAADYQLVEIVKSRASVSFSLKHLGEDVVSVDLPTPGLHNALNAAAAVVVALQLGAPADAASRALSQFGGVARRYEFRGEASGVTFVDDYAHLPAEVQAALGAAEDGNWKRIVAVFQPHRYSRIATLGQDFADAFLQADEVVVTDIYSAGETPRPGVTGKLVVDA 402
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: A0A2E8LAP0_9ACTN (UDP-N-acetylmuramate--L-alanine ligase n=7 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LAP0_9ACTN) HSP 1 Score: 269 bits (687), Expect = 1.310e-85 Identity = 131/200 (65.50%), Postives = 155/200 (77.50%), Query Frame = 1
Query: 1 FEEFASGATTRVLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
F +FA ATT + CADD G+ +A AV G+TYGT++ ADYRMVDIE R+SV F++ HDG ++ R+ LPTPG+HNARNAAAA V + A AL RFGGVARRFEFRGE DGV FVDDYAHLPTEVEAA+ AA DG W R+V VFQPHRYSRTAALWQ+FA F AD LVVTD+Y++GE PRPG++GKL+VDA
Sbjct: 203 FVQFADAATTSIYCADDPGAMQVASAVPGITYGTAEHADYRMVDIETGRASVAFTIRHDGAEVARVELPTPGMHNARNAAAALVATIAXXXXXXXXAMALARFGGVARRFEFRGEVDGVTFVDDYAHLPTEVEAALAAAADGGWERIVCVFQPHRYSRTAALWQDFAHGFGGADVLVVTDIYASGENPRPGITGKLIVDA 402
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: A0A3M2GK69_ACTSX (UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2GK69_ACTSX) HSP 1 Score: 255 bits (652), Expect = 2.970e-80 Identity = 130/201 (64.68%), Postives = 153/201 (76.12%), Query Frame = 1
Query: 1 FEEFASGATTRVLCADDEGSAALARAVG-GVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
F FA+ A V+CADD G+ ALA + VTYGT++ AD R+VD+ER + F + +G LGRI LP PGLHNA +A AA LL GAPF AA ALGRFGGVARRFE+RGEADGV FVDDYAHLP+EV+AA+ AARDG+W RVV VFQPHRYSRTAALW++FAD+F AD L +T +Y AGE PRPGV+GKLVVDA
Sbjct: 211 FATFAAAAPRCVVCADDPGARALAETLDTAVTYGTAEGADLRLVDVERWADGIAFGVVWNGEHLGRIELPVPGLHNALDAGAAVAAALLAGAPFAAAVAALGRFGGVARRFEWRGEADGVTFVDDYAHLPSEVKAAIAAARDGEWRRVVVVFQPHRYSRTAALWRDFADAFTGADLLAITGIYPAGERPRPGVTGKLVVDA 411
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: UPI001E394BF5 (UDP-N-acetylmuramate--L-alanine ligase n=2 Tax=Rhabdothermincola sp. EGI L10124 TaxID=2903142 RepID=UPI001E394BF5) HSP 1 Score: 253 bits (647), Expect = 2.760e-79 Identity = 129/190 (67.89%), Postives = 146/190 (76.84%), Query Frame = 1
Query: 31 RVLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
RV+CADD ++AL RA VTYGT+ DADYR+VD++ R V F LH G LG + LP PG HNARNAAAA L LG F AA AL RF GVARRF+FRGEA GV FVDDYAHLPTEV AA+GAA DG W+RVV VFQPHRYSRT ALW EFAD+FE AD +V+TDVY++GE PRPG+SGKLVVDA
Sbjct: 238 RVVCADDPVASALGRAHDAVTYGTAADADYRLVDLQSGRGGVRFDLHRRGQLLGEVVLPVPGAHNARNAAAAVTLALELGVDFAPAAAALARFAGVARRFQFRGEAAGVTFVDDYAHLPTEVGAALGAALDGGWSRVVVVFQPHRYSRTEALWPEFADAFEGADAVVITDVYASGEMPRPGISGKLVVDA 427
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: A0A2N5JUQ1_9ACTN (UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A2N5JUQ1_9ACTN) HSP 1 Score: 252 bits (644), Expect = 3.240e-79 Identity = 134/201 (66.67%), Postives = 151/201 (75.12%), Query Frame = 1
Query: 1 FEEF-ASGATTRVLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
FE F A+ R++CADD + LARA +TYGT + ADYRMV IER RS V F + +G DLG I LP PGLHNARNA AA VT LLLGAPF A ARAL +GGVARRF+FRGE +GV FVDDYAHLP EVEAA+ AARDG W RVV FQPHR+SRT A+ +FA SF AAD +VVTDVY AGE PRPGVSGK+VV A
Sbjct: 202 FERFLAATPGPRLVCADDPVARRLARATDALTYGTDEAADYRMVGIERGRSRVRFVVEREGVDLGEIVLPVPGLHNARNACAALVTALLLGAPFAAGARALAGYGGVARRFQFRGEREGVTFVDDYAHLPGEVEAALAAARDGGWRRVVCAFQPHRFSRTEAIGADFATSFAAADVVVVTDVYPAGEAPRPGVSGKIVVHA 402
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: A0A7X6ATI7_9ACTN (UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ATI7_9ACTN) HSP 1 Score: 251 bits (640), Expect = 9.070e-79 Identity = 134/200 (67.00%), Postives = 151/200 (75.50%), Query Frame = 1
Query: 1 FEEFASGATTRVLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
FE FAS A TRV+CADD GSAALA AVG VTYGT + ADYR+ D+ R+S+ FS+ H+GT+L RI LPTPGLHNARNA AA VTG LLGAP DAA RALGRFGGVARRFEFRGEA GVVFVDDYAHLP+EV A + AARDGDW+ ADSF ADQ+V+TD+Y AGETPRPGV+GKLV+DA
Sbjct: 203 FETFASDAATRVMCADDPGSAALAAAVGAVTYGTGEGADYRISDVVAARASIAFSVVHEGTELVRIDLPTPGLHNARNATAAFVTGTLLGAPVDAAVRALGRFGGVARRFEFRGEAAGVVFVDDYAHLPSEVAAMLAAARDGDWSX--------------------ADSFAQADQVVLTDIYPAGETPRPGVTGKLVLDA 382
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: A0A538LMN7_9ACTN (UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LMN7_9ACTN) HSP 1 Score: 246 bits (627), Expect = 1.360e-76 Identity = 127/201 (63.18%), Postives = 146/201 (72.64%), Query Frame = 1
Query: 1 FEEFASGAT-TRVLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
FE F +GA RV+CADD +A L VG +YG S A YRMVD++ HRS+ F+L H+G LGR+ LP PGLHNA NA A VTGL LGA AA RAL RF GVARRF+FRGE GV FVDDYAHLP EV + AAR G W R+V VFQPHRYSRTA LW++FAD+F AD L+VTDVY AGE PRPGVSG+L+V A
Sbjct: 206 FETFLTGAPGPRVVCADDPVAARLGAQVGATSYGVSRAATYRMVDVDSHRSNTTFTLEHEGERLGRLELPVPGLHNATNATGAVVTGLALGADMAAAQRALARFAGVARRFQFRGEHGGVSFVDDYAHLPGEVAPTLAAARAGGWRRIVCVFQPHRYSRTATLWRDFADAFIGADILIVTDVYPAGERPRPGVSGQLIVQA 406
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: A0A538B4W1_9ACTN (UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538B4W1_9ACTN) HSP 1 Score: 240 bits (613), Expect = 1.010e-74 Identity = 122/190 (64.21%), Postives = 142/190 (74.74%), Query Frame = 1
Query: 31 RVLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
++ ADD + L RA G +TYGT+ DADYRM+D+E R FSL +GR+ LP PG HNARNAAAAAV L +G PFDA ARALG +GGVARRF+FRGE GV FVDDYAHLPTEV AA+ A+DG W RVV VFQPHRYSRT AL +FA++F AD L+VTDVY AGE PRPGVSGKL+V+A
Sbjct: 193 KITSADDTLANRLGRANGALTYGTAADADYRMLDLESRREGTSFSLARGADVIGRLRLPVPGEHNARNAAAAAVAALEIGVPFDAVARALGHYGGVARRFQFRGEGRGVTFVDDYAHLPTEVRAALATAKDGGWRRVVCVFQPHRYSRTQALAPDFANAFVDADLLIVTDVYPAGEAPRPGVSGKLIVNA 382
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: A0A7K1YT09_9ACTN (UDP-N-acetylmuramate--L-alanine ligase n=9 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1YT09_9ACTN) HSP 1 Score: 238 bits (608), Expect = 1.120e-73 Identity = 122/200 (61.00%), Postives = 145/200 (72.50%), Query Frame = 1
Query: 1 FEEFASGATTRVLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
FE+F + + R++CADD G+A L AVG TYGT AD+RMVD+ S EF L + T LG + LPTPGLHNA NA AA V L G+ F AARAL RFGGVARRFEFRG+A GV FVDDYAHLP+EV AA+ AAR GDW RVV VFQPHRYSR A++ +FA SF AD LV+T +Y +GE PRPGV+ K+V+DA
Sbjct: 204 FEQFLASSRHRIVCADDVGAARLGAAVGATTYGTHPGADFRMVDVSLKMPSCEFELWSEETRLGLVTLPTPGLHNALNATAAIVAALTAGSSFADAARALARFGGVARRFEFRGDAAGVTFVDDYAHLPSEVAAALAAARTGDWRRVVCVFQPHRYSRVASIGSDFAHSFVGADHLVLTGIYPSGEAPRPGVTSKIVLDA 403
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Match: A0A6I3EX03_9ACTN (UDP-N-acetylmuramate--L-alanine ligase n=2 Tax=root TaxID=1 RepID=A0A6I3EX03_9ACTN) HSP 1 Score: 238 bits (607), Expect = 1.800e-73 Identity = 114/189 (60.32%), Postives = 140/189 (74.07%), Query Frame = 1
Query: 34 VLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSSVEFSLHHDGTDLGRIHLPTPGLHNARNAAAAAVTGLLLGAPFDAAARALGRFGGVARRFEFRGEADGVVFVDDYAHLPTEVEAAVGAARDGDWNRVVAVFQPHRYSRTAALWQEFADSFEAADQLVVTDVYSAGETPRPGVSGKLVVDA 600
++CADD+ + L G +TYG S +AD R+VD+ R F + +G LGR+HLP PG+HNA NA A L +G F A++ALG FGGV RRF+ RGE GV F+DDYAHLPTE+ AAV AARDGDW R+V VFQPHRYSRTA+LW EFAD+FE ADQLV+TD+Y+AGE+PR GVSGKL+VDA
Sbjct: 223 IVCADDDVALELGSITGALTYGQSPEADVRIVDLHSGRDGCTFGVERNGVPLGRVHLPLPGVHNALNACGAIAVALEVGIDFAVASKALGEFGGVGRRFQTRGETCGVTFIDDYAHLPTEIAAAVSAARDGDWRRLVVVFQPHRYSRTASLWHEFADAFEGADQLVLTDIYAAGESPREGVSGKLIVDA 411 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109972.2086.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109972.2086.1 >prot_M-pyrifera_M_contig109972.2086.1 ID=prot_M-pyrifera_M_contig109972.2086.1|Name=mRNA_M-pyrifera_M_contig109972.2086.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp FEEFASGATTRVLCADDEGSAALARAVGGVTYGTSDDADYRMVDIERHRSback to top mRNA from alignment at M-pyrifera_M_contig109972:2..601- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109972.2086.1 ID=mRNA_M-pyrifera_M_contig109972.2086.1|Name=mRNA_M-pyrifera_M_contig109972.2086.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=600bp|location=Sequence derived from alignment at M-pyrifera_M_contig109972:2..601- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109972:2..601- >mRNA_M-pyrifera_M_contig109972.2086.1 ID=mRNA_M-pyrifera_M_contig109972.2086.1|Name=mRNA_M-pyrifera_M_contig109972.2086.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1200bp|location=Sequence derived from alignment at M-pyrifera_M_contig109972:2..601- (Macrocystis pyrifera P11B4 male)back to top |