mRNA_M-pyrifera_M_contig89971.20848.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89971.20848.1
Unique NamemRNA_M-pyrifera_M_contig89971.20848.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A0A518ABA0_9PLAN (DNA primase n=12 Tax=Gimesia TaxID=1649453 RepID=A0A518ABA0_9PLAN)

HSP 1 Score: 489 bits (1259), Expect = 3.100e-168
Identity = 244/266 (91.73%), Postives = 254/266 (95.49%), Query Frame = 1
Query:    1 PRHSQGGQQPL-EKSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAKSLQQLI 795
            PRH   GQQP  EK+SL++VMKWAE QFHECLM+TSVGEYARRYLMEDRGFTEET+RQF LGFHPDDWQWLVNRSRNR+PEQLLLEAKLIF+KEG +RCSDYFVNRVMFPVHDERKRVVAFGGRILPG DS KLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGD+AGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGA  LQQ+I
Sbjct:  125 PRHQHSGQQPAQEKTSLFEVMKWAETQFHECLMQTSVGEYARRYLMEDRGFTEETIRQFRLGFHPDDWQWLVNRSRNRYPEQLLLEAKLIFKKEGHTRCSDYFVNRVMFPVHDERKRVVAFGGRILPGVDSGKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDSAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAAHLQQMI 390          
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A0A350K969_9PLAN (DNA primase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350K969_9PLAN)

HSP 1 Score: 431 bits (1108), Expect = 1.820e-148
Identity = 212/255 (83.14%), Postives = 237/255 (92.94%), Query Frame = 1
Query:   31 LEKSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAKSLQQLI 795
            +EK+SL+DVMKWAE QFH+CLM T  GE ARRYLMEDRG+TEET++QF LGFHP+DWQWLVNRSR ++PE LL EA+LIF+KEG SR SDYFVNRVMFPV DERKRVVAFGGRILPG+ +  +AKYFNSPES+IFTKSKLLFGLDE+RQ IRETETVVVVEGYTDCITAHQFGVTN VATLGTALTE+HV+YLKRLARKVVLVFDGDTAGQQAAER+LTKFIAQEVDLRILTLPAG+DPA+FLE+QGA+ L+QLI
Sbjct:  113 VEKTSLFDVMKWAEQQFHDCLMNTREGEMARRYLMEDRGYTEETIQQFRLGFHPNDWQWLVNRSRGQYPESLLSEARLIFKKEGHSRYSDYFVNRVMFPVRDERKRVVAFGGRILPGSAAEGIAKYFNSPESIIFTKSKLLFGLDESRQTIRETETVVVVEGYTDCITAHQFGVTNAVATLGTALTETHVSYLKRLARKVVLVFDGDTAGQQAAERSLTKFIAQEVDLRILTLPAGKDPAEFLEEQGAEQLKQLI 367          
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A6C4Z6_9PLAN (DNA primase n=10 Tax=Planctomycetaceae TaxID=126 RepID=A6C4Z6_9PLAN)

HSP 1 Score: 431 bits (1107), Expect = 1.320e-145
Identity = 212/255 (83.14%), Postives = 236/255 (92.55%), Query Frame = 1
Query:   31 LEKSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAKSLQQLI 795
            +EK+SL+DVMKWAE QFH+CLM T  GE ARRYLMEDRG+TEET++QF LGFHP+DWQWLVNRSR  +PE LL EA+LIF+KEG SR SDYFVNRVMFPV DERKRVVAFGGRILPG+ +  +AKYFNSPES+IFTKSKLLFGLDE+RQ IRETETVVVVEGYTDCITAHQFGVTN VATLGTALTE+HV+YLKRLARKVVLVFDGDTAGQQAAER+LTKFIAQEVDLRILTLPAG+DPA+FLE+QGA+ L+QLI
Sbjct:  113 VEKTSLFDVMKWAEQQFHDCLMNTREGEMARRYLMEDRGYTEETIQQFRLGFHPNDWQWLVNRSRGHYPESLLSEARLIFKKEGHSRYSDYFVNRVMFPVRDERKRVVAFGGRILPGSAAEGIAKYFNSPESIIFTKSKLLFGLDESRQTIRETETVVVVEGYTDCITAHQFGVTNAVATLGTALTETHVSYLKRLARKVVLVFDGDTAGQQAAERSLTKFIAQEVDLRILTLPAGKDPAEFLEEQGAEQLKQLI 367          
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A0A518IHJ9_9PLAN (DNA primase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IHJ9_9PLAN)

HSP 1 Score: 422 bits (1084), Expect = 4.300e-142
Identity = 208/255 (81.57%), Postives = 235/255 (92.16%), Query Frame = 1
Query:   31 LEKSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAKSLQQLI 795
            LEK+SL+DVMKWAEAQFH CL+ET  GE+ARRYLME+RG+TEET++QF LGFHPD+WQWLVNR++  +   LL EA+LIF+KE  +R SDYFVNRVMFPV DERKRVVAFGGRILPG+ S  LAKYFNSPES+IFTKSKLLFGLDEARQ IRETETVVVVEGYTDCITAHQFGV+NVVATLGTALTE+HV+YLKRLARKVVLVFDGD AGQQAAER+LTKFI+QEVDL+ILTLPAG+DPADFLE+QGA+ L+QLI
Sbjct:  113 LEKASLFDVMKWAEAQFHHCLLETPEGEFARRYLMEERGYTEETIKQFRLGFHPDNWQWLVNRAQGIYAAPLLAEARLIFKKENHTRYSDYFVNRVMFPVRDERKRVVAFGGRILPGSGSEGLAKYFNSPESIIFTKSKLLFGLDEARQRIRETETVVVVEGYTDCITAHQFGVSNVVATLGTALTETHVSYLKRLARKVVLVFDGDNAGQQAAERSLTKFISQEVDLKILTLPAGKDPADFLEEQGAERLKQLI 367          
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A0A517WRC7_9PLAN (DNA primase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WRC7_9PLAN)

HSP 1 Score: 416 bits (1069), Expect = 7.900e-140
Identity = 203/255 (79.61%), Postives = 235/255 (92.16%), Query Frame = 1
Query:   31 LEKSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAKSLQQLI 795
            +EK+SL++VMKWAE QFH CLMET+ GEYARRYL+E+RG+TE+T+RQF LGFHPD WQWLVNR++ ++ E LL EAKLIF+KEG +R SDYFVNRV+FPV DERKRVVAFGGR+LPG +S  +AKYFNSPES+IFTKSKLLFGLD+ARQ IRETETVVVVEGYTDCITAHQFGVTNVVATLGTALT++HV+YLKRLARKVVLVFDGD AGQ AAER+LTKFI+QEVDLRILTLPA +DPA+FLE+QGA+ L+QLI
Sbjct:  113 VEKTSLFEVMKWAEQQFHHCLMETAEGEYARRYLIEERGYTEDTIRQFRLGFHPDHWQWLVNRAQGKYAEALLSEAKLIFKKEGHNRYSDYFVNRVVFPVRDERKRVVAFGGRVLPGTNSDGIAKYFNSPESLIFTKSKLLFGLDQARQRIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTDTHVSYLKRLARKVVLVFDGDDAGQNAAERSLTKFISQEVDLRILTLPARKDPAEFLEEQGAEKLKQLI 367          
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A0A3D3RGJ9_9PLAN (Toprim domain-containing protein (Fragment) n=1 Tax=Gimesia maris TaxID=122 RepID=A0A3D3RGJ9_9PLAN)

HSP 1 Score: 405 bits (1040), Expect = 3.370e-137
Identity = 200/239 (83.68%), Postives = 222/239 (92.89%), Query Frame = 1
Query:   79 FHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAKSLQQLI 795
            FH+CLM T  GE ARRYLMEDRG+TEET++QF LGFHP+DWQWLVNRSR ++PE LL EA+LIF+KEG SR SDYFVNRVMFPV DERKRVVAFGGRILPG+ +  +AKYFNSPES+IFTKSKLLFGLDE+RQ IRETETVVVVEGYTDCITAHQFGVTN VATLGTALTE+HV+YLKRLARKVVLVFDGDTAGQQAAER+LTKFIAQEVDLRILTLPAG+DPA+FLE+QGA+ L+QLI
Sbjct:    1 FHDCLMNTREGEMARRYLMEDRGYTEETIQQFRLGFHPNDWQWLVNRSRGQYPESLLSEARLIFKKEGHSRYSDYFVNRVMFPVRDERKRVVAFGGRILPGSAAEGIAKYFNSPESIIFTKSKLLFGLDESRQTIRETETVVVVEGYTDCITAHQFGVTNAVATLGTALTETHVSYLKRLARKVVLVFDGDTAGQQAAERSLTKFIAQEVDLRILTLPAGKDPAEFLEEQGAEQLKQLI 239          
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A0A517ZHE6_9PLAN (DNA primase n=3 Tax=Symmachiella TaxID=2795780 RepID=A0A517ZHE6_9PLAN)

HSP 1 Score: 312 bits (800), Expect = 1.610e-99
Identity = 160/261 (61.30%), Postives = 192/261 (73.56%), Query Frame = 1
Query:    1 PRHSQGGQQPLE---KSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGA 774
            PR  Q G Q  +   KS L++V+ WAE QFHECL+ +     AR YL   RGFT + +  + LG+HP+DW+WL+ R+R +F   +L  AKL  +++G     DYFV+RVMFP+ D ++R VAFGGRILPG       KYFNS ES+IFTKS+LL+G D AR  IR+T+TVVVVEGYTDCIT HQ G  NVV TLGTALTE+HVT LKR ARKVVLV+DGD AGQ AAERALTKF+AQEVDLRI+TLPAG DPADFL   GA
Sbjct:  100 PRTHQRGSQSQDGTSKSQLFEVVAWAEQQFHECLLNSPQAATARDYL-NSRGFTADVIAAYRLGYHPNDWEWLIQRARGKFGLDVLTAAKLAAQRDGGRGYYDYFVDRVMFPIRDMQRRPVAFGGRILPGETRENAPKYFNSLESIIFTKSRLLYGFDHARDAIRKTDTVVVVEGYTDCITTHQHGQMNVVGTLGTALTETHVTNLKRFARKVVLVYDGDDAGQNAAERALTKFLAQEVDLRIMTLPAGMDPADFLATHGA 359          
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A0A517ZBS9_9PLAN (DNA primase n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZBS9_9PLAN)

HSP 1 Score: 306 bits (785), Expect = 2.950e-97
Identity = 158/267 (59.18%), Postives = 202/267 (75.66%), Query Frame = 1
Query:    1 PRHSQGGQQPL--EKSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAKSLQQLI 795
            PR ++ G      EK++L + + WA AQFH  L+E    E AR+YL + RG+T ET+R+F LG+HPDDWQWL++R+R +F E+ LL A+LI R E + R  DYF  RV+FP+ +ER + VAFGGRILPGAD  + AKYFNSPES +F KS+L++GL  AR  IR+++T VVVEGYTDCIT HQ G+ NVV TLGTALTE HVT +KR A KVVL++DGD AGQ AAERA+ +F+AQ+VDLRILTLP GQDPAD+L + G  +LQ L+
Sbjct:  100 PRSNRSGPSTTVDEKAALLEALAWACAQFHTALLELPEAEPARQYLRQ-RGYTAETVRKFRLGYHPDDWQWLLHRARGKFTEEQLLTARLIARSE-RGRLYDYFRGRVLFPILNERAQPVAFGGRILPGADGDQ-AKYFNSPESPVFHKSRLVYGLSHARDAIRDSKTAVVVEGYTDCITCHQAGLNNVVGTLGTALTEQHVTTIKRFAPKVVLIYDGDDAGQMAAERAVERFLAQDVDLRILTLPGGQDPADYLGEHGVDALQGLV 363          
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A0A5C5X540_9PLAN (DNA primase n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X540_9PLAN)

HSP 1 Score: 303 bits (775), Expect = 1.010e-95
Identity = 148/257 (57.59%), Postives = 197/257 (76.65%), Query Frame = 1
Query:   22 QQPLEKSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAKSLQQL 792
            Q    ++ L++V++WAE QFH+ LM++   + AR YL + RG T ET+ QF LGFHP++W+WL++RS+ +F  +LLLEA+LI  ++G  R  DYFVNRVMFP+H+ER + V+FGGRILPG++    AKY+N PES +F KS+LLF +D AR  IRE+    +VEGYTDCI  HQFG+ NVV TLGTALT+ HV+ +KR ARKV+LVFDGD AGQ AA RA+ KF+ Q+VDLRILTLP   DPADFLE+QGA++ +++
Sbjct:  109 QHETNRARLFEVLQWAEEQFHQTLMKSPAAQPAREYL-KSRGMTAETVTQFRLGFHPENWEWLIDRSKGKFARELLLEARLIGERDG--RQFDYFVNRVMFPIHNERGQAVSFGGRILPGSNDD--AKYWNGPESAVFHKSRLLFAIDHARDAIRESNEAFIVEGYTDCIACHQFGIANVVGTLGTALTDDHVSAIKRFARKVILVFDGDQAGQAAAIRAVEKFLLQDVDLRILTLPELMDPADFLERQGAQAFREI 360          
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Match: A0A836RL12_9PLAN (DNA primase (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A836RL12_9PLAN)

HSP 1 Score: 289 bits (739), Expect = 8.490e-94
Identity = 140/253 (55.34%), Postives = 184/253 (72.73%), Query Frame = 1
Query:   37 KSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGFTEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSDYFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKLLFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHVTYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPADFLEQQGAKSLQQLI 795
            K+ LY V+ WA  QFH CL+ +   E ARRYL EDRG + ET++ + LG+HP DWQWL+ R+R  +  +LL  A+L+ ++   S   D FV RV+FP+ D R R VAFG R+LPG   A+  KY NSPES++F KS+LLFGLD AR+ I++ +T +VVEGYTDCI A+Q G+ NVV TLGTAL E HV  LKR A +VVLV+DGD AGQ AAER+L +F+A + DLR+LTLP GQDPA+FL  QGA++ ++ +
Sbjct:   74 KTELYQVLAWAARQFHHCLLSSPEAEQARRYLTEDRGLSLETVQAYGLGYHPRDWQWLLERARGVYRPELLFAARLVRQRRDGSGYRDDFVGRVLFPIRDVRGRTVAFGARVLPGDPEAQGPKYLNSPESILFAKSRLLFGLDLAREAIKQAKTAIVVEGYTDCIAAYQAGIRNVVGTLGTALAEHHVLGLKRWAERVVLVYDGDVAGQTAAERSLGRFLAYDTDLRLLTLPDGQDPAEFLVSQGAEAFRERV 326          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89971.20848.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A518ABA0_9PLAN3.100e-16891.73DNA primase n=12 Tax=Gimesia TaxID=1649453 RepID=A... [more]
A0A350K969_9PLAN1.820e-14883.14DNA primase (Fragment) n=1 Tax=Planctomycetaceae b... [more]
A6C4Z6_9PLAN1.320e-14583.14DNA primase n=10 Tax=Planctomycetaceae TaxID=126 R... [more]
A0A518IHJ9_9PLAN4.300e-14281.57DNA primase n=2 Tax=Gimesia TaxID=1649453 RepID=A0... [more]
A0A517WRC7_9PLAN7.900e-14079.61DNA primase n=2 Tax=Gimesia aquarii TaxID=2527964 ... [more]
A0A3D3RGJ9_9PLAN3.370e-13783.68Toprim domain-containing protein (Fragment) n=1 Ta... [more]
A0A517ZHE6_9PLAN1.610e-9961.30DNA primase n=3 Tax=Symmachiella TaxID=2795780 Rep... [more]
A0A517ZBS9_9PLAN2.950e-9759.18DNA primase n=1 Tax=Maioricimonas rarisocia TaxID=... [more]
A0A5C5X540_9PLAN1.010e-9557.59DNA primase n=1 Tax=Thalassoglobus neptunius TaxID... [more]
A0A836RL12_9PLAN8.490e-9455.34DNA primase (Fragment) n=1 Tax=Planctomycetaceae b... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89971contigM-pyrifera_M_contig89971:2..796 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score433.7
Seed ortholog evalue6.1e-119
Seed eggNOG ortholog344747.PM8797T_20723
Preferred namednaG
KEGG koko:K02316
KEGG Pathwayko03030,map03030
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0008150,GO:0016020,GO:0040007,GO:0044464,GO:0071944
EggNOG free text desc.RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication
EggNOG OGs2IXQ4@203682,COG0358@1,COG0358@2
COG Functional cat.L
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03032
Exons1
Model size795
Cds size795
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816810.2676766-CDS-M-pyrifera_M_contig89971:1..7961622816810.2676766-CDS-M-pyrifera_M_contig89971:1..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89971 2..796 +
1692278191.8861344-CDS-M-pyrifera_M_contig89971:1..7961692278191.8861344-CDS-M-pyrifera_M_contig89971:1..796Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89971 2..796 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89971.20848.1prot_M-pyrifera_M_contig89971.20848.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89971 2..796 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89971.20848.1

>prot_M-pyrifera_M_contig89971.20848.1 ID=prot_M-pyrifera_M_contig89971.20848.1|Name=mRNA_M-pyrifera_M_contig89971.20848.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp
PRHSQGGQQPLEKSSLYDVMKWAEAQFHECLMETSVGEYARRYLMEDRGF
TEETMRQFNLGFHPDDWQWLVNRSRNRFPEQLLLEAKLIFRKEGQSRCSD
YFVNRVMFPVHDERKRVVAFGGRILPGADSAKLAKYFNSPESVIFTKSKL
LFGLDEARQGIRETETVVVVEGYTDCITAHQFGVTNVVATLGTALTESHV
TYLKRLARKVVLVFDGDTAGQQAAERALTKFIAQEVDLRILTLPAGQDPA
DFLEQQGAKSLQQLI
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mRNA from alignment at M-pyrifera_M_contig89971:2..796+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89971.20848.1 ID=mRNA_M-pyrifera_M_contig89971.20848.1|Name=mRNA_M-pyrifera_M_contig89971.20848.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=795bp|location=Sequence derived from alignment at M-pyrifera_M_contig89971:2..796+ (Macrocystis pyrifera P11B4 male)
CCCCGTCATTCGCAGGGTGGACAGCAGCCATTAGAGAAGTCGAGTCTGTA TGACGTCATGAAATGGGCGGAAGCACAGTTCCATGAATGTCTGATGGAGA CTTCGGTGGGAGAATATGCCCGCCGTTACCTGATGGAAGACCGGGGCTTT ACCGAAGAGACCATGCGGCAGTTTAATCTCGGTTTTCATCCGGATGACTG GCAATGGCTGGTCAATCGATCACGCAATCGTTTTCCCGAACAGCTGCTGC TGGAAGCAAAACTGATCTTCAGAAAAGAGGGACAGTCACGTTGTTCTGAT TATTTCGTTAATCGGGTGATGTTTCCGGTTCACGACGAGCGAAAGCGGGT TGTTGCATTCGGGGGACGTATCCTGCCCGGAGCCGATTCAGCAAAACTGG CGAAATATTTTAACAGTCCGGAAAGTGTGATTTTCACTAAGAGCAAACTG CTGTTTGGCTTGGATGAAGCGCGACAGGGAATTCGCGAAACGGAGACAGT TGTCGTAGTCGAAGGGTACACTGATTGCATTACAGCGCATCAGTTTGGAG TGACCAATGTCGTAGCCACACTGGGGACGGCTCTGACAGAATCTCATGTG ACTTATCTCAAACGGCTGGCACGTAAAGTCGTACTGGTATTTGATGGTGA TACCGCAGGACAGCAGGCTGCGGAGCGGGCTTTAACGAAATTCATCGCTC AGGAAGTAGATTTACGTATTTTAACGCTGCCGGCAGGCCAGGATCCGGCA GATTTTCTGGAACAGCAGGGGGCAAAGAGTTTGCAGCAGTTGATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89971:2..796+

>mRNA_M-pyrifera_M_contig89971.20848.1 ID=mRNA_M-pyrifera_M_contig89971.20848.1|Name=mRNA_M-pyrifera_M_contig89971.20848.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig89971:2..796+ (Macrocystis pyrifera P11B4 male)
CCCCGTCATTCGCAGGGTGGACAGCAGCCATTAGAGAAGTCGAGTCTGTA
TGACGTCATGAAATGGGCGGAAGCACAGTTCCATGAATGTCTGATGGAGA
CTTCGGTGGGAGAATATGCCCGCCGTTACCTGATGGAAGACCGGGGCTTT
ACCGAAGAGACCATGCGGCAGTTTAATCTCGGTTTTCATCCGGATGACTG
GCAATGGCTGGTCAATCGATCACGCAATCGTTTTCCCGAACAGCTGCTGC
TGGAAGCAAAACTGATCTTCAGAAAAGAGGGACAGTCACGTTGTTCTGAT
TATTTCGTTAATCGGGTGATGTTTCCGGTTCACGACGAGCGAAAGCGGGT
TGTTGCATTCGGGGGACGTATCCTGCCCGGAGCCGATTCAGCAAAACTGG
CGAAATATTTTAACAGTCCGGAAAGTGTGATTTTCACTAAGAGCAAACTG
CTGTTTGGCTTGGATGAAGCGCGACAGGGAATTCGCGAAACGGAGACAGT
TGTCGTAGTCGAAGGGTACACTGATTGCATTACAGCGCATCAGTTTGGAG
TGACCAATGTCGTAGCCACACTGGGGACGGCTCTGACAGAATCTCATGTG
ACTTATCTCAAACGGCTGGCACGTAAAGTCGTACTGGTATTTGATGGTGA
TACCGCAGGACAGCAGGCTGCGGAGCGGGCTTTAACGAAATTCATCGCTC
AGGAAGTAGATTTACGTATTTTAACGCTGCCGGCAGGCCAGGATCCGGCA
GATTTTCTGGAACAGCAGGGGGCAAAGAGTTTGCAGCAGTTGATCCCCCG
TCATTCGCAGGGTGGACAGCAGCCATTAGAGAAGTCGAGTCTGTATGACG
TCATGAAATGGGCGGAAGCACAGTTCCATGAATGTCTGATGGAGACTTCG
GTGGGAGAATATGCCCGCCGTTACCTGATGGAAGACCGGGGCTTTACCGA
AGAGACCATGCGGCAGTTTAATCTCGGTTTTCATCCGGATGACTGGCAAT
GGCTGGTCAATCGATCACGCAATCGTTTTCCCGAACAGCTGCTGCTGGAA
GCAAAACTGATCTTCAGAAAAGAGGGACAGTCACGTTGTTCTGATTATTT
CGTTAATCGGGTGATGTTTCCGGTTCACGACGAGCGAAAGCGGGTTGTTG
CATTCGGGGGACGTATCCTGCCCGGAGCCGATTCAGCAAAACTGGCGAAA
TATTTTAACAGTCCGGAAAGTGTGATTTTCACTAAGAGCAAACTGCTGTT
TGGCTTGGATGAAGCGCGACAGGGAATTCGCGAAACGGAGACAGTTGTCG
TAGTCGAAGGGTACACTGATTGCATTACAGCGCATCAGTTTGGAGTGACC
AATGTCGTAGCCACACTGGGGACGGCTCTGACAGAATCTCATGTGACTTA
TCTCAAACGGCTGGCACGTAAAGTCGTACTGGTATTTGATGGTGATACCG
CAGGACAGCAGGCTGCGGAGCGGGCTTTAACGAAATTCATCGCTCAGGAA
GTAGATTTACGTATTTTAACGCTGCCGGCAGGCCAGGATCCGGCAGATTT
TCTGGAACAGCAGGGGGCAAAGAGTTTGCAGCAGTTGATC
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