mRNA_M-pyrifera_M_contig8991.20840.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: D8LN69_ECTSI (Putative gamma-glutamylcyclotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LN69_ECTSI) HSP 1 Score: 162 bits (411), Expect = 2.350e-48 Identity = 80/109 (73.39%), Postives = 95/109 (87.16%), Query Frame = 1
Query: 109 AAGGGKGTPLFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKIDGLEEAT-TATAYVW 432
A G + TPLFVYGTLMN+KVLFALL+RVP T+KA LSGYHR++I+DHVFPAIRP+EG SV GL M GLDARE+LIFDLFED+DYHKVDV+VK++ ++AT TAT YVW
Sbjct: 20 ADGPREDTPLFVYGTLMNEKVLFALLERVPSTRKASLSGYHRFRIKDHVFPAIRPREGGSVEGLLMTGLDAREKLIFDLFEDEDYHKVDVQVKVEACKDATQTATCYVW 128
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: A0A836CNX4_9STRA (Putative gamma-glutamylcyclotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNX4_9STRA) HSP 1 Score: 97.4 bits (241), Expect = 1.110e-22 Identity = 53/100 (53.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 136 LFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKI-DGLEEATTATAYVW 432
+FVYGTLM +V+ LL +P ++KA L G+HRY+I+D V+PAIRPKE SV+G+ + + ER IFDLFED DY K V V + DG A T +AYVW
Sbjct: 13 VFVYGTLMESRVVTTLLGHMPSSEKAVLPGFHRYRIKDRVYPAIRPKEDGSVSGIVFDVTEREER-IFDLFEDSDYDKETVTVTLEDG--SAVTCSAYVW 109
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: UPI000CCCF1F1 (AIG2-like protein D isoform X3 n=2 Tax=Populus trichocarpa TaxID=3694 RepID=UPI000CCCF1F1) HSP 1 Score: 89.0 bits (219), Expect = 1.300e-19 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 1
Query: 109 AAGGGKGTPLFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKIDGLEEATTATAYVW 432
AAGG + +FVYG+L+ D V+ ALL R+P + A L+GYHR+ I+ V+PAI P E V+G + G+ E I D +ED +Y +V V+V + T A AYVW
Sbjct: 6 AAGGNQVHNVFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPVENKKVSGKVLHGITDPELYILDEYEDVEYERVTVDVSLMDNSNKTQALAYVW 113
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: U5GCL0_POPTR (Putative gamma-glutamylcyclotransferase n=2 Tax=Populus trichocarpa TaxID=3694 RepID=U5GCL0_POPTR) HSP 1 Score: 89.0 bits (219), Expect = 1.730e-19 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 1
Query: 109 AAGGGKGTPLFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKIDGLEEATTATAYVW 432
AAGG + +FVYG+L+ D V+ ALL R+P + A L+GYHR+ I+ V+PAI P E V+G + G+ E I D +ED +Y +V V+V + T A AYVW
Sbjct: 6 AAGGNQVHNVFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPVENKKVSGKVLHGITDPELYILDEYEDVEYERVTVDVSLMDNSNKTQALAYVW 113
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: UPI000D188CA7 (AIG2-like protein D isoform X1 n=1 Tax=Populus trichocarpa TaxID=3694 RepID=UPI000D188CA7) HSP 1 Score: 89.0 bits (219), Expect = 3.870e-19 Identity = 47/108 (43.52%), Postives = 66/108 (61.11%), Query Frame = 1
Query: 109 AAGGGKGTPLFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKIDGLEEATTATAYVW 432
AAGG + +FVYG+L+ D V+ ALL R+P + A L+GYHR+ I+ V+PAI P E V+G + G+ E I D +ED +Y +V V+V + T A AYVW
Sbjct: 6 AAGGNQVHNVFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPVENKKVSGKVLHGITDPELYILDEYEDVEYERVTVDVSLMDNSNKTQALAYVW 113
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: A0A1E5W809_9POAL (Putative gamma-glutamylcyclotransferase n=2 Tax=Paniceae TaxID=147428 RepID=A0A1E5W809_9POAL) HSP 1 Score: 87.4 bits (215), Expect = 8.250e-19 Identity = 42/99 (42.42%), Postives = 60/99 (60.61%), Query Frame = 1
Query: 136 LFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKIDGLEEATTATAYVW 432
+FVYG+LM D+V+ A+L RVPP A L YHR+ ++ ++PAI P E VAG+ + G+ E L+ D FED +Y + VE+ + E A YVW
Sbjct: 19 VFVYGSLMADEVVRAILKRVPPAAPAILPNYHRFNVKGRIYPAILPVESKKVAGMVVMGITDEELLVLDAFEDVEYTRTRVEISLTDSSEKMLADTYVW 117
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: UPI001F5C8B64 (AIG2-like protein D n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5C8B64) HSP 1 Score: 86.7 bits (213), Expect = 1.560e-18 Identity = 44/108 (40.74%), Postives = 65/108 (60.19%), Query Frame = 1
Query: 109 AAGGGKGTPLFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKIDGLEEATTATAYVW 432
AAGG +FVYG+LM D+V+ A+L RVP + A L+ YHR+ ++D ++PAI P E VAG + G+ E ++ D FED +Y + V++ + E A YVW
Sbjct: 10 AAGGAHS--VFVYGSLMADEVVSAILHRVPASSPALLNDYHRFSVKDRIYPAILPVESKKVAGRVITGISDAELIVLDAFEDYEYVRRTVQISLTDTSETMLADTYVW 115
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: UPI0009E3A29B (AIG2-like protein D n=1 Tax=Phalaenopsis equestris TaxID=78828 RepID=UPI0009E3A29B) HSP 1 Score: 86.3 bits (212), Expect = 1.710e-18 Identity = 43/99 (43.43%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 136 LFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKIDGLEEATTATAYVW 432
+FVYG+L+ D+V+ LL RVPP A L+GYHRY ++ V+PAI P E V G + G+ E + D FED++Y + VEV ++G +A YVW
Sbjct: 18 VFVYGSLLADEVVSKLLSRVPPCTPAILNGYHRYNVKGRVYPAILPAERKKVIGRVIMGVTKAELCVLDTFEDEEYKRSTVEVFLNGDSGKLSAETYVW 116
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: I3SSR9_MEDTR (Putative gamma-glutamylcyclotransferase n=2 Tax=Medicago truncatula TaxID=3880 RepID=I3SSR9_MEDTR) HSP 1 Score: 86.7 bits (213), Expect = 3.730e-18 Identity = 47/99 (47.47%), Postives = 61/99 (61.62%), Query Frame = 1
Query: 136 LFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKIDGLEEATTATAYVW 432
+FVYG+L+ D+V+ ALL RVPP+ A LS YHR++I+D V+PAI P V G + G+ E I D FED +Y K DVEV + E AYVW
Sbjct: 28 VFVYGSLLADEVVCALLKRVPPSSPATLSDYHRFKIKDRVYPAILPVHTKKVTGRVLLGISGVELDILDEFEDVEYTKTDVEVFLMDNSENLRVYAYVW 126
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Match: A0A4U5QBH5_POPAL (Putative gamma-glutamylcyclotransferase n=2 Tax=Populus alba TaxID=43335 RepID=A0A4U5QBH5_POPAL) HSP 1 Score: 85.1 bits (209), Expect = 4.350e-18 Identity = 46/107 (42.99%), Postives = 64/107 (59.81%), Query Frame = 1
Query: 112 AGGGKGTPLFVYGTLMNDKVLFALLDRVPPTQKARLSGYHRYQIRDHVFPAIRPKEGDSVAGLFMEGLDARERLIFDLFEDDDYHKVDVEVKIDGLEEATTATAYVW 432
A G + +FVYG+L+ D V+ ALL R+P + A L+GYHR+ I+ V+PAI P E V+G + G+ E I D FED +Y +V V+V + T A AYVW
Sbjct: 24 AAGNQVHNVFVYGSLLADDVVRALLSRIPQSSPAILNGYHRFSIKGRVYPAILPAENKKVSGKVLHGITDPELYILDEFEDVEYERVTVDVFFMDNSKKTQALAYVW 130 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8991.20840.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8991.20840.1 >prot_M-pyrifera_M_contig8991.20840.1 ID=prot_M-pyrifera_M_contig8991.20840.1|Name=mRNA_M-pyrifera_M_contig8991.20840.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=145bp MEGEERGAATAAAPAAAVAGATAAAAAAAEVGVGGDAAGGGKGTPLFVYGback to top mRNA from alignment at M-pyrifera_M_contig8991:212..2414- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8991.20840.1 ID=mRNA_M-pyrifera_M_contig8991.20840.1|Name=mRNA_M-pyrifera_M_contig8991.20840.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2203bp|location=Sequence derived from alignment at M-pyrifera_M_contig8991:212..2414- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8991:212..2414- >mRNA_M-pyrifera_M_contig8991.20840.1 ID=mRNA_M-pyrifera_M_contig8991.20840.1|Name=mRNA_M-pyrifera_M_contig8991.20840.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=870bp|location=Sequence derived from alignment at M-pyrifera_M_contig8991:212..2414- (Macrocystis pyrifera P11B4 male)back to top |