prot_M-pyrifera_M_contig89985.20854.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89985.20854.1
Unique Nameprot_M-pyrifera_M_contig89985.20854.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length195
Homology
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A2D6U6N2_9ACTN (Endonuclease NucS n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U6N2_9ACTN)

HSP 1 Score: 361 bits (926), Expect = 2.610e-125
Identity = 172/194 (88.66%), Postives = 185/194 (95.36%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 194
            MVKADGCVA+HADGGAYKPLNWMNAPNR+  D  AGVWTVTSPKGEVLTITF DV+SD +HEMG DPGLQKDGVEAHLQ+LLADDPTSI DGL+LVRREYPTDIGPVDLMCRDA+G+AVA+EVKRRGEIDGVEQLTRYLEFLNRDP+LRPVRG++VAQEIKPQAKVLA+DRDI WVEVDYDELRGIESPNLKLF
Sbjct:   28 MVKADGCVAVHADGGAYKPLNWMNAPNRLTMDDEAGVWTVTSPKGEVLTITFEDVLSDVAHEMGIDPGLQKDGVEAHLQQLLADDPTSIQDGLKLVRREYPTDIGPVDLMCRDAEGIAVAVEVKRRGEIDGVEQLTRYLEFLNRDPLLRPVRGVFVAQEIKPQAKVLAADRDIDWVEVDYDELRGIESPNLKLF 221          
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A7K1Z800_9ACTN (Endonuclease NucS n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z800_9ACTN)

HSP 1 Score: 341 bits (874), Expect = 2.190e-117
Identity = 164/194 (84.54%), Postives = 179/194 (92.27%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 194
            MVKADG VAIHADGGAYKPLNWMN PNR+ ED   G+WTVT+PKGEVLTIT H+VISDSS EMG DPGLQKDGVEAHLQ+LLADDPTSI +GLRLVRRE+PT IGPVDLMCRDADG+AVA+EVKRRGEIDGVEQL+RYL+FLNRDP LRPVRG++VAQEIKPQAKVLA DR+I  VEVDYDELRGIESPNL+LF
Sbjct:   28 MVKADGSVAIHADGGAYKPLNWMNPPNRLAEDAEEGIWTVTNPKGEVLTITLHEVISDSSFEMGRDPGLQKDGVEAHLQELLADDPTSITEGLRLVRREFPTSIGPVDLMCRDADGVAVAVEVKRRGEIDGVEQLSRYLDFLNRDPALRPVRGVFVAQEIKPQAKVLAEDREIECVEVDYDELRGIESPNLRLF 221          
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A3M2HLJ3_ACTSX (Endonuclease NucS n=1 Tax=Actinomyces sp. TaxID=29317 RepID=A0A3M2HLJ3_ACTSX)

HSP 1 Score: 338 bits (867), Expect = 2.550e-116
Identity = 160/194 (82.47%), Postives = 179/194 (92.27%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 194
            MVKADGCVA+HADGGAYKPLNWMNAPNR++ D  AGVW VT+PKGE LTIT  +++SD++HEMGTDPGLQKDGVEAHLQ LLA DPTSI +GLRLVRREYPT+IGPVDL+CRDA+G AVA+EVKRRGEIDGVEQLTRYLE+LNRDP LRPVRG++VAQ+IKPQAKVLA DRDIA VEVDYDELRGIESP L+LF
Sbjct:   28 MVKADGCVAVHADGGAYKPLNWMNAPNRLVIDDDAGVWRVTNPKGESLTITVEEILSDTTHEMGTDPGLQKDGVEAHLQALLAADPTSIGEGLRLVRREYPTEIGPVDLLCRDAEGRAVAVEVKRRGEIDGVEQLTRYLEYLNRDPSLRPVRGVFVAQQIKPQAKVLAGDRDIACVEVDYDELRGIESPELRLF 221          
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A2E5ZFS1_9ACTN (Endonuclease NucS n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E5ZFS1_9ACTN)

HSP 1 Score: 323 bits (829), Expect = 1.860e-110
Identity = 159/199 (79.90%), Postives = 174/199 (87.44%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRIIE-----DPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 194
            MVKADGCVA+HADGGAYKPLNWMNAPN + E     D    VWTV SPK EVLTIT H+V+++   EMG DPGLQKDGVEAHLQ+LLA DPTSIADGLRLVRRE+PTDIGPVDL+ RDADG AVA+EVKRRGEIDGVEQLTRYL+FLNRDPMLRPVRGI+VAQEI+PQA+VLA DRDI WVEVDYDELRGIES  L+LF
Sbjct:   28 MVKADGCVAVHADGGAYKPLNWMNAPNTLTEVASGEDDVKSVWTVRSPKDEVLTITVHEVLAELDQEMGVDPGLQKDGVEAHLQELLAADPTSIADGLRLVRREFPTDIGPVDLLXRDADGEAVAVEVKRRGEIDGVEQLTRYLDFLNRDPMLRPVRGIFVAQEIRPQARVLADDRDIGWVEVDYDELRGIESDALRLF 226          
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A6I3AIG5_9ACTN (Endonuclease NucS n=2 Tax=root TaxID=1 RepID=A0A6I3AIG5_9ACTN)

HSP 1 Score: 323 bits (828), Expect = 2.220e-110
Identity = 152/194 (78.35%), Postives = 173/194 (89.18%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 194
            MVKADGCVAIHADGGAYKPLNWMNAPNR++ D  AG+W VT+ KGE LTIT H+++++ +HE+G DPGL+KDGVEAHLQ+LLA +PT IADGLRLVRREYPTDIGPVDL+CRDA+G  VAIE+KRRGEIDGVEQL RYLEFLNRDP+LRPVRGI+VAQEIKPQA+VLA  R I WVEVDYDELRGI S  L+LF
Sbjct:   28 MVKADGCVAIHADGGAYKPLNWMNAPNRLVIDEAAGLWVVTNAKGETLTITVHEILAEVNHELGVDPGLRKDGVEAHLQELLAANPTVIADGLRLVRREYPTDIGPVDLLCRDANGATVAIEIKRRGEIDGVEQLARYLEFLNRDPLLRPVRGIFVAQEIKPQARVLAGTRSIGWVEVDYDELRGIVSEELRLF 221          
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A7Y2GKA9_9ACTN (Endonuclease NucS n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7Y2GKA9_9ACTN)

HSP 1 Score: 322 bits (825), Expect = 5.940e-110
Identity = 158/194 (81.44%), Postives = 174/194 (89.69%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 194
            MVKADGCVAIHADGGAYKPLNWMNAPNR+ E      WTV++ KGE LTIT  +V+SDS  EMG DPGLQKDGVEAHLQ+LLA +P SIADGLRLVRREYPTDIGPVDL+CRDA+G+AVAIEVKRRGEIDGVEQLTRYL+FLNRDPMLRPVRG++VAQEIKPQAKVLA+DRDI WV VDY+ELRGIE+  LKLF
Sbjct:   28 MVKADGCVAIHADGGAYKPLNWMNAPNRLTEHDDH--WTVSNKKGETLTITLEEVLSDSDFEMGVDPGLQKDGVEAHLQELLAANPESIADGLRLVRREYPTDIGPVDLLCRDAEGIAVAIEVKRRGEIDGVEQLTRYLDFLNRDPMLRPVRGVFVAQEIKPQAKVLATDRDIDWVVVDYNELRGIETDELKLF 219          
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A2E9W0Q9_9ACTN (Endonuclease NucS n=4 Tax=Actinobacteria TaxID=201174 RepID=A0A2E9W0Q9_9ACTN)

HSP 1 Score: 318 bits (816), Expect = 1.390e-108
Identity = 153/194 (78.87%), Postives = 173/194 (89.18%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 194
            MVKADGCVAIHADGGAYKPLNWM APN +IE+ G   W+V + KGE+LTIT H+VISD+   +G DPGLQKDGVEAHLQ+LLA DPT +AD LRLVRREYPT +GPVDL+CRDADG+AVAIEVKRRGEIDGVEQLTRYL+FLNRDPMLRPVRG++VAQE+KPQA+VLA DRDI W+EVDYD+LRGIES  LKLF
Sbjct:   28 MVKADGCVAIHADGGAYKPLNWMTAPNTMIEEEGC--WSVRNSKGEILTITLHEVISDTESPLGDDPGLQKDGVEAHLQELLAADPTFMADDLRLVRREYPTAVGPVDLLCRDADGVAVAIEVKRRGEIDGVEQLTRYLDFLNRDPMLRPVRGMFVAQEVKPQARVLAEDRDITWLEVDYDDLRGIESNELKLF 219          
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A520XR09_9ACTN (Endonuclease NucS n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XR09_9ACTN)

HSP 1 Score: 318 bits (815), Expect = 1.980e-108
Identity = 151/193 (78.24%), Postives = 171/193 (88.60%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKL 193
            MVKADGCVA+HADGGAYKPLNWMN+PNR+IED     W VTSPKGE L IT H++ SD SHE+GTDPGLQKDGVEAH+Q+LLA DPT+IADG RLVRREYPT+IGPVDL+CRD D   +A+EVKRRGEIDGVEQL+RYLEFLN+DP+L PVRGI+VAQ IKPQAKVLA++RDI  VEVDYDELRGIESP L+L
Sbjct:   28 MVKADGCVAVHADGGAYKPLNWMNSPNRLIED--GAEWRVTSPKGETLIITMHEIFSDISHELGTDPGLQKDGVEAHIQELLAADPTTIADGFRLVRREYPTEIGPVDLLCRDEDDAVIAVEVKRRGEIDGVEQLSRYLEFLNQDPVLNPVRGIFVAQSIKPQAKVLATERDITCVEVDYDELRGIESPQLRL 218          
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A7C7SAC7_9ACTN (Endonuclease NucS n=4 Tax=root TaxID=1 RepID=A0A7C7SAC7_9ACTN)

HSP 1 Score: 318 bits (815), Expect = 2.900e-108
Identity = 158/203 (77.83%), Postives = 174/203 (85.71%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRII------EDPGAG---VWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 194
            MVKADGCVAIHADGGAYKPLNWM +PN +       ++ GAG   VWTV +P GEVLTIT H+V+SD SHEMG DPGLQKDGVEAHLQ LLA DPT++ DGLRLVRREYPTDIGPVDL+CRDADG+AVA+EVKRRGEIDGVEQLTRYL+FLNRDPMLRPVRG++VAQEIKPQA+VLA DR I  V VDYDELRGI S  LKLF
Sbjct:   28 MVKADGCVAIHADGGAYKPLNWMTSPNTLAIDGDPDDEDGAGAEAVWTVRNPAGEVLTITLHEVLSDVSHEMGPDPGLQKDGVEAHLQALLAADPTTMGDGLRLVRREYPTDIGPVDLLCRDADGVAVAVEVKRRGEIDGVEQLTRYLDFLNRDPMLRPVRGVFVAQEIKPQARVLAEDRGIGCVVVDYDELRGIRSNELKLF 230          
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Match: A0A800LPU8_9ACTN (Endonuclease NucS n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A800LPU8_9ACTN)

HSP 1 Score: 317 bits (813), Expect = 3.990e-108
Identity = 153/194 (78.87%), Postives = 172/194 (88.66%), Query Frame = 0
Query:    1 MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTITFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREYPTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRPVRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF 194
            MVKADGCVAIHADGGA+KPLNWMNAPNR+ E+ G   W VT+PK E L IT H+++SD+ H++G DPGLQKDGVEAHLQ+LLA DPT++ADGLRLVRRE+PT+IGPVDL+CRDA+G AVAIEVKRRGEIDGVEQLTRYL+FLNRDP L PVRGIYVAQEIKPQAKVLA DR I WV VDYDELRG+ES  LKLF
Sbjct:   28 MVKADGCVAIHADGGAFKPLNWMNAPNRLTEEDG--FWRVTNPKDETLIITLHEILSDTKHDLGVDPGLQKDGVEAHLQELLAADPTTMADGLRLVRREFPTEIGPVDLLCRDAEGNAVAIEVKRRGEIDGVEQLTRYLDFLNRDPTLAPVRGIYVAQEIKPQAKVLAEDRGIDWVVVDYDELRGMESDVLKLF 219          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89985.20854.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D6U6N2_9ACTN2.610e-12588.66Endonuclease NucS n=5 Tax=Acidimicrobiaceae bacter... [more]
A0A7K1Z800_9ACTN2.190e-11784.54Endonuclease NucS n=2 Tax=Acidimicrobiaceae bacter... [more]
A0A3M2HLJ3_ACTSX2.550e-11682.47Endonuclease NucS n=1 Tax=Actinomyces sp. TaxID=29... [more]
A0A2E5ZFS1_9ACTN1.860e-11079.90Endonuclease NucS n=2 Tax=Acidimicrobiaceae bacter... [more]
A0A6I3AIG5_9ACTN2.220e-11078.35Endonuclease NucS n=2 Tax=root TaxID=1 RepID=A0A6I... [more]
A0A7Y2GKA9_9ACTN5.940e-11081.44Endonuclease NucS n=1 Tax=Acidimicrobiales bacteri... [more]
A0A2E9W0Q9_9ACTN1.390e-10878.87Endonuclease NucS n=4 Tax=Actinobacteria TaxID=201... [more]
A0A520XR09_9ACTN1.980e-10878.24Endonuclease NucS n=1 Tax=Acidimicrobiales bacteri... [more]
A0A7C7SAC7_9ACTN2.900e-10877.83Endonuclease NucS n=4 Tax=root TaxID=1 RepID=A0A7C... [more]
A0A800LPU8_9ACTN3.990e-10878.87Endonuclease NucS n=1 Tax=Acidimicrobiia bacterium... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011856tRNA endonuclease-like domain superfamilyGENE3D3.40.1350.10coord: 68..180
e-value: 2.7E-28
score: 99.9
IPR002793Endonuclease NucSPFAMPF01939NucScoord: 1..194
e-value: 1.0E-55
score: 188.6
IPR002793Endonuclease NucSPANTHERPTHR38814FAMILY NOT NAMEDcoord: 1..194
NoneNo IPR availableGENE3D2.70.180.20coord: 1..65
e-value: 7.1E-6
score: 27.3
NoneNo IPR availablePANTHERPTHR38814:SF2coord: 1..194

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89985contigM-pyrifera_M_contig89985:206..790 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89985.20854.1mRNA_M-pyrifera_M_contig89985.20854.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89985 206..796 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89985.20854.1 ID=prot_M-pyrifera_M_contig89985.20854.1|Name=mRNA_M-pyrifera_M_contig89985.20854.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=195bp
MVKADGCVAIHADGGAYKPLNWMNAPNRIIEDPGAGVWTVTSPKGEVLTI
TFHDVISDSSHEMGTDPGLQKDGVEAHLQKLLADDPTSIADGLRLVRREY
PTDIGPVDLMCRDADGMAVAIEVKRRGEIDGVEQLTRYLEFLNRDPMLRP
VRGIYVAQEIKPQAKVLASDRDIAWVEVDYDELRGIESPNLKLF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011856tRNA_endonuc-like_dom_sf
IPR002793Endonuclease_NucS