mRNA_M-pyrifera_M_contig89983.20852.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A2D5AZI6_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5AZI6_9BACT) HSP 1 Score: 180 bits (456), Expect = 2.970e-54 Identity = 84/126 (66.67%), Postives = 106/126 (84.13%), Query Frame = 1
Query: 1 EHFVE--RKEGMKNPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKEL 372
EHFV+ + + NP+HGH FG KWRG+GRMS LDADG+RFTW+GGNTG+ SFEM Q L+LGTDL VKFRLPLL+KG EA+VT++++EERPDGVK+ A+FSEI+ +TR +VQQYA D+ FL+KEL
Sbjct: 143 EHFVQASKSKAPTNPVHGHAFGSKWRGVGRMSALDADGLRFTWNGGNTGLTSFEMGQLLSLGTDLNVKFRLPLLQKGHCEAVVTISEVEERPDGVKLAATFSEIEPETRTAVQQYAADMAFLKKEL 268
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A7C2B4C5_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C2B4C5_9BACT) HSP 1 Score: 175 bits (444), Expect = 3.970e-52 Identity = 83/126 (65.87%), Postives = 103/126 (81.75%), Query Frame = 1
Query: 1 EHFVERKE--GMKNPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKEL 372
EHF+ E G+ NP+HGH F WRG+GRMS LD+DG+RF W+GG+TG++ FEM Q L+LGTDL VKFRLPLLKKG EA VTV+++EERPDGVKI A+FSEIDD TR++V+QYA D+ FL+KEL
Sbjct: 169 EHFLPSAERSGVTNPVHGHSFASNWRGVGRMSALDSDGLRFVWNGGSTGLSPFEMGQMLSLGTDLHVKFRLPLLKKGHCEATVTVSEVEERPDGVKIAAAFSEIDDQTREAVKQYASDMAFLKKEL 294
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A7Y4WIM3_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7Y4WIM3_9BACT) HSP 1 Score: 165 bits (417), Expect = 2.230e-48 Identity = 77/129 (59.69%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 1 EHFVERKEGMKNPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKELDSTKE 387
EHF+ + NP HG FGG WRG+GRMS LD + +RFTW+GGN+G+ FEM Q L+LGTDL VKFRLPLLKKG EA+VTV+++EERPDGVK+ A+FS+I+ +T +V+QYA D+ FL++EL S E
Sbjct: 143 EHFISEQARKANPAHGPGFGGNWRGVGRMSALDTESLRFTWNGGNSGLTPFEMGQMLSLGTDLIVKFRLPLLKKGHCEAVVTVSEVEERPDGVKLAATFSQIEPETLAAVKQYAADMAFLKRELRSATE 271
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A518BJZ2_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium Pla133 TaxID=2528011 RepID=A0A518BJZ2_9BACT) HSP 1 Score: 164 bits (415), Expect = 4.470e-48 Identity = 76/125 (60.80%), Postives = 97/125 (77.60%), Query Frame = 1
Query: 1 EHFVERKEGM-KNPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKEL 372
+HF+ G NP+HGH+FG WRG+GRMS +DA+G+RFTW GGNTGM FE+ Q LALGT+LKVKFRLPLL+KG + + VT+IEERPDGVK+ F +DD T+ +V+QYAED+ FL+KEL
Sbjct: 144 KHFLPASSGSGTNPVHGHEFGKNWRGVGRMSSVDAEGLRFTWDGGNTGMTPFELGQLLALGTELKVKFRLPLLRKGHVDGLAAVTEIEERPDGVKVAGRFHGLDDQTQAAVRQYAEDMAFLKKEL 268
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A518EU56_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium Poly30 TaxID=2528018 RepID=A0A518EU56_9BACT) HSP 1 Score: 160 bits (404), Expect = 1.880e-46 Identity = 77/123 (62.60%), Postives = 99/123 (80.49%), Query Frame = 1
Query: 4 HFVERKEGMKNPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKEL 372
HFVE+++ KNPLHGH FG W GIGRMSGLD DG+RFTW+GG T + +F+M Q L++GT+L VKFRLPLL++G EA VTV+ +EER DGVK+G F EIDD+TR +V QYA+D+ FL++EL
Sbjct: 143 HFVEQEK-AKNPLHGHAFGDNWAGIGRMSGLDEDGLRFTWNGGKTDLTAFDMGQMLSVGTELLVKFRLPLLQRGYVEAKVTVSFLEERADGVKVGCRFVEIDDETRAAVGQYAQDMAFLKEEL 264
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A523PU81_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A523PU81_9BACT) HSP 1 Score: 157 bits (397), Expect = 2.240e-45 Identity = 75/123 (60.98%), Postives = 94/123 (76.42%), Query Frame = 1
Query: 4 HFVERKEGMKNPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKEL 372
HFV+ + +NP+HGH FGG W GIGRMSGLD G+ FTWSGG T + F+M Q LA+GT L VKFRLPLL++G EA V V +EER D VK+GA F EIDDDTR++V+QYA+D+ FL++EL
Sbjct: 144 HFVKATKKAENPVHGHAFGGNWSGIGRMSGLDESGLLFTWSGGKTDLTPFDMGQMLAIGTQLAVKFRLPLLQRGYCEARVDVNLLEERADSVKVGAEFVEIDDDTREAVRQYAKDMAFLKEEL 266
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A2D5W8U8_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D5W8U8_9BACT) HSP 1 Score: 152 bits (385), Expect = 1.330e-43 Identity = 72/123 (58.54%), Postives = 92/123 (74.80%), Query Frame = 1
Query: 4 HFVERKEGMKNPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKEL 372
HF+E NP+HGH FG W G+GRM+ LD G+ FTW+GGNTG++ F+M Q LALGT+LK+KFRLPL +KG EA+ V D+EER DGV++G FSEIDD+T +V QYA+D+ FLR EL
Sbjct: 142 HFIEAAA-KANPVHGHSFGKNWSGVGRMAALDTSGLAFTWNGGNTGLSPFDMGQMLALGTELKLKFRLPLFQKGYCEALCRVEDLEERADGVRVGLRFSEIDDETVTAVGQYAKDMAFLRDEL 263
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A7C8CVQ3_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C8CVQ3_9BACT) HSP 1 Score: 152 bits (383), Expect = 2.730e-43 Identity = 70/123 (56.91%), Postives = 92/123 (74.80%), Query Frame = 1
Query: 4 HFVERKEGMKNPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKEL 372
HFV NP+HGH FG W GIGRM+GLD +RFTW+GGNT + F MAQF ALGT+ K+KFRLPLL+KG EA+ ++++EERPDG+K+ ASF EID +T+ +V+QYA D+ +L+ EL
Sbjct: 142 HFVAGDGKQTNPVHGHSFGEHWSGIGRMAGLDEKHLRFTWNGGNTDLEPFAMAQFTALGTEWKIKFRLPLLQKGYCEAVACISEVEERPDGIKVQASFKEIDAETQAAVKQYAADMAYLKDEL 264
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A2D6HBR7_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A2D6HBR7_9BACT) HSP 1 Score: 152 bits (385), Expect = 2.880e-43 Identity = 67/113 (59.29%), Postives = 93/113 (82.30%), Query Frame = 1
Query: 34 NPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKEL 372
NP+HGH+FG +W GIGRMSGL + + FTW GGNTG+++F MAQ LALGT+ K+KFRLPLL++G EA+ V+++EER DGVK+ A+FS+ID++TR S++QYA D+ +L+ EL
Sbjct: 181 NPVHGHEFGSRWSGIGRMSGLSEESLSFTWGGGNTGLDAFRMAQLLALGTEWKIKFRLPLLQRGYCEAVAKVSEVEEREDGVKVEATFSDIDEETRASIRQYAADMSYLKDEL 293
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Match: A0A521KHH7_9BACT (Anti-sigma factor antagonist n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KHH7_9BACT) HSP 1 Score: 150 bits (379), Expect = 1.310e-42 Identity = 73/129 (56.59%), Postives = 101/129 (78.29%), Query Frame = 1
Query: 1 EHFV--ERKEGMK---NPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALGTDLKVKFRLPLLKKGMSEAIVTVTDIEERPDGVKIGASFSEIDDDTRQSVQQYAEDLRFLRKEL 372
EHF+ + ++G+ +P G G W GIGRM+ LD +G+RFTW GGNTG+ +FEMAQFLA+GT+L++KF L LLKKGM EA+VTVT++EERPD VK+ A FS++DDD R++++QY++DL FL+ EL
Sbjct: 145 EHFIAEDLRKGVAIPFDPKSGKAGKGGWNGIGRMASLDRNGLRFTWGGGNTGLTAFEMAQFLAIGTELRLKFSLSLLKKGMVEAVVTVTEVEERPDSVKLRARFSKLDDDVRKAIEQYSQDLAFLKSEL 273 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89983.20852.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig89983.20852.1 >prot_M-pyrifera_M_contig89983.20852.1 ID=prot_M-pyrifera_M_contig89983.20852.1|Name=mRNA_M-pyrifera_M_contig89983.20852.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=121bp MKNPLHGHDFGGKWRGIGRMSGLDADGVRFTWSGGNTGMNSFEMAQFLALback to top mRNA from alignment at M-pyrifera_M_contig89983:2..391+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig89983.20852.1 ID=mRNA_M-pyrifera_M_contig89983.20852.1|Name=mRNA_M-pyrifera_M_contig89983.20852.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=390bp|location=Sequence derived from alignment at M-pyrifera_M_contig89983:2..391+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig89983:2..391+ >mRNA_M-pyrifera_M_contig89983.20852.1 ID=mRNA_M-pyrifera_M_contig89983.20852.1|Name=mRNA_M-pyrifera_M_contig89983.20852.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=726bp|location=Sequence derived from alignment at M-pyrifera_M_contig89983:2..391+ (Macrocystis pyrifera P11B4 male)back to top |