mRNA_M-pyrifera_M_contig89898.20836.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig89898.20836.1
Unique NamemRNA_M-pyrifera_M_contig89898.20836.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: A0A6I6A605_9PLAN (Asparagine synthase (Glutamine-hydrolyzing) n=9 Tax=Gimesia TaxID=1649453 RepID=A0A6I6A605_9PLAN)

HSP 1 Score: 488 bits (1256), Expect = 4.640e-168
Identity = 239/242 (98.76%), Postives = 241/242 (99.59%), Query Frame = 1
Query:    1 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIPDHFPEAALV 726
            QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYT EFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVL+YLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPL+LKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIPDHFPEAALV
Sbjct:  429 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTTEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLSYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLELKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIPDHFPEAALV 670          
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: A0A518ICX2_9PLAN (Asparagine synthetase [glutamine-hydrolyzing] 1 n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518ICX2_9PLAN)

HSP 1 Score: 444 bits (1143), Expect = 5.600e-151
Identity = 216/242 (89.26%), Postives = 226/242 (93.39%), Query Frame = 1
Query:    1 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIPDHFPEAALV 726
            QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERR EMY PEFREQ+  FDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAA MPL+LKMHKGRGKQIL DTF+DLLPESIQTRKKMGFGVPLNHWFR+ELKPLL+DVL+ QRA DRQIF+  AVEQLI+EH   QWDHSARLWSLLVLEMWF+TF+DPASIPDHFPE  L 
Sbjct:  429 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRHEMYAPEFREQLNTFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAAMPLNLKMHKGRGKQILTDTFSDLLPESIQTRKKMGFGVPLNHWFRNELKPLLFDVLMSQRARDRQIFNPAAVEQLISEHLKLQWDHSARLWSLLVLEMWFQTFLDPASIPDHFPETVLT 670          
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: A0A517V7Q8_9PLAN (Asparagine synthetase [glutamine-hydrolyzing] 1 n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A517V7Q8_9PLAN)

HSP 1 Score: 442 bits (1138), Expect = 3.190e-150
Identity = 213/242 (88.02%), Postives = 227/242 (93.80%), Query Frame = 1
Query:    1 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIPDHFPEAALV 726
            QKLPASVEQKSFRRRVKRFLAGL+VPPERRYLKWVGIFDTERR EMY P FREQ+ +FDADQFLLDAYQLCPDRDFVTRTTATDV TYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAA MPL  KMHKGRGKQIL DTF+DLLPESIQTRKKMGFGVPLNHWFR+ELKPLL+DVLLDQRA+DRQIFD +AVEQLI+EH N QWDHSARLWSLLVLE+WF+TF+DP SIPDHFP+  L+
Sbjct:  429 QKLPASVEQKSFRRRVKRFLAGLSVPPERRYLKWVGIFDTERRHEMYAPGFREQLADFDADQFLLDAYQLCPDRDFVTRTTATDVQTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAAMPLKYKMHKGRGKQILTDTFSDLLPESIQTRKKMGFGVPLNHWFRNELKPLLFDVLLDQRALDRQIFDPQAVEQLISEHLNLQWDHSARLWSLLVLELWFQTFLDPVSIPDHFPDPVLI 670          
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: A0A517VX52_9PLAN (Asparagine synthetase [glutamine-hydrolyzing] 1 n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VX52_9PLAN)

HSP 1 Score: 423 bits (1088), Expect = 1.120e-142
Identity = 207/242 (85.54%), Postives = 219/242 (90.50%), Query Frame = 1
Query:    1 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIPDHFPEAALV 726
            Q+LPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERR EMY+P FR Q+  FD DQFLL AYQLC DRDFVTRTTATDVL+YLPCDILTKVDIASMAHSLECRSPFLDHHVAELAA MPL+LKM KGRGK+IL DTF+DLLPESIQTRKKMGFGVPLN WFR+ELKPLL+DVLLDQRA DRQIF+   VEQLINEH   QWDHSARLWSLLVLEMWF+TF+DP SIPDHFPE  L 
Sbjct:  429 QRLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRFEMYSPAFRAQLGTFDTDQFLLKAYQLCCDRDFVTRTTATDVLSYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAAMPLELKMEKGRGKKILTDTFSDLLPESIQTRKKMGFGVPLNEWFRNELKPLLFDVLLDQRAKDRQIFNPLKVEQLINEHLTLQWDHSARLWSLLVLEMWFQTFIDPVSIPDHFPETVLT 670          
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: A0A3B1DSP5_9ZZZZ (Asparagine synthetase [glutamine-hydrolyzing] n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1DSP5_9ZZZZ)

HSP 1 Score: 331 bits (849), Expect = 9.020e-107
Identity = 156/228 (68.42%), Postives = 189/228 (82.89%), Query Frame = 1
Query:    1 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMD 684
            QK+PASV QKSFRRR+KRFL GL+  PERRY KWVGIFD ERR E+Y+ EF+EQ+  FD+     +AY+ CP RDFVTRTT TD+LTYLPCDILTKVDIASMA+SLECRSPFLDHHV ELAA MP+ LK+   +GKQIL+DTF+DLLP SIQTR KMGFGVPL+HWFR+ELKPLLYD +L +RA+ R  F  K +++L++EH  ++WDHS RLWSLL+ EMW +T++D
Sbjct:  432 QKIPASVNQKSFRRRLKRFLQGLSESPERRYHKWVGIFDAERRDELYSDEFKEQLDGFDSLDLFHEAYKACPGRDFVTRTTCTDLLTYLPCDILTKVDIASMAYSLECRSPFLDHHVVELAAKMPMSLKLKGKQGKQILIDTFSDLLPASIQTRPKMGFGVPLDHWFRNELKPLLYDTVLSERALQRGYFKPKVIQKLVDEHMQKKWDHSYRLWSLLIFEMWQQTYLD 659          
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: A0A3L7QNS3_9BACT (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7QNS3_9BACT)

HSP 1 Score: 329 bits (844), Expect = 4.120e-106
Identity = 157/233 (67.38%), Postives = 192/233 (82.40%), Query Frame = 1
Query:    1 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIP 699
            QK+PA VEQKSFRRR+KRFL+G+A  PERRYL+W+GIFD + R  +Y+ EF+ +I  FD+ +FLLDAYQLCPDRDF+TRTTA DV TYLPCDILTKVDIASMA SLE RSPFLDHHVAELAA MPLDLK  +GRGK+ILV+TF DLLP SIQTRKKMGFGVP++HWFR+EL+ L+ + LL  +++ R  F+   +  L+ +H + Q+DHS RLW+L+VLE W RTF+DPAS P
Sbjct:  420 QKIPARVEQKSFRRRLKRFLSGMAESPERRYLRWIGIFDNDARDRLYSTEFKARIAGFDSAEFLLDAYQLCPDRDFITRTTAVDVQTYLPCDILTKVDIASMAASLEARSPFLDHHVAELAARMPLDLKFERGRGKKILVETFKDLLPSSIQTRKKMGFGVPIDHWFRNELRSLMEETLLSPQSLARGYFNPDTIRDLVTQHTSGQFDHSYRLWNLMVLEHWHRTFLDPASPP 652          
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: A0A3L7NRI2_9BACT (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7NRI2_9BACT)

HSP 1 Score: 327 bits (839), Expect = 2.250e-105
Identity = 154/233 (66.09%), Postives = 194/233 (83.26%), Query Frame = 1
Query:    1 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIP 699
            QK+PA VEQKSFRRR+KRFL+GL+  PERRYL+W+GIFDT+ R  +YTP FR+Q+ N+D+ +FLL+AYQLCPDRDF+TRTTA DVLTYLPCDILTKVDIASMA SLE RSPFLDHHV ELAA MP++LK   G GK+IL++TF DLLP SIQTRKKMGFGVP++HWFR EL+ L+ + LL  R++ R  F+ + + ++I++H + Q+DH+ RLW+L+ LE W RTF+DPAS P
Sbjct:  420 QKIPARVEQKSFRRRLKRFLSGLSQSPERRYLRWIGIFDTDARERLYTPSFRDQLNNYDSAEFLLNAYQLCPDRDFITRTTAADVLTYLPCDILTKVDIASMAASLEARSPFLDHHVVELAARMPIELKFEPGLGKKILIETFRDLLPPSIQTRKKMGFGVPIDHWFRGELRSLVEESLLSPRSLARGYFNPQVIREMIDQHVSGQFDHAYRLWNLICLEHWHRTFIDPASPP 652          
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: UPI00141F82BD (asparagine synthase (glutamine-hydrolyzing) n=1 Tax=Rubinisphaera sp. JC658 TaxID=2713176 RepID=UPI00141F82BD)

HSP 1 Score: 318 bits (815), Expect = 6.600e-102
Identity = 156/243 (64.20%), Postives = 188/243 (77.37%), Query Frame = 1
Query:    1 QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMD---PASIPDHFPEAA 720
            Q++PAS +QKSFRRR+KR LAGL +PPE RYL WVGIFD++RR  +Y+ EFR  +Q+  ++ FLL +Y+LCP RD VTR TA DVLTYLPCDILTKVDIASMA  LECRSPFLDHHV ELAA MPL+ KM  GRGK+IL +TF DL+PE IQ R KMGFGVPL+ WFR EL+PLL DVLL QRA+DR +F   AV +L+ EH + QWDHSARLW+L+ LE W R ++D   PA  P  F  ++
Sbjct:  406 QQVPASSKQKSFRRRLKRLLAGLRLPPELRYLNWVGIFDSQRRQSLYSDEFRTMLQDVHSENFLLSSYELCPSRDIVTRATAADVLTYLPCDILTKVDIASMAVGLECRSPFLDHHVVELAARMPLEWKMSGGRGKRILTETFDDLIPEPIQNRAKMGFGVPLDSWFRDELRPLLDDVLLSQRALDRGLFRPDAVRELVREHVSGQWDHSARLWALICLEGWQRVYLDQPSPAECPTEFSSSS 648          
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: A0A2E7RTI5_9PLAN (Asparagine synthase (Glutamine-hydrolyzing) n=2 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7RTI5_9PLAN)

HSP 1 Score: 312 bits (799), Expect = 1.300e-99
Identity = 155/239 (64.85%), Postives = 184/239 (76.99%), Query Frame = 1
Query:    7 LPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIPDHFPEAAL 723
            LPAS  QKS  RR +RF   L   PERRYLKWVGIFD  RR +++T +FRE++   DA  FLLDAY  CPDRDFVTRTT +DVLTYLPCDILTKVDIASMA+SLECRSP LDHHV ELAA MP+ LK    RGK ILV+TF+DLLPE I++R KMGFGVPL+HWFR+EL+PLL DVLLD  AI R  F  +A+ QL++EH + +WDHS RLW LL LE+W R ++D A++P   P A+L
Sbjct:  403 LPASTRQKSLLRRARRFADALGEAPERRYLKWVGIFDANRRNDLWTDQFRERLGEHDAAGFLLDAYAECPDRDFVTRTTCSDVLTYLPCDILTKVDIASMAYSLECRSPLLDHHVVELAARMPMSLKRQGSRGKTILVETFSDLLPEKIRSRPKMGFGVPLDHWFRNELRPLLEDVLLDPVAISRGHFRPEAIRQLVDEHVSNRWDHSYRLWCLLCLEVWHRIYLD-ATVPPASPPASL 640          
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Match: A0A2E8FDM6_9PLAN (Asparagine synthase (Glutamine-hydrolyzing) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E8FDM6_9PLAN)

HSP 1 Score: 308 bits (788), Expect = 5.710e-98
Identity = 148/235 (62.98%), Postives = 176/235 (74.89%), Query Frame = 1
Query:    7 LPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPEFREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIASMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPESIQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLINEHQNQQWDHSARLWSLLVLEMWFRTFMDPASIPDHFP 711
            LPAS  QKS  RR+KRF   +   P+RRYL+WVGIFD +RR  M+T  F E++   DA +FLL+ Y  CPDRDFVT+TT  DVL+YLPCDILTKVD+ASMA SLECRSP LDHHV ELAA MP+ LK    RGK ILVDTFADLLP  I++R KMGFGVPL+HWFR+ELKPLLYD+LLD  A+ R  F    + QL++EH   +WDHS RLWSL+ LE W RT++DPA+ P   P
Sbjct:  403 LPASTRQKSLLRRLKRFADAIGKTPQRRYLEWVGIFDRQRRRSMWTDGFLERLAGSDAAEFLLETYLECPDRDFVTQTTCADVLSYLPCDILTKVDVASMASSLECRSPLLDHHVVELAARMPIALKRQGSRGKTILVDTFADLLPRQIRSRPKMGFGVPLDHWFRNELKPLLYDILLDDTAVARGYFQPDVIRQLVSEHVENRWDHSYRLWSLVCLEAWHRTYLDPATPPTSAP 637          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89898.20836.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6I6A605_9PLAN4.640e-16898.76Asparagine synthase (Glutamine-hydrolyzing) n=9 Ta... [more]
A0A518ICX2_9PLAN5.600e-15189.26Asparagine synthetase [glutamine-hydrolyzing] 1 n=... [more]
A0A517V7Q8_9PLAN3.190e-15088.02Asparagine synthetase [glutamine-hydrolyzing] 1 n=... [more]
A0A517VX52_9PLAN1.120e-14285.54Asparagine synthetase [glutamine-hydrolyzing] 1 n=... [more]
A0A3B1DSP5_9ZZZZ9.020e-10768.42Asparagine synthetase [glutamine-hydrolyzing] n=1 ... [more]
A0A3L7QNS3_9BACT4.120e-10667.38Asparagine synthase (Glutamine-hydrolyzing) n=1 Ta... [more]
A0A3L7NRI2_9BACT2.250e-10566.09Asparagine synthase (Glutamine-hydrolyzing) n=1 Ta... [more]
UPI00141F82BD6.600e-10264.20asparagine synthase (glutamine-hydrolyzing) n=1 Ta... [more]
A0A2E7RTI5_9PLAN1.300e-9964.85Asparagine synthase (Glutamine-hydrolyzing) n=2 Ta... [more]
A0A2E8FDM6_9PLAN5.710e-9862.98Asparagine synthase (Glutamine-hydrolyzing) n=1 Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89898contigM-pyrifera_M_contig89898:2..730 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score448.7
Seed ortholog evalue1.7e-123
Seed eggNOG ortholog344747.PM8797T_29887
KEGG rclassRC00010
KEGG koko:K01953
KEGG ReactionR00578
KEGG Pathwayko00250,ko01100,ko01110,map00250,map01100,map01110
Hectar predicted targeting categorymitochondrion
EggNOG free text desc.Asparagine synthase, glutamine-hydrolyzing
EggNOG OGs2IXAI@203682,COG0367@1,COG0367@2
EC6.3.5.4
COG Functional cat.E
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01002
Exons1
Model size729
Cds size729
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816809.6724424-CDS-M-pyrifera_M_contig89898:1..7301622816809.6724424-CDS-M-pyrifera_M_contig89898:1..730Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89898 2..730 +
1692278191.5070133-CDS-M-pyrifera_M_contig89898:1..7301692278191.5070133-CDS-M-pyrifera_M_contig89898:1..730Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig89898 2..730 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89898.20836.1prot_M-pyrifera_M_contig89898.20836.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig89898 2..730 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig89898.20836.1

>prot_M-pyrifera_M_contig89898.20836.1 ID=prot_M-pyrifera_M_contig89898.20836.1|Name=mRNA_M-pyrifera_M_contig89898.20836.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=243bp
QKLPASVEQKSFRRRVKRFLAGLAVPPERRYLKWVGIFDTERRLEMYTPE
FREQIQNFDADQFLLDAYQLCPDRDFVTRTTATDVLTYLPCDILTKVDIA
SMAHSLECRSPFLDHHVAELAAVMPLDLKMHKGRGKQILVDTFADLLPES
IQTRKKMGFGVPLNHWFRHELKPLLYDVLLDQRAIDRQIFDRKAVEQLIN
EHQNQQWDHSARLWSLLVLEMWFRTFMDPASIPDHFPEAALV*
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mRNA from alignment at M-pyrifera_M_contig89898:2..730+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig89898.20836.1 ID=mRNA_M-pyrifera_M_contig89898.20836.1|Name=mRNA_M-pyrifera_M_contig89898.20836.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=729bp|location=Sequence derived from alignment at M-pyrifera_M_contig89898:2..730+ (Macrocystis pyrifera P11B4 male)
CAGAAACTCCCCGCATCTGTGGAACAGAAATCATTTCGCCGCCGAGTCAA GCGATTCCTGGCAGGACTCGCGGTTCCTCCGGAACGTCGCTACCTCAAAT GGGTCGGCATCTTTGATACAGAACGCCGACTGGAGATGTATACTCCCGAA TTCAGAGAGCAGATCCAGAACTTCGATGCCGACCAGTTCCTGCTTGACGC TTACCAGCTCTGTCCTGACCGCGACTTTGTGACCCGCACGACTGCGACTG ATGTGCTGACTTATCTCCCCTGTGACATTCTGACCAAGGTAGACATTGCC AGCATGGCGCACAGTCTGGAATGTCGCAGCCCGTTCCTGGATCATCATGT GGCGGAACTGGCTGCAGTTATGCCCCTGGATCTAAAAATGCACAAAGGCC GCGGCAAACAGATTCTCGTCGACACCTTTGCTGATCTCCTTCCCGAATCG ATCCAGACACGCAAGAAAATGGGATTCGGTGTGCCCCTCAATCACTGGTT CCGTCATGAATTGAAACCATTACTCTACGATGTTCTGCTTGACCAGCGGG CCATCGATCGTCAGATCTTTGACCGAAAGGCTGTAGAACAGCTGATCAAC GAACACCAGAATCAGCAATGGGATCACAGCGCCCGTCTCTGGTCACTGCT GGTTCTGGAAATGTGGTTTCGAACCTTTATGGATCCTGCAAGCATTCCCG ATCACTTTCCGGAAGCTGCACTGGTATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig89898:2..730+

>mRNA_M-pyrifera_M_contig89898.20836.1 ID=mRNA_M-pyrifera_M_contig89898.20836.1|Name=mRNA_M-pyrifera_M_contig89898.20836.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1458bp|location=Sequence derived from alignment at M-pyrifera_M_contig89898:2..730+ (Macrocystis pyrifera P11B4 male)
CAGAAACTCCCCGCATCTGTGGAACAGAAATCATTTCGCCGCCGAGTCAA
GCGATTCCTGGCAGGACTCGCGGTTCCTCCGGAACGTCGCTACCTCAAAT
GGGTCGGCATCTTTGATACAGAACGCCGACTGGAGATGTATACTCCCGAA
TTCAGAGAGCAGATCCAGAACTTCGATGCCGACCAGTTCCTGCTTGACGC
TTACCAGCTCTGTCCTGACCGCGACTTTGTGACCCGCACGACTGCGACTG
ATGTGCTGACTTATCTCCCCTGTGACATTCTGACCAAGGTAGACATTGCC
AGCATGGCGCACAGTCTGGAATGTCGCAGCCCGTTCCTGGATCATCATGT
GGCGGAACTGGCTGCAGTTATGCCCCTGGATCTAAAAATGCACAAAGGCC
GCGGCAAACAGATTCTCGTCGACACCTTTGCTGATCTCCTTCCCGAATCG
ATCCAGACACGCAAGAAAATGGGATTCGGTGTGCCCCTCAATCACTGGTT
CCGTCATGAATTGAAACCATTACTCTACGATGTTCTGCTTGACCAGCGGG
CCATCGATCGTCAGATCTTTGACCGAAAGGCTGTAGAACAGCTGATCAAC
GAACACCAGAATCAGCAATGGGATCACAGCGCCCGTCTCTGGTCACTGCT
GGTTCTGGAAATGTGGTTTCGAACCTTTATGGATCCTGCAAGCATTCCCG
ATCACTTTCCGGAAGCTGCACTGGTATGACAGAAACTCCCCGCATCTGTG
GAACAGAAATCATTTCGCCGCCGAGTCAAGCGATTCCTGGCAGGACTCGC
GGTTCCTCCGGAACGTCGCTACCTCAAATGGGTCGGCATCTTTGATACAG
AACGCCGACTGGAGATGTATACTCCCGAATTCAGAGAGCAGATCCAGAAC
TTCGATGCCGACCAGTTCCTGCTTGACGCTTACCAGCTCTGTCCTGACCG
CGACTTTGTGACCCGCACGACTGCGACTGATGTGCTGACTTATCTCCCCT
GTGACATTCTGACCAAGGTAGACATTGCCAGCATGGCGCACAGTCTGGAA
TGTCGCAGCCCGTTCCTGGATCATCATGTGGCGGAACTGGCTGCAGTTAT
GCCCCTGGATCTAAAAATGCACAAAGGCCGCGGCAAACAGATTCTCGTCG
ACACCTTTGCTGATCTCCTTCCCGAATCGATCCAGACACGCAAGAAAATG
GGATTCGGTGTGCCCCTCAATCACTGGTTCCGTCATGAATTGAAACCATT
ACTCTACGATGTTCTGCTTGACCAGCGGGCCATCGATCGTCAGATCTTTG
ACCGAAAGGCTGTAGAACAGCTGATCAACGAACACCAGAATCAGCAATGG
GATCACAGCGCCCGTCTCTGGTCACTGCTGGTTCTGGAAATGTGGTTTCG
AACCTTTATGGATCCTGCAAGCATTCCCGATCACTTTCCGGAAGCTGCAC
TGGTATGA
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