prot_M-pyrifera_M_contig8994.20844.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8994.20844.1
Unique Nameprot_M-pyrifera_M_contig8994.20844.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length582
Homology
BLAST of mRNA_M-pyrifera_M_contig8994.20844.1 vs. uniprot
Match: D7FM48_ECTSI (USP domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM48_ECTSI)

HSP 1 Score: 258 bits (660), Expect = 6.220e-75
Identity = 240/616 (38.96%), Postives = 276/616 (44.81%), Query Frame = 0
Query:    1 FEVKYHPAASGGSCGGTSARKKSRLSLNRRRRPLPMNPHGCSXXXXXXXXXXXXXRR-QSPYLSSAATPSPGG-----------------DRLAAREDSADALAGDALGSMPPPRXXXXXXXXXXFVGLENLGETCYVNAVVQALVACLEALMLD--GMGASARVRRENSRGTPCSVPCVGGEGISVEASAAGDERGGGGDAAGSMHG-DGNHVLETLGNLLEGAKERNQALSTLASGGDGLTQLVARQAFTAPSSSEDVATHSETFRPVVVERGSETAAMLETRRLCEP---PPRAPDFPRNVDPCAKAINPIALVDLIREGWLSAGR---GSGGARSVHEGHRGRLAGRSSSAGFGSGQQCASELLGKLLDLPAVAGGVPGRGEAATCRGR--GRSVSDSTSGLIDAFRGVLSNRTACVECERDRTTHEDFTELTLPPLLP--QHPPPSPKRVAEMAPASAAANDHSLS---ERLTLKGLVDAVLGSETLDGNSKKLGDSEDVRYELVGIILHKGQTLGSGHYTFALHTGA-TSCSAGESSTQCPQHCSSALGVGAEGVAGIGVGCSTNKHTFALFDDECVRWLSLKEECNVFRGGGPSGGLGEAFLVFYVRRP 581
            F  + HP   G S G    RK+SRL L +RRR LP                     R +SP+ SSAA   P                   DR      +A  +   + G  PP            FVGL+NLGETCYVNAV+QAL AC   L     G G    V  E S G+ CS P         +A+ AG    G       + G   N VL  L  +L   + RN+ALS          QLVA  + TA SS            P   E     A      + C+P    P  P          +AI P  LV+LIR GWLSA R   G GGA            G + S  FG+GQ C SELLGK L L    GG  G        GR  G S S S   L  AFRG L  RT CVECERDRT  EDFTELTLPPLLP  QH PP    +       AA ND   S    R T++ LVD V   E+L GN+K L DS DV Y+L+G+ILH+GQTL SGHYTFALH  A  S S  E                         G +  K  FALFDD  V WLS +EE  V RGGG  G  G+ FLVFY RRP
Sbjct:   25 FGAENHPPV-GSSSGVNRLRKRSRLCLGKRRRALPAQHAAVGQPSIGTAGSPSFQERFRSPFTSSAALAPPAEAIGYPWGASPGLSETCLDRAGVLAPAAWTIERPSSGPSPP------------FVGLKNLGETCYVNAVLQALTACHGVLTSSRGGGGGWHDVGSEGSEGS-CSTPPA------ADAAPAGAASEGTAVLVAGVTGTQRNPVLAALEQVLGEMETRNRALSQ--------QQLVAFGSQTAVSS------------PAEPESTGSGATSSPESKTCQPYDQTPLRPSASTGEGVLVEAIAPTFLVELIRGGWLSADRSRLGGGGA------------GATGSTEFGTGQACVSELLGKFLGLVVDDGG-SGATSLGGVGGRRSGGSHSSSFCCLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLPPPQHAPP----LTAQGAIPAAENDGGPSLRGRRRTMQTLVDGVFEGESLAGNNK-LCDSGDVFYDLIGVILHQGQTLASGHYTFALHAAAGDSASFLEXXXXXXXXXXXXXXXXXXXXXXXXXGSTCGKPGFALFDDATVGWLSPEEERAVLRGGG--GVFGDPFLVFYARRP 580          
BLAST of mRNA_M-pyrifera_M_contig8994.20844.1 vs. uniprot
Match: A0A6H5L2L7_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2L7_9PHAE)

HSP 1 Score: 159 bits (401), Expect = 1.760e-38
Identity = 165/520 (31.73%), Postives = 201/520 (38.65%), Query Frame = 0
Query:  191 NHVLETLGNLLEGAKERNQALSTLASGGDGLTQLVARQAFTAPSSSEDVATHSETFRPVVVERGSETAAMLETRRLCEPPPRAPDFPRNVDPCAKAINPIALVDLIREGWLSAGR---GSGGARSVHEGHRGRLAGRSSSAGFGSGQQCASELLGKLLDLPAVAGGVPGRGEAATCRGR-GRSVSDSTSGLIDAFRGVLSNRTACVECERDRTTHEDFTELTLPPLLP-QHPPPSPKRVAEMAPASAAANDHSLSER---LTLKGLVDAVLGSETLDGNSK---------------------------------------------------------------------------------------------------------------------KLGDSEDVRYELVGIILHKGQTLGSGHYTFALHTGA---TSCSAGESSTQCPQHCSSALGVGAEGVAGIGVGCST-NKHTFALFDDECVRWLSLKEECNVFRGGGPSGGLGEAFLVFYVRRP 581
            N VL  L  +L   + RN+AL           QLVA  + TA S   +         P     G+ ++A  +T +  +  P  P          ++I P +LV+LI  GWLSA R   G GGA            G + S  FG+GQ C SELLGK L L                  R G + S S  GL  AFRG L  RT CVECERDRT  EDFTELTLPPLLP QH PP    +       AA ND   S R    T++ L+D V   E+L GN+K                                                                                                                     +L DS D+ Y+L+G ILH+GQTL SGHYTFA++  A    S  A +              +  +G  G     ST  K  FALFDD  VRWLSL+EE  V RG G  GG G+ FLVFY RRP
Sbjct:   56 NPVLVALEQVLGEMETRNRALFQ--------QQLVAAGSQTAVSPPAE---------PESTSSGATSSAESKTCQWFDQTPLRPSASTGEGVRVESIAPTSLVELIHGGWLSADRARLGGGGA------------GTTGSTDFGTGQACVSELLGKFLGLVVDDXXXXXXXXXXXXXXRSGGTHSSSFCGLAQAFRGTLCARTLCVECERDRTAREDFTELTLPPLLPPQHAPP----LTAQRAIPAAENDGGPSLRGRHRTIQTLIDGVFERESLAGNNKVWCEACRQWTEAERRSSVHSPPGLLALHVRPGTRKRSSPCLYPKALARASGGAPDSVVGDVRRGADGRLPAGSREEAIERTLVVRKAARCQFHGGGVNSXXXXXXXXXXXSVDSCTGQLCDSGDIFYDLIGAILHQGQTLASGHYTFAINAAAGDWASFLAQQXXXXXXXADRDNRALVQQGPPGATAAGSTYGKPDFALFDDATVRWLSLEEERAVLRGDG--GGFGDPFLVFYARRP 540          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8994.20844.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FM48_ECTSI6.220e-7538.96USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A6H5L2L7_9PHAE1.760e-3831.73USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 103..151
e-value: 2.1E-6
score: 28.8
NoneNo IPR availablePANTHERPTHR24006FAMILY NOT NAMEDcoord: 60..578
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00973USP_2coord: 473..491
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 109..580
score: 11.049
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 104..580

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8994contigM-pyrifera_M_contig8994:2561..4882 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8994.20844.1mRNA_M-pyrifera_M_contig8994.20844.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8994 2561..4882 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8994.20844.1 ID=prot_M-pyrifera_M_contig8994.20844.1|Name=mRNA_M-pyrifera_M_contig8994.20844.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=582bp
FEVKYHPAASGGSCGGTSARKKSRLSLNRRRRPLPMNPHGCSSSSSSSSN
SNSSSRRQSPYLSSAATPSPGGDRLAAREDSADALAGDALGSMPPPRSLP
PPPPPPPFVGLENLGETCYVNAVVQALVACLEALMLDGMGASARVRRENS
RGTPCSVPCVGGEGISVEASAAGDERGGGGDAAGSMHGDGNHVLETLGNL
LEGAKERNQALSTLASGGDGLTQLVARQAFTAPSSSEDVATHSETFRPVV
VERGSETAAMLETRRLCEPPPRAPDFPRNVDPCAKAINPIALVDLIREGW
LSAGRGSGGARSVHEGHRGRLAGRSSSAGFGSGQQCASELLGKLLDLPAV
AGGVPGRGEAATCRGRGRSVSDSTSGLIDAFRGVLSNRTACVECERDRTT
HEDFTELTLPPLLPQHPPPSPKRVAEMAPASAAANDHSLSERLTLKGLVD
AVLGSETLDGNSKKLGDSEDVRYELVGIILHKGQTLGSGHYTFALHTGAT
SCSAGESSTQCPQHCSSALGVGAEGVAGIGVGCSTNKHTFALFDDECVRW
LSLKEECNVFRGGGPSGGLGEAFLVFYVRRP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf