prot_M-pyrifera_M_contig89892.20834.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig89892.20834.1
Unique Nameprot_M-pyrifera_M_contig89892.20834.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length158
Homology
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BLAST of mRNA_M-pyrifera_M_contig89892.20834.1 vs. uniprot
Match: A0A3A2HYI4_9VIBR (PEP-CTERM domain-containing protein n=2 Tax=unclassified Vibrio TaxID=2614977 RepID=A0A3A2HYI4_9VIBR)

HSP 1 Score: 53.1 bits (126), Expect = 2.160e-5
Identity = 40/104 (38.46%), Postives = 51/104 (49.04%), Query Frame = 0 
Query:   65 LQYDGSEATNV-LATNGLGSVDLTVNGGIAF-------QLGLAVGIQ--EGLGASFIVTVYTNNGTQTCTWEQKLPKTDVVYHIEFQDLPSCDFTQVGAVEIII 158
            +QYDG+++  V + T GLGSVDLT+NGG AF        LG   G+Q    LGA     VYT +G  T            +  + F D    DFT V A+E  I
Sbjct:  110 IQYDGNDSDAVNIDTAGLGSVDLTLNGGDAFLLDVINTDLGFTFGVQVWSALGAETDTVVYTASGATTG-----------LAALSFSDFVGVDFTDVSAIEFTI 202
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig89892.20834.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A3A2HYI4_9VIBR2.160e-538.46PEP-CTERM domain-containing protein n=2 Tax=unclas... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig89892contigM-pyrifera_M_contig89892:28..501 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig89892.20834.1mRNA_M-pyrifera_M_contig89892.20834.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig89892 28..501 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig89892.20834.1 ID=prot_M-pyrifera_M_contig89892.20834.1|Name=mRNA_M-pyrifera_M_contig89892.20834.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
VDDFSTLQTDLVGDRLEYNSANGNMLGGNRDMILTGDGQGSGTSEGVDEG
SWSVYGHGGNGTFSLQYDGSEATNVLATNGLGSVDLTVNGGIAFQLGLAV
GIQEGLGASFIVTVYTNNGTQTCTWEQKLPKTDVVYHIEFQDLPSCDFTQ
VGAVEIII
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